RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 WDR46O15213 610 aaKnown RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 NAA35Q5VZE5 725 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 CNNM2Q9H8M5 875 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 MTMR6Q9Y217 621 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 FGD5Q6ZNL6 1462 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 HEXIM1O94992 359 aaKnown RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 PHBP35232 272 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 HDLBPQ00341 1268 aaKnown RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 OTUD6AQ7L8S5 288 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 RSPH3Q86UC2 560 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 KIF2CQ99661 725 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 SCHIP1Q9P0W5 487 aaPredicted RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 RTEL1-TNFRSF6BF6WH68 1400 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 CALM1P0DP23 149 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 CALM2P0DP24 149 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 CALM3P0DP25 149 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 ADCY8P40145 1251 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 LIN9Q5TKA1 542 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 WDR78Q5VTH9 848 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 NAIF1Q69YI7 327 aaPredicted RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 CCDC125Q86Z20 511 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 PARD3Q8TEW0 1356 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 ZKSCAN3Q9BRR0 538 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 SIKE1Q9BRV8 207 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 EPB41L5Q9HCM4 733 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 DNAJC6O75061 913 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 LMNB2Q03252 620 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 TMEM259Q4ZIN3 620 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 RNF169Q8NCN4 708 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 SH2D4AQ9H788 454 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 SHROOM3Q8TF72 1996 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 HMGB1P1B2RPK0 211 aaPredicted RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 SUPT3HO75486 399 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 HIPK4Q8NE63 616 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 ZNF653Q96CK0 615 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 LRGUKQ96M69 825 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 ANTXR1Q9H6X2 564 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 DCTPP1Q9H773 170 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 UTP6Q9NYH9 597 aaKnown RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 TBC1D7Q9P0N9 293 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 CACNA1GO43497 2377 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 ESYT2A0FGR8 921 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 CFAP73A6NFT4 308 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 PPM1FP49593 454 aaPredicted RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 SLC7A5Q01650 507 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 OCA2Q04671 838 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 RNASELQ05823 741 aaKnown RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 PASKQ96RG2 1323 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 ENC1O14682 589 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 MMEL1Q495T6 779 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 C11orf57Q6ZUT1 292 aaPredicted RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 ATF2P15336 505 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 RXRAP19793 462 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 GGCXP38435 758 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 RAP1GDS1P52306 607 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 STRN3Q13033 797 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 CABP5Q9NP86 173 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 PACSIN2Q9UNF0 486 aaPredicted RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 WDR91A4D1P6 747 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 USP37Q86T82 979 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 SNRNP27Q8WVK2 155 aaKnown RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 PI4KAP2A4QPH2 592 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 MAPK13O15264 365 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 SLCO1A2P46721 670 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 SNX1Q13596 522 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 PI4KAP1Q8N8J0 262 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 ACRBPQ8NEB7 543 aa6.2□□□□□ -1.42
CSMD1-215ENST00000537824 EPN1Q9Y6I3 576 aaPredicted RBP6.2□□□□□ -1.42
CSMD1-215ENST00000537824 RNF123Q5XPI4 1314 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 SNUPNO95149 360 aaKnown RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 MAN1A1P33908 653 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 ART3Q13508 389 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 TMED2Q15363 201 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 OLFML2BQ68BL8 750 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 TRMT10CQ7L0Y3 403 aaKnown RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 FAM83GA6ND36 823 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 GNAT2P19087 354 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 MRPS15P82914 257 aaKnown RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 PDE4BQ07343 736 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 ELAC2Q9BQ52 826 aaKnown RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 ATP5HO75947 161 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 SYF2O95926 243 aaKnown RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 TCP1P17987 556 aaKnown RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 CCDC15Q0P6D6 951 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 ARID5BQ14865 1188 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 PAG1Q9NWQ8 432 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 GIPC1O14908 333 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 MCF2LO15068 1137 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 ANXA1P04083 346 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 MCF2P10911 925 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 PDE4DQ08499 809 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 KLHL30Q0D2K2 578 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 CYP4F22Q6NT55 531 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 ARHGAP18Q8N392 663 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 PPARGC1AQ9UBK2 798 aaKnown RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 AOX1Q06278 1338 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 PLS1Q14651 629 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 KRT79Q5XKE5 535 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 NLRP14Q86W24 1093 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 ENAHQ8N8S7 591 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms