RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 CFAP58Q5T655 872 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 WLSQ5T9L3 541 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 PPP4R3AQ6IN85 833 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 LRP10Q7Z4F1 713 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 GRAMD1CQ8IYS0 662 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 EIF1ADQ8N9N8 165 aaKnown RBP12.09□□□□□ -0.47
LMO3-215ENST00000537304 TBC1D22AQ8WUA7 517 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 NELFBQ8WX92 580 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 RIN2Q8WYP3 895 aaPredicted RBP12.09□□□□□ -0.47
LMO3-215ENST00000537304 CAPZA3Q96KX2 299 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 JPH2Q9BR39 696 aaPredicted RBP12.09□□□□□ -0.47
LMO3-215ENST00000537304 VPS16Q9H269 839 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.09□□□□□ -0.47
LMO3-215ENST00000537304 TAB2Q9NYJ8 693 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
LMO3-215ENST00000537304 HYOU1Q9Y4L1 999 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 ZNF335Q9H4Z2 1342 aaPredicted RBP12.09□□□□□ -0.47
LMO3-215ENST00000537304 GOLGA6L10A6NI86 522 aa12.08□□□□□ -0.48
LMO3-215ENST00000537304 ENC1O14682 589 aa12.08□□□□□ -0.48
LMO3-215ENST00000537304 GCFC2P16383 781 aaKnown RBP12.08□□□□□ -0.48
LMO3-215ENST00000537304 ADD2P35612 726 aa12.08□□□□□ -0.48
LMO3-215ENST00000537304 AFMP43652 599 aa12.08□□□□□ -0.48
LMO3-215ENST00000537304 ZBED6P86452 979 aa12.08□□□□□ -0.48
LMO3-215ENST00000537304 SNCBQ16143 134 aa12.08□□□□□ -0.48
LMO3-215ENST00000537304 FIGNQ5HY92 759 aa12.08□□□□□ -0.48
LMO3-215ENST00000537304 CCDC121Q6ZUS5 278 aa12.08□□□□□ -0.48
LMO3-215ENST00000537304 RNF26Q9BY78 433 aaPredicted RBP12.08□□□□□ -0.48
LMO3-215ENST00000537304 FAM217BQ9NTX9 383 aaPredicted RBP12.08□□□□□ -0.48
LMO3-215ENST00000537304 HDAC6Q9UBN7 1215 aa12.08□□□□□ -0.48
LMO3-215ENST00000537304 PCDHB6Q9Y5E3 794 aa12.08□□□□□ -0.48
LMO3-215ENST00000537304 TIAM2Q8IVF5 1701 aa12.08□□□□□ -0.48
LMO3-215ENST00000537304 PDS5AQ29RF7 1337 aaKnown RBP12.08□□□□□ -0.48
LMO3-215ENST00000537304 RTL9Q8NET4 1388 aa12.08□□□□□ -0.48
LMO3-215ENST00000537304 TNS3Q68CZ2 1445 aa12.08□□□□□ -0.48
LMO3-215ENST00000537304 A0A1W2PQJ5 194 aa12.07□□□□□ -0.48
LMO3-215ENST00000537304 TTC26A0AVF1 554 aa12.07□□□□□ -0.48
LMO3-215ENST00000537304 NUTM2BA6NNL0 878 aaPredicted RBP12.07□□□□□ -0.48
LMO3-215ENST00000537304 NUTM2EB1AL46 878 aaPredicted RBP12.07□□□□□ -0.48
LMO3-215ENST00000537304 PPP1R12AO14974 1030 aaPredicted RBP12.07□□□□□ -0.48
LMO3-215ENST00000537304 PPP1R37O75864 691 aa12.07□□□□□ -0.48
LMO3-215ENST00000537304 FAM107AO95990 144 aa12.07□□□□□ -0.48
LMO3-215ENST00000537304 LSP1P33241 339 aa12.07□□□□□ -0.48
LMO3-215ENST00000537304 KRT2P35908 639 aa12.07□□□□□ -0.48
LMO3-215ENST00000537304 TRAPPC10P48553 1259 aa12.07□□□□□ -0.48
LMO3-215ENST00000537304 NBPF9Q3BBW0 867 aa12.07□□□□□ -0.48
LMO3-215ENST00000537304 TBC1D10CQ8IV04 446 aa12.07□□□□□ -0.48
LMO3-215ENST00000537304 WHAMMQ8TF30 809 aa12.07□□□□□ -0.48
LMO3-215ENST00000537304 SYMPKQ92797 1274 aaKnown RBP12.07□□□□□ -0.48
LMO3-215ENST00000537304 DDX17Q92841 729 aaKnown RBP12.07□□□□□ -0.48
LMO3-215ENST00000537304 ZKSCAN4Q969J2 545 aaPredicted RBP12.07□□□□□ -0.48
LMO3-215ENST00000537304 AIDAQ96BJ3 306 aa12.07□□□□□ -0.48
LMO3-215ENST00000537304 PUS7LQ9H0K6 701 aaKnown RBP12.07□□□□□ -0.48
LMO3-215ENST00000537304 ODF2LQ9ULJ1 636 aa12.07□□□□□ -0.48
LMO3-215ENST00000537304 B4E1Z4 1266 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 RASSF9O75901 435 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 TFRCP02786 760 aaKnown RBP12.06□□□□□ -0.48
LMO3-215ENST00000537304 PARP1P09874 1014 aaKnown RBP12.06□□□□□ -0.48
LMO3-215ENST00000537304 PTGISQ16647 500 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 SKIDA1Q1XH10 827 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 CCDC57Q2TAC2 916 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 NAA35Q5VZE5 725 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 C8orf74Q6P047 294 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 BRINP3Q76B58 766 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 IQCA1Q86XH1 822 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 TEX11Q8IYF3 940 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 CRACR2BQ8N4Y2 399 aaPredicted RBP12.06□□□□□ -0.48
LMO3-215ENST00000537304 SPATA4Q8NEY3 305 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 ZNF473Q8WTR7 871 aaKnown RBP12.06□□□□□ -0.48
LMO3-215ENST00000537304 CCDC47Q96A33 483 aaKnown RBP12.06□□□□□ -0.48
LMO3-215ENST00000537304 CHP1Q99653 195 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 RNF41Q9H4P4 317 aaPredicted RBP12.06□□□□□ -0.48
LMO3-215ENST00000537304 SPATA31A3Q5VYP0 1347 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 PSMA7O14818 248 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 NR1D1P20393 614 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 GRIN1Q05586 938 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 C2orf54Q08AI8 447 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 PDCLQ13371 301 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 SLMAPQ14BN4 828 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 WTAPQ15007 396 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 RNF187Q5TA31 235 aaPredicted RBP12.06□□□□□ -0.48
LMO3-215ENST00000537304 LRIG3Q6UXM1 1119 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 RAPGEF4Q8WZA2 1011 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 LRRC59Q96AG4 307 aaKnown RBP12.06□□□□□ -0.48
LMO3-215ENST00000537304 MIEF2Q96C03 454 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 CABP5Q9NP86 173 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 LUC7LQ9NQ29 371 aaKnown RBP12.06□□□□□ -0.48
LMO3-215ENST00000537304 EXOC1Q9NV70 894 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 SAMM50Q9Y512 469 aa12.06□□□□□ -0.48
LMO3-215ENST00000537304 SOS2Q07890 1332 aaPredicted RBP12.06□□□□□ -0.48
LMO3-215ENST00000537304 BICDL2A1A5D9 508 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 SRGAP2O75044 1071 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 PTCD1O75127 700 aaKnown RBP12.05□□□□□ -0.48
LMO3-215ENST00000537304 ABL1P00519 1130 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 UQCRFS1P1P0C7P4 283 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 SRGNP10124 158 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 MYBL2P10244 700 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 GNAT2P19087 354 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 HOXA7P31268 230 aaPredicted RBP12.05□□□□□ -0.48
LMO3-215ENST00000537304 MDH1P40925 334 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms