RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 CALRP27797 417 aaKnown RBP17.46■□□□□ 0.39
CHFR-213ENST00000536843 PDCLQ13371 301 aa17.46■□□□□ 0.39
CHFR-213ENST00000536843 CCDC40Q4G0X9 1142 aa17.46■□□□□ 0.39
CHFR-213ENST00000536843 TTMPQ5BVD1 217 aa17.46■□□□□ 0.39
CHFR-213ENST00000536843 SND1Q7KZF4 910 aaKnown RBP eCLIP17.46■□□□□ 0.39
CHFR-213ENST00000536843 JAKMIP2Q96AA8 810 aa17.46■□□□□ 0.39
CHFR-213ENST00000536843 NGLY1Q96IV0 654 aa17.46■□□□□ 0.39
CHFR-213ENST00000536843 AKAP11Q9UKA4 1901 aa17.46■□□□□ 0.39
CHFR-213ENST00000536843 SNAP23O00161 211 aa17.46■□□□□ 0.38
CHFR-213ENST00000536843 PDE6AP16499 860 aa17.46■□□□□ 0.38
CHFR-213ENST00000536843 FGFR2P21802 821 aa17.46■□□□□ 0.38
CHFR-213ENST00000536843 ARID4AP29374 1257 aaPredicted RBP17.46■□□□□ 0.38
CHFR-213ENST00000536843 DRP2Q13474 957 aa17.46■□□□□ 0.38
CHFR-213ENST00000536843 UBE3CQ15386 1083 aa17.46■□□□□ 0.38
CHFR-213ENST00000536843 PUM3Q15397 648 aaKnown RBP17.46■□□□□ 0.38
CHFR-213ENST00000536843 TTC19Q6DKK2 380 aaPredicted RBP17.46■□□□□ 0.38
CHFR-213ENST00000536843 CCDC70Q6NSX1 233 aa17.46■□□□□ 0.38
CHFR-213ENST00000536843 EHBP1Q8NDI1 1231 aa17.46■□□□□ 0.38
CHFR-213ENST00000536843 ACSBG1Q96GR2 724 aa17.46■□□□□ 0.38
CHFR-213ENST00000536843 ANKRD36CQ5JPF3 1778 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 NUP98P52948 1817 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 LRRC10BA6NIK2 292 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 RNF225M0QZC1 329 aaPredicted RBP17.45■□□□□ 0.38
CHFR-213ENST00000536843 UQCRFS1P1P0C7P4 283 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 CD44P16070 742 aaKnown RBP17.45■□□□□ 0.38
CHFR-213ENST00000536843 C11orf91Q3C1V1 193 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 TBC1D10CQ8IV04 446 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 LPIN2Q92539 896 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 CAPZA3Q96KX2 299 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 ANO9A1A5B4 782 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 HSPA1LP34931 641 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 CEP85LQ5SZL2 805 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 EMC10Q5UCC4 262 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 NAA35Q5VZE5 725 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 MMGT1Q8N4V1 131 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 MAGEC3Q8TD91 643 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 C8orf37Q96NL8 207 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 NUP88Q99567 741 aaPredicted RBP17.45■□□□□ 0.38
CHFR-213ENST00000536843 EPN3Q9H201 632 aa17.45■□□□□ 0.38
CHFR-213ENST00000536843 LIMA1Q9UHB6 759 aaKnown RBP17.45■□□□□ 0.38
CHFR-213ENST00000536843 MROH5Q6ZUA9 1318 aa17.44■□□□□ 0.38
CHFR-213ENST00000536843 MYH8P13535 1937 aa17.44■□□□□ 0.38
CHFR-213ENST00000536843 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
CHFR-213ENST00000536843 SH2B2O14492 632 aaPredicted RBP17.44■□□□□ 0.38
CHFR-213ENST00000536843 GRIN1Q05586 938 aa17.44■□□□□ 0.38
CHFR-213ENST00000536843 BARGINQ6ZT62 677 aa17.44■□□□□ 0.38
CHFR-213ENST00000536843 FMNL3Q8IVF7 1028 aa17.44■□□□□ 0.38
CHFR-213ENST00000536843 CCDC13Q8IYE1 715 aa17.44■□□□□ 0.38
CHFR-213ENST00000536843 FNBP4Q8N3X1 1017 aaPredicted RBP17.44■□□□□ 0.38
CHFR-213ENST00000536843 ARL8AQ96BM9 186 aa17.44■□□□□ 0.38
CHFR-213ENST00000536843 CCDC87Q9NVE4 849 aa17.44■□□□□ 0.38
CHFR-213ENST00000536843 TCRBV5S4A2TA0A5A2 114 aa17.43■□□□□ 0.38
CHFR-213ENST00000536843 PDE2AO00408 941 aaPredicted RBP17.43■□□□□ 0.38
CHFR-213ENST00000536843 KRT9P35527 623 aa17.43■□□□□ 0.38
CHFR-213ENST00000536843 TRIM29Q14134 588 aa17.43■□□□□ 0.38
CHFR-213ENST00000536843 KDM7AQ6ZMT4 941 aa17.43■□□□□ 0.38
CHFR-213ENST00000536843 CYB5R4Q7L1T6 521 aa17.43■□□□□ 0.38
CHFR-213ENST00000536843 CAGE1Q8TC20 777 aa17.43■□□□□ 0.38
CHFR-213ENST00000536843 RRP36Q96EU6 259 aaKnown RBP17.43■□□□□ 0.38
CHFR-213ENST00000536843 MYH3P11055 1940 aa17.43■□□□□ 0.38
CHFR-213ENST00000536843 LSP1P33241 339 aa17.43■□□□□ 0.38
CHFR-213ENST00000536843 CRKLP46109 303 aaKnown RBP17.43■□□□□ 0.38
CHFR-213ENST00000536843 STX17P56962 302 aa17.43■□□□□ 0.38
CHFR-213ENST00000536843 ITIH3Q06033 890 aa17.43■□□□□ 0.38
CHFR-213ENST00000536843 KLHL10Q6JEL2 608 aa17.43■□□□□ 0.38
CHFR-213ENST00000536843 EMBQ6PCB8 327 aa17.43■□□□□ 0.38
CHFR-213ENST00000536843 CHP1Q99653 195 aa17.43■□□□□ 0.38
CHFR-213ENST00000536843 MYH7P12883 1935 aa17.43■□□□□ 0.38
CHFR-213ENST00000536843 ATRNO75882 1429 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 SRRM3A6NNA2 597 aaPredicted RBP17.42■□□□□ 0.38
CHFR-213ENST00000536843 METAP2P50579 478 aaKnown RBP eCLIP17.42■□□□□ 0.38
CHFR-213ENST00000536843 EPHB4P54760 987 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 HERVK_113P62684 666 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 KRT31Q15323 416 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 ZNF572Q7Z3I7 529 aaPredicted RBP17.42■□□□□ 0.38
CHFR-213ENST00000536843 NOSTRINQ8IVI9 506 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 CCDC50Q8IVM0 306 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 STRBPQ96SI9 672 aaKnown RBP17.42■□□□□ 0.38
CHFR-213ENST00000536843 SLC40A1Q9NP59 571 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 N4BP3O15049 544 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 SLC5A1P13866 664 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 CDC25AP30304 524 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 VPS72Q15906 364 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 DDB1Q16531 1140 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 CCDC122Q5T0U0 273 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 SPATA5Q8NB90 893 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 ZNF473Q8WTR7 871 aaKnown RBP17.42■□□□□ 0.38
CHFR-213ENST00000536843 CAVIN3Q969G5 261 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 RUFY1Q96T51 708 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 ECM29Q5VYK3 1845 aa17.42■□□□□ 0.38
CHFR-213ENST00000536843 PPP1R3GB7ZBB8 358 aa17.41■□□□□ 0.38
CHFR-213ENST00000536843 HSF2BPO75031 334 aa17.41■□□□□ 0.38
CHFR-213ENST00000536843 CAMTA2O94983 1202 aa17.41■□□□□ 0.38
CHFR-213ENST00000536843 CCT6AP40227 531 aaKnown RBP17.41■□□□□ 0.38
CHFR-213ENST00000536843 TOB1P50616 345 aaPredicted RBP17.41■□□□□ 0.38
CHFR-213ENST00000536843 IRX1P78414 480 aaPredicted RBP17.41■□□□□ 0.38
CHFR-213ENST00000536843 C2orf54Q08AI8 447 aa17.41■□□□□ 0.38
CHFR-213ENST00000536843 RBM28Q9NW13 759 aaKnown RBP17.41■□□□□ 0.38
CHFR-213ENST00000536843 MYO5AQ9Y4I1 1855 aaKnown RBP17.41■□□□□ 0.38
CHFR-213ENST00000536843 RTN2O75298 545 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms