RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 ARMT1Q9H993 441 aa17.01■□□□□ 0.31
PBX3-212ENST00000538998 SPC25Q9HBM1 224 aa17.01■□□□□ 0.31
PBX3-212ENST00000538998 ZHX1Q9UKY1 873 aaPredicted RBP17.01■□□□□ 0.31
PBX3-212ENST00000538998 EXOC6BQ9Y2D4 811 aa17.01■□□□□ 0.31
PBX3-212ENST00000538998 A0A0U1RQG5 324 aaPredicted RBP17■□□□□ 0.31
PBX3-212ENST00000538998 GOLIM4O00461 696 aa17■□□□□ 0.31
PBX3-212ENST00000538998 CSF2RAP15509 400 aa17■□□□□ 0.31
PBX3-212ENST00000538998 CDK7P50613 346 aa17■□□□□ 0.31
PBX3-212ENST00000538998 RAB30Q15771 203 aa17■□□□□ 0.31
PBX3-212ENST00000538998 HSP90AB4PQ58FF6 505 aa17■□□□□ 0.31
PBX3-212ENST00000538998 CEP85Q6P2H3 762 aa17■□□□□ 0.31
PBX3-212ENST00000538998 C16orf86Q6ZW13 317 aa17■□□□□ 0.31
PBX3-212ENST00000538998 IL27Q8NEV9 243 aa17■□□□□ 0.31
PBX3-212ENST00000538998 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17■□□□□ 0.31
PBX3-212ENST00000538998 DDX11Q96FC9 970 aa17■□□□□ 0.31
PBX3-212ENST00000538998 DNAJC2Q99543 621 aaKnown RBP17■□□□□ 0.31
PBX3-212ENST00000538998 MSRAQ9UJ68 235 aa17■□□□□ 0.31
PBX3-212ENST00000538998 SMCHD1A6NHR9 2005 aa16.99■□□□□ 0.31
PBX3-212ENST00000538998 PLXNA1Q9UIW2 1896 aa16.99■□□□□ 0.31
PBX3-212ENST00000538998 GRXCR1A8MXD5 290 aa16.99■□□□□ 0.31
PBX3-212ENST00000538998 TLR3O15455 904 aaKnown RBP16.99■□□□□ 0.31
PBX3-212ENST00000538998 RAD21O60216 631 aa16.99■□□□□ 0.31
PBX3-212ENST00000538998 SNAI1O95863 264 aaPredicted RBP16.99■□□□□ 0.31
PBX3-212ENST00000538998 C6orf222P0C671 652 aaPredicted RBP16.99■□□□□ 0.31
PBX3-212ENST00000538998 FAM83BQ5T0W9 1011 aa16.99■□□□□ 0.31
PBX3-212ENST00000538998 C12orf60Q5U649 245 aa16.99■□□□□ 0.31
PBX3-212ENST00000538998 SNRNP48Q6IEG0 339 aaKnown RBP16.99■□□□□ 0.31
PBX3-212ENST00000538998 ZNF467Q7Z7K2 595 aaPredicted RBP16.99■□□□□ 0.31
PBX3-212ENST00000538998 VTI1AQ96AJ9 217 aa16.99■□□□□ 0.31
PBX3-212ENST00000538998 DDRGK1Q96HY6 314 aa16.99■□□□□ 0.31
PBX3-212ENST00000538998 UHRF1Q96T88 793 aaPredicted RBP16.99■□□□□ 0.31
PBX3-212ENST00000538998 MTIF3Q9H2K0 278 aaKnown RBP16.99■□□□□ 0.31
PBX3-212ENST00000538998 ZNFX1Q9P2E3 1918 aaKnown RBP16.99■□□□□ 0.31
PBX3-212ENST00000538998 COL11A1P12107 1806 aaPredicted RBP16.98■□□□□ 0.31
PBX3-212ENST00000538998 DNAJC25-GNG10A0A024R161 153 aa16.98■□□□□ 0.31
PBX3-212ENST00000538998 MYADML2A6NDP7 307 aa16.98■□□□□ 0.31
PBX3-212ENST00000538998 ARVCFO00192 962 aa16.98■□□□□ 0.31
PBX3-212ENST00000538998 APBB1O00213 710 aa16.98■□□□□ 0.31
PBX3-212ENST00000538998 PRKAB2O43741 272 aa16.98■□□□□ 0.31
PBX3-212ENST00000538998 MBD4O95243 580 aa16.98■□□□□ 0.31
PBX3-212ENST00000538998 ASGR1P07306 291 aa16.98■□□□□ 0.31
PBX3-212ENST00000538998 ZNF365Q70YC5 407 aa16.98■□□□□ 0.31
PBX3-212ENST00000538998 RHPN1Q8TCX5 695 aa16.98■□□□□ 0.31
PBX3-212ENST00000538998 SLF1Q9BQI6 1058 aa16.98■□□□□ 0.31
PBX3-212ENST00000538998 UPF3AQ9H1J1 476 aaKnown RBP16.98■□□□□ 0.31
PBX3-212ENST00000538998 IL1RAPL2Q9NP60 686 aa16.98■□□□□ 0.31
PBX3-212ENST00000538998 CYP2D7A0A087X1C5 515 aa16.97■□□□□ 0.31
PBX3-212ENST00000538998 USP17L12C9JPN9 530 aa16.97■□□□□ 0.31
PBX3-212ENST00000538998 USP17L21D6R901 530 aa16.97■□□□□ 0.31
PBX3-212ENST00000538998 PLA2G5P39877 138 aa16.97■□□□□ 0.31
PBX3-212ENST00000538998 GJA9P57773 515 aa16.97■□□□□ 0.31
PBX3-212ENST00000538998 ACVR2BQ13705 512 aa16.97■□□□□ 0.31
PBX3-212ENST00000538998 ADGRE1Q14246 886 aa16.97■□□□□ 0.31
PBX3-212ENST00000538998 FAM126BQ8IXS8 530 aa16.97■□□□□ 0.31
PBX3-212ENST00000538998 CLASRPQ8N2M8 674 aaKnown RBP16.97■□□□□ 0.31
PBX3-212ENST00000538998 HERVK_113Q902F9 699 aa16.97■□□□□ 0.31
PBX3-212ENST00000538998 PPP1R12CQ9BZL4 782 aa16.97■□□□□ 0.31
PBX3-212ENST00000538998 ABHD16BQ9H3Z7 469 aa16.97■□□□□ 0.31
PBX3-212ENST00000538998 RAPGEFL1Q9UHV5 662 aa16.97■□□□□ 0.31
PBX3-212ENST00000538998 MYH8P13535 1937 aa16.97■□□□□ 0.31
PBX3-212ENST00000538998 ATP2A1O14983 1001 aa16.96■□□□□ 0.31
PBX3-212ENST00000538998 ACRP10323 421 aa16.96■□□□□ 0.31
PBX3-212ENST00000538998 IGFBP4P22692 258 aa16.96■□□□□ 0.31
PBX3-212ENST00000538998 ADD2P35612 726 aa16.96■□□□□ 0.31
PBX3-212ENST00000538998 CCDC85BQ15834 202 aaPredicted RBP16.96■□□□□ 0.31
PBX3-212ENST00000538998 GNASQ5JWF2 1037 aa16.96■□□□□ 0.31
PBX3-212ENST00000538998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.96■□□□□ 0.31
PBX3-212ENST00000538998 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.96■□□□□ 0.31
PBX3-212ENST00000538998 TSPYL2Q9H2G4 693 aaPredicted RBP16.96■□□□□ 0.31
PBX3-212ENST00000538998 SLC28A3Q9HAS3 691 aa16.96■□□□□ 0.31
PBX3-212ENST00000538998 IL23AQ9NPF7 189 aa16.96■□□□□ 0.31
PBX3-212ENST00000538998 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.96■□□□□ 0.31
PBX3-212ENST00000538998 SMIM22K7EJ46 135 aa16.95■□□□□ 0.3
PBX3-212ENST00000538998 ADCY6O43306 1168 aa16.95■□□□□ 0.3
PBX3-212ENST00000538998 IFIT2P09913 472 aaKnown RBP16.95■□□□□ 0.3
PBX3-212ENST00000538998 CCDC144BQ3MJ40 725 aa16.95■□□□□ 0.3
PBX3-212ENST00000538998 PRPF38AQ8NAV1 312 aaKnown RBP16.95■□□□□ 0.3
PBX3-212ENST00000538998 FAM122AQ96E09 287 aa16.95■□□□□ 0.3
PBX3-212ENST00000538998 PAG1Q9NWQ8 432 aa16.95■□□□□ 0.3
PBX3-212ENST00000538998 RIPK3Q9Y572 518 aa16.95■□□□□ 0.3
PBX3-212ENST00000538998 CTDP1Q9Y5B0 961 aaPredicted RBP16.95■□□□□ 0.3
PBX3-212ENST00000538998 ZBED9Q6R2W3 1325 aa16.95■□□□□ 0.3
PBX3-212ENST00000538998 CD4P01730 458 aa16.94■□□□□ 0.3
PBX3-212ENST00000538998 RLBP1P12271 317 aa16.94■□□□□ 0.3
PBX3-212ENST00000538998 IRX5P78411 483 aaPredicted RBP16.94■□□□□ 0.3
PBX3-212ENST00000538998 KIF1BPQ96EK5 621 aa16.94■□□□□ 0.3
PBX3-212ENST00000538998 NUP88Q99567 741 aaPredicted RBP16.94■□□□□ 0.3
PBX3-212ENST00000538998 NKX2-4Q9H2Z4 354 aa16.94■□□□□ 0.3
PBX3-212ENST00000538998 FBXO40Q9UH90 709 aa16.94■□□□□ 0.3
PBX3-212ENST00000538998 ZBED4O75132 1171 aa16.93■□□□□ 0.3
PBX3-212ENST00000538998 FGBP02675 491 aa16.93■□□□□ 0.3
PBX3-212ENST00000538998 CYP2C18P33260 490 aa16.93■□□□□ 0.3
PBX3-212ENST00000538998 NKX3-2P78367 333 aa16.93■□□□□ 0.3
PBX3-212ENST00000538998 CTR9Q6PD62 1173 aa16.93■□□□□ 0.3
PBX3-212ENST00000538998 ARMCX2Q7L311 632 aa16.93■□□□□ 0.3
PBX3-212ENST00000538998 ANKRD35Q8N283 1001 aa16.93■□□□□ 0.3
PBX3-212ENST00000538998 HIPK3Q9H422 1215 aa16.93■□□□□ 0.3
PBX3-212ENST00000538998 CXXC1Q9P0U4 656 aaPredicted RBP16.93■□□□□ 0.3
PBX3-212ENST00000538998 NYAP2Q9P242 653 aa16.93■□□□□ 0.3
PBX3-212ENST00000538998 ARPP21Q9UBL0 812 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms