RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CRKP46108 304 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 UBASH3AP57075 661 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 NONOQ15233 471 aaKnown RBP eCLIP15.4■□□□□ 0.06
SMG6-203ENST00000536871 CDC42EP5Q6NZY7 148 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 PDILTQ8N807 584 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 CCDC112Q8NEF3 446 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 GPKOWQ92917 476 aaPredicted RBP eCLIP15.4■□□□□ 0.06
SMG6-203ENST00000536871 EPSTI1Q96J88 318 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 IDI2Q9BXS1 227 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 STK32BQ9NY57 414 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 NRBP1Q9UHY1 535 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 SERPINA10Q9UK55 444 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 MYH1P12882 1939 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 KIF2AO00139 706 aaPredicted RBP15.4■□□□□ 0.06
SMG6-203ENST00000536871 CCP110O43303 1012 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 GTPBP6O43824 516 aaPredicted RBP15.4■□□□□ 0.06
SMG6-203ENST00000536871 TUBB4AP04350 444 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 LMOD1P29536 600 aaPredicted RBP15.4■□□□□ 0.06
SMG6-203ENST00000536871 PICALMQ13492 652 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 DOK7Q18PE1 504 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 CCDC144BQ3MJ40 725 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 APOBEC3HQ6NTF7 200 aaKnown RBP15.4■□□□□ 0.06
SMG6-203ENST00000536871 C4orf32Q8N8J7 132 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 CCSER1Q9C0I3 900 aa15.4■□□□□ 0.06
SMG6-203ENST00000536871 A0A087WWV3 80 aa15.39■□□□□ 0.05
SMG6-203ENST00000536871 SMCO2A6NFE2 343 aa15.39■□□□□ 0.05
SMG6-203ENST00000536871 SFPQP23246 707 aaKnown RBP eCLIP15.39■□□□□ 0.05
SMG6-203ENST00000536871 HOXA7P31268 230 aaPredicted RBP15.39■□□□□ 0.05
SMG6-203ENST00000536871 DPYDQ12882 1025 aa15.39■□□□□ 0.05
SMG6-203ENST00000536871 FILIP1Q7Z7B0 1213 aa15.39■□□□□ 0.05
SMG6-203ENST00000536871 F8W031 263 aaPredicted RBP15.38■□□□□ 0.05
SMG6-203ENST00000536871 SKILP12757 684 aa15.38■□□□□ 0.05
SMG6-203ENST00000536871 E2F4Q16254 413 aa15.38■□□□□ 0.05
SMG6-203ENST00000536871 SLC15A2Q16348 729 aa15.38■□□□□ 0.05
SMG6-203ENST00000536871 CTAGE1Q96RT6 745 aa15.38■□□□□ 0.05
SMG6-203ENST00000536871 NAP1L4Q99733 375 aaKnown RBP15.38■□□□□ 0.05
SMG6-203ENST00000536871 PI4KBQ9UBF8 816 aa15.38■□□□□ 0.05
SMG6-203ENST00000536871 COL11A2P13942 1736 aaPredicted RBP15.38■□□□□ 0.05
SMG6-203ENST00000536871 DYNC1I1O14576 645 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 CFAP100Q494V2 611 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 DACT2Q5SW24 774 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 ISM2Q6H9L7 571 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 USP17L2Q6R6M4 530 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 USP49Q70CQ1 688 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 NEK8Q86SG6 692 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 REXO1Q8N1G1 1221 aaKnown RBP15.37■□□□□ 0.05
SMG6-203ENST00000536871 HSD3B7Q9H2F3 369 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 DDX4Q9NQI0 724 aaKnown RBP15.37■□□□□ 0.05
SMG6-203ENST00000536871 SYNPO2Q9UMS6 1093 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 COL2A1P02458 1487 aaPredicted RBP15.37■□□□□ 0.05
SMG6-203ENST00000536871 FOXN1O15353 648 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 ECE2O60344 883 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 PRR29P0C7W0 189 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 CDK11BP21127 795 aaKnown RBP15.37■□□□□ 0.05
SMG6-203ENST00000536871 BMP6P22004 513 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 UBA7P41226 1012 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 SLC35G1Q2M3R5 365 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 SPATA1Q5VX52 437 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 MCTP2Q6DN12 878 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 TYW1BQ6NUM6 668 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 TMC6Q7Z403 805 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 TRIM34Q9BYJ4 488 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 FANCLQ9NW38 375 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 NFE2L3Q9Y4A8 694 aa15.37■□□□□ 0.05
SMG6-203ENST00000536871 TNS1Q9HBL0 1735 aaKnown RBP15.36■□□□□ 0.05
SMG6-203ENST00000536871 PNMA6FA0A0J9YX94 578 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 GOLGA8HP0CJ92 632 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 AKR1B1P15121 316 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 VEGFAP15692 232 aaPredicted RBP15.36■□□□□ 0.05
SMG6-203ENST00000536871 ZNF18P17022 549 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 SHMT1P34896 483 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 PPP1R2P41236 205 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 ZNF543Q08ER8 600 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 LRMPQ12912 555 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 PDXDC2PQ6P474 469 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 VSTM4Q8IW00 320 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 TEX2Q8IWB9 1127 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 MYRIPQ8NFW9 859 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 MKL1Q969V6 931 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 CCDC47Q96A33 483 aaKnown RBP15.36■□□□□ 0.05
SMG6-203ENST00000536871 VPS33BQ9H267 617 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 KANSL2Q9H9L4 492 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 DISC1Q9NRI5 854 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 PAXBP1Q9Y5B6 917 aa15.36■□□□□ 0.05
SMG6-203ENST00000536871 A0A087X0B3 334 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 USP17L5A8MUK1 530 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 WNT7AO00755 349 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 ENTPD3O75355 529 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 OR52Z1P0C646 297 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 STAT6P42226 847 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 SCNN1DP51172 638 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 SPAG1Q07617 926 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 INF2Q27J81 1249 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 NOM1Q5C9Z4 860 aaKnown RBP15.35■□□□□ 0.05
SMG6-203ENST00000536871 UTP14CQ5TAP6 766 aaKnown RBP15.35■□□□□ 0.05
SMG6-203ENST00000536871 PIGSQ96S52 555 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 RAB34Q9BZG1 259 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 NYAP2Q9P242 653 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 AFMP43652 599 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 ADCY7P51828 1080 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms