RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CDC27P30260 824 aa20.02■□□□□ 0.79
CLN6-202ENST00000538696 TM4SF4P48230 202 aa20.02■□□□□ 0.79
CLN6-202ENST00000538696 CCT2P78371 535 aaKnown RBP20.02■□□□□ 0.79
CLN6-202ENST00000538696 RTN1Q16799 776 aa20.02■□□□□ 0.79
CLN6-202ENST00000538696 GPATCH4Q5T3I0 446 aaKnown RBP20.02■□□□□ 0.79
CLN6-202ENST00000538696 IFNL1Q8IU54 200 aa20.02■□□□□ 0.79
CLN6-202ENST00000538696 FAM217BQ9NTX9 383 aaPredicted RBP20.02■□□□□ 0.79
CLN6-202ENST00000538696 FBXO28Q9NVF7 368 aa20.02■□□□□ 0.79
CLN6-202ENST00000538696 SLC45A1Q9Y2W3 748 aa20.02■□□□□ 0.79
CLN6-202ENST00000538696 PDHXO00330 501 aa20.01■□□□□ 0.79
CLN6-202ENST00000538696 PLEKHA8P1O95397 391 aa20.01■□□□□ 0.79
CLN6-202ENST00000538696 GJB2P29033 226 aa20.01■□□□□ 0.79
CLN6-202ENST00000538696 INHBEP58166 350 aa20.01■□□□□ 0.79
CLN6-202ENST00000538696 SLC35G1Q2M3R5 365 aa20.01■□□□□ 0.79
CLN6-202ENST00000538696 CPVLQ9H3G5 476 aa20.01■□□□□ 0.79
CLN6-202ENST00000538696 NCOA5Q9HCD5 579 aaKnown RBP20.01■□□□□ 0.79
CLN6-202ENST00000538696 FEM1BQ9UK73 627 aa20.01■□□□□ 0.79
CLN6-202ENST00000538696 JAK2O60674 1132 aa20■□□□□ 0.79
CLN6-202ENST00000538696 PLA2G6O60733 806 aa20■□□□□ 0.79
CLN6-202ENST00000538696 FLOT1O75955 427 aa20■□□□□ 0.79
CLN6-202ENST00000538696 KIF5BP33176 963 aa20■□□□□ 0.79
CLN6-202ENST00000538696 SLC16A2P36021 539 aa20■□□□□ 0.79
CLN6-202ENST00000538696 MAP2K2P36507 400 aa20■□□□□ 0.79
CLN6-202ENST00000538696 STAT2P52630 851 aa20■□□□□ 0.79
CLN6-202ENST00000538696 NUCB2P80303 420 aa20■□□□□ 0.79
CLN6-202ENST00000538696 PABPC4Q13310 644 aaKnown RBP eCLIP20■□□□□ 0.792e-12■□□□□ 10.6
CLN6-202ENST00000538696 BTNL9Q6UXG8 535 aa20■□□□□ 0.79
CLN6-202ENST00000538696 TMTC3Q6ZXV5 915 aa20■□□□□ 0.79
CLN6-202ENST00000538696 FAM160B2Q86V87 743 aa20■□□□□ 0.79
CLN6-202ENST00000538696 SLF1Q9BQI6 1058 aa20■□□□□ 0.79
CLN6-202ENST00000538696 UBA5Q9GZZ9 404 aa20■□□□□ 0.79
CLN6-202ENST00000538696 ASCC2Q9H1I8 757 aaPredicted RBP20■□□□□ 0.79
CLN6-202ENST00000538696 ZCCHC17Q9NP64 241 aaKnown RBP20■□□□□ 0.79
CLN6-202ENST00000538696 RBM28Q9NW13 759 aaKnown RBP20■□□□□ 0.79
CLN6-202ENST00000538696 ZDHHC9Q9Y397 364 aa20■□□□□ 0.79
CLN6-202ENST00000538696 KLRF2D3W0D1 207 aa19.99■□□□□ 0.79
CLN6-202ENST00000538696 CTDNEP1O95476 244 aa19.99■□□□□ 0.79
CLN6-202ENST00000538696 OSBPP22059 807 aa19.99■□□□□ 0.79
CLN6-202ENST00000538696 IRX3P78415 501 aaPredicted RBP19.99■□□□□ 0.79
CLN6-202ENST00000538696 NBPF11Q86T75 865 aa19.99■□□□□ 0.79
CLN6-202ENST00000538696 REM2Q8IYK8 340 aaPredicted RBP19.99■□□□□ 0.79
CLN6-202ENST00000538696 NSUN7Q8NE18 718 aaKnown RBP19.99■□□□□ 0.79
CLN6-202ENST00000538696 TNPO1Q92973 898 aaKnown RBP19.99■□□□□ 0.79
CLN6-202ENST00000538696 PPP1R9AQ9ULJ8 1098 aa19.99■□□□□ 0.79
CLN6-202ENST00000538696 SPDYE16A6NNV3 312 aaPredicted RBP19.98■□□□□ 0.79
CLN6-202ENST00000538696 CYP2C8P10632 490 aa19.98■□□□□ 0.79
CLN6-202ENST00000538696 DSG3P32926 999 aa19.98■□□□□ 0.79
CLN6-202ENST00000538696 ADD1P35611 737 aaKnown RBP19.98■□□□□ 0.79
CLN6-202ENST00000538696 IKQ13123 557 aaPredicted RBP19.98■□□□□ 0.79
CLN6-202ENST00000538696 SYDE2Q5VT97 1194 aa19.98■□□□□ 0.79
CLN6-202ENST00000538696 SAMD1Q6SPF0 538 aaPredicted RBP19.98■□□□□ 0.79
CLN6-202ENST00000538696 CMTR1Q8N1G2 835 aaKnown RBP19.98■□□□□ 0.79
CLN6-202ENST00000538696 SRBD1Q8N5C6 995 aaKnown RBP19.98■□□□□ 0.79
CLN6-202ENST00000538696 CHURC1Q8WUH1 139 aa19.98■□□□□ 0.79
CLN6-202ENST00000538696 KIFC2Q96AC6 838 aa19.98■□□□□ 0.79
CLN6-202ENST00000538696 ATG4CQ96DT6 458 aa19.98■□□□□ 0.79
CLN6-202ENST00000538696 PNMA3Q9UL41 463 aa19.98■□□□□ 0.79
CLN6-202ENST00000538696 PRR12Q9ULL5 1215 aa19.98■□□□□ 0.79
CLN6-202ENST00000538696 MYPNQ86TC9 1320 aa19.97■□□□□ 0.79
CLN6-202ENST00000538696 CNTNAP5Q8WYK1 1306 aa19.97■□□□□ 0.79
CLN6-202ENST00000538696 CYTH3O43739 400 aa19.97■□□□□ 0.79
CLN6-202ENST00000538696 GNAQP50148 359 aa19.97■□□□□ 0.79
CLN6-202ENST00000538696 COG2Q14746 738 aa19.97■□□□□ 0.79
CLN6-202ENST00000538696 PPP2R5BQ15173 497 aa19.97■□□□□ 0.79
CLN6-202ENST00000538696 SMARCC2Q8TAQ2 1214 aa19.97■□□□□ 0.79
CLN6-202ENST00000538696 PARK7Q99497 189 aaKnown RBP19.97■□□□□ 0.79
CLN6-202ENST00000538696 P2RX7Q99572 595 aaKnown RBP19.97■□□□□ 0.79
CLN6-202ENST00000538696 LLPHQ9BRT6 129 aaKnown RBP19.97■□□□□ 0.79
CLN6-202ENST00000538696 ADGRA2Q96PE1 1338 aa19.96■□□□□ 0.79
CLN6-202ENST00000538696 SMCHD1A6NHR9 2005 aa19.96■□□□□ 0.79
CLN6-202ENST00000538696 CCDC196A0A1B0GTZ2 297 aa19.96■□□□□ 0.79
CLN6-202ENST00000538696 PTPDC1A2A3K4 754 aa19.96■□□□□ 0.79
CLN6-202ENST00000538696 BRD1O95696 1058 aa19.96■□□□□ 0.79
CLN6-202ENST00000538696 HERVK_113P62684 666 aa19.96■□□□□ 0.79
CLN6-202ENST00000538696 FUT2Q10981 343 aa19.96■□□□□ 0.79
CLN6-202ENST00000538696 TAF1CQ15572 869 aaPredicted RBP19.96■□□□□ 0.79
CLN6-202ENST00000538696 NFKBIBQ15653 356 aa19.96■□□□□ 0.79
CLN6-202ENST00000538696 OTUD7BQ6GQQ9 843 aa19.96■□□□□ 0.79
CLN6-202ENST00000538696 POTEEQ6S8J3 1075 aa19.96■□□□□ 0.79
CLN6-202ENST00000538696 ADGRF4Q8IZF3 695 aa19.96■□□□□ 0.79
CLN6-202ENST00000538696 DNAJC5GQ8N7S2 189 aa19.96■□□□□ 0.79
CLN6-202ENST00000538696 PRPF38AQ8NAV1 312 aaKnown RBP19.96■□□□□ 0.79
CLN6-202ENST00000538696 LZTS2Q9BRK4 669 aa19.96■□□□□ 0.79
CLN6-202ENST00000538696 SPZ1Q9BXG8 430 aa19.96■□□□□ 0.79
CLN6-202ENST00000538696 SYT1P21579 422 aa19.95■□□□□ 0.78
CLN6-202ENST00000538696 SNAP25P60880 206 aa19.95■□□□□ 0.78
CLN6-202ENST00000538696 NTRK3Q16288 839 aa19.95■□□□□ 0.78
CLN6-202ENST00000538696 FOXD4L5Q5VV16 416 aaPredicted RBP19.95■□□□□ 0.78
CLN6-202ENST00000538696 FOXD4L4Q8WXT5 416 aaPredicted RBP19.95■□□□□ 0.78
CLN6-202ENST00000538696 DDX11Q96FC9 970 aa19.95■□□□□ 0.78
CLN6-202ENST00000538696 RIOX1Q9H6W3 641 aa19.95■□□□□ 0.78
CLN6-202ENST00000538696 JMJD4Q9H9V9 463 aa19.95■□□□□ 0.78
CLN6-202ENST00000538696 ADAMTS5Q9UNA0 930 aa19.95■□□□□ 0.78
CLN6-202ENST00000538696 DHX16O60231 1041 aaKnown RBP19.94■□□□□ 0.78
CLN6-202ENST00000538696 SMARCA1P28370 1054 aa19.94■□□□□ 0.78
CLN6-202ENST00000538696 LBX2Q6XYB7 198 aa19.94■□□□□ 0.78
CLN6-202ENST00000538696 CCDC82Q8N4S0 544 aa19.94■□□□□ 0.78
CLN6-202ENST00000538696 REPS2Q8NFH8 660 aa19.94■□□□□ 0.78
CLN6-202ENST00000538696 MTMR8Q96EF0 704 aa19.94■□□□□ 0.78
CLN6-202ENST00000538696 RANBP17Q9H2T7 1088 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms