RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 SH3RF3Q8TEJ3 882 aaPredicted RBP13.51□□□□□ -0.25
CPNE8-203ENST00000538596 LRRC15Q8TF66 581 aa13.51□□□□□ -0.25
CPNE8-203ENST00000538596 SMARCC1Q92922 1105 aaPredicted RBP13.51□□□□□ -0.25
CPNE8-203ENST00000538596 ABHD10Q9NUJ1 306 aa13.51□□□□□ -0.25
CPNE8-203ENST00000538596 SEMA3EO15041 775 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 CYTH3O43739 400 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 TRAPPC10P48553 1259 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 SLC10A5Q5PT55 438 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 ZNF658Q5TYW1 1059 aaPredicted RBP13.5□□□□□ -0.25
CPNE8-203ENST00000538596 IRF2BP1Q8IU81 584 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 CNGA4Q8IV77 575 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 SLC35F6Q8N357 371 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 RASSF8Q8NHQ8 419 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 SETDB2Q96T68 719 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 NAA15Q9BXJ9 866 aaKnown RBP13.5□□□□□ -0.25
CPNE8-203ENST00000538596 KIAA1551Q9HCM1 1747 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 KIF5CO60282 957 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 KIF5BP33176 963 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 USP5P45974 858 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 SBK1Q52WX2 424 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 WWC2Q6AWC2 1192 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 AEBP2Q6ZN18 517 aaPredicted RBP13.5□□□□□ -0.25
CPNE8-203ENST00000538596 HEATR3Q7Z4Q2 680 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 GOLGA1Q92805 767 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 CHP1Q99653 195 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 SLF1Q9BQI6 1058 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 MAD2L2Q9UI95 211 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 PCDHA4Q9UN74 947 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 COL5A3P25940 1745 aaPredicted RBP13.5□□□□□ -0.25
CPNE8-203ENST00000538596 LRRC10BA6NIK2 292 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 PES1O00541 588 aaKnown RBP13.5□□□□□ -0.25
CPNE8-203ENST00000538596 UBXN1Q04323 297 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 C12orf60Q5U649 245 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 DISC1Q9NRI5 854 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 TRIM10Q9UDY6 481 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 SAP30BPQ9UHR5 308 aaKnown RBP13.5□□□□□ -0.25
CPNE8-203ENST00000538596 TFR2Q9UP52 801 aa13.5□□□□□ -0.25
CPNE8-203ENST00000538596 LAMB1P07942 1786 aa13.49□□□□□ -0.25
CPNE8-203ENST00000538596 TPM1P09493 284 aa13.49□□□□□ -0.25
CPNE8-203ENST00000538596 KRT9P35527 623 aa13.49□□□□□ -0.25
CPNE8-203ENST00000538596 CHMP4BP1P59074 171 aa13.49□□□□□ -0.25
CPNE8-203ENST00000538596 KIF4BQ2VIQ3 1234 aa13.49□□□□□ -0.25
CPNE8-203ENST00000538596 RABGGTAQ92696 567 aa13.49□□□□□ -0.25
CPNE8-203ENST00000538596 MKNK2Q9HBH9 465 aa13.49□□□□□ -0.25
CPNE8-203ENST00000538596 PCDHA6Q9UN73 950 aa13.49□□□□□ -0.25
CPNE8-203ENST00000538596 STX8Q9UNK0 236 aa13.49□□□□□ -0.25
CPNE8-203ENST00000538596 PCDHA8Q9Y5H6 950 aa13.49□□□□□ -0.25
CPNE8-203ENST00000538596 GOLGB1Q14789 3259 aaKnown RBP13.49□□□□□ -0.25
CPNE8-203ENST00000538596 CCDC194A0A1B0GVG4 234 aa13.49□□□□□ -0.25
CPNE8-203ENST00000538596 TM4SF1P30408 202 aa13.49□□□□□ -0.25
CPNE8-203ENST00000538596 LONP1P36776 959 aaKnown RBP13.49□□□□□ -0.25
CPNE8-203ENST00000538596 TGFBRAP1Q8WUH2 860 aa13.49□□□□□ -0.25
CPNE8-203ENST00000538596 MKRN1Q9UHC7 482 aaKnown RBP13.49□□□□□ -0.25
CPNE8-203ENST00000538596 ITIH6Q6UXX5 1313 aa13.49□□□□□ -0.25
CPNE8-203ENST00000538596 M0R2N6 131 aa13.48□□□□□ -0.25
CPNE8-203ENST00000538596 CALML3P27482 149 aa13.48□□□□□ -0.25
CPNE8-203ENST00000538596 TXLNAP40222 546 aa13.48□□□□□ -0.25
CPNE8-203ENST00000538596 ARL6IP4Q66PJ3 421 aaKnown RBP13.48□□□□□ -0.25
CPNE8-203ENST00000538596 DTHD1Q6ZMT9 781 aa13.48□□□□□ -0.25
CPNE8-203ENST00000538596 GNPATO15228 680 aa13.48□□□□□ -0.25
CPNE8-203ENST00000538596 PARP1P09874 1014 aaKnown RBP13.48□□□□□ -0.25
CPNE8-203ENST00000538596 ARHGAP25P42331 645 aa13.48□□□□□ -0.25
CPNE8-203ENST00000538596 SRGAP1Q7Z6B7 1085 aa13.48□□□□□ -0.25
CPNE8-203ENST00000538596 ANKRD2Q9GZV1 360 aa13.48□□□□□ -0.25
CPNE8-203ENST00000538596 ANKZF1Q9H8Y5 726 aa13.48□□□□□ -0.25
CPNE8-203ENST00000538596 ANKIB1Q9P2G1 1089 aa13.48□□□□□ -0.25
CPNE8-203ENST00000538596 CDC23Q9UJX2 597 aa13.48□□□□□ -0.25
CPNE8-203ENST00000538596 TTC26A0AVF1 554 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 TSPY3P0CV98 308 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 TSPY8P0CW00 308 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 NFIXQ14938 502 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 TMTC1Q8IUR5 882 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 MAPKAPK5Q8IW41 473 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 ADSSL1Q8N142 457 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 PNKPQ96T60 521 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 ARFGAP3Q9NP61 516 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 LDHBP07195 334 aaKnown RBP13.47□□□□□ -0.25
CPNE8-203ENST00000538596 FECHP22830 423 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 GYS2P54840 703 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 GRM4Q14833 912 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 DGKHQ86XP1 1220 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 FUT8Q9BYC5 575 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 NARFQ9UHQ1 456 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 REXO2Q9Y3B8 237 aaKnown RBP13.47□□□□□ -0.25
CPNE8-203ENST00000538596 CCDC88AQ3V6T2 1871 aa13.47□□□□□ -0.25
CPNE8-203ENST00000538596 CTAGE9A4FU28 777 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 KLRC4O43908 158 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 ZPR1O75312 459 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 OAS2P29728 719 aaKnown RBP13.46□□□□□ -0.25
CPNE8-203ENST00000538596 UBA7P41226 1012 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 CYP26C1Q6V0L0 522 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 CCDC51Q96ER9 411 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 TMEM47Q9BQJ4 181 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 SUGCTQ9HAC7 445 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 RMND1Q9NWS8 449 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 IRS2Q9Y4H2 1338 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 STXBP3O00186 592 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 NKRFO15226 690 aaKnown RBP eCLIP13.46□□□□□ -0.25
CPNE8-203ENST00000538596 RHOXF2BP0C7M4 288 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 LONRF2Q1L5Z9 754 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms