RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 RAD17O75943 681 aa25.9■■□□□ 1.74
HMGA2-206ENST00000536545 SPDYE6P0CI01 402 aa25.9■■□□□ 1.74
HMGA2-206ENST00000536545 FOXP4Q8IVH2 680 aaPredicted RBP25.9■■□□□ 1.74
HMGA2-206ENST00000536545 C4orf32Q8N8J7 132 aa25.9■■□□□ 1.74
HMGA2-206ENST00000536545 BRCA1P38398 1863 aaKnown RBP25.89■■□□□ 1.74
HMGA2-206ENST00000536545 MCM7P33993 719 aa25.89■■□□□ 1.73
HMGA2-206ENST00000536545 ZNF75DP51815 510 aa25.89■■□□□ 1.73
HMGA2-206ENST00000536545 CERKLQ49MI3 558 aaPredicted RBP25.89■■□□□ 1.73
HMGA2-206ENST00000536545 AOPEPQ8N6M6 819 aa25.89■■□□□ 1.73
HMGA2-206ENST00000536545 SYMPKQ92797 1274 aaKnown RBP25.89■■□□□ 1.73
HMGA2-206ENST00000536545 SERTAD1Q9UHV2 236 aa25.89■■□□□ 1.73
HMGA2-206ENST00000536545 HOOK1Q9UJC3 728 aaKnown RBP25.89■■□□□ 1.73
HMGA2-206ENST00000536545 A0A087X0B3 334 aa25.88■■□□□ 1.73
HMGA2-206ENST00000536545 FOXN1O15353 648 aa25.88■■□□□ 1.73
HMGA2-206ENST00000536545 TGFB2P61812 414 aa25.88■■□□□ 1.73
HMGA2-206ENST00000536545 SHROOM1Q2M3G4 852 aaPredicted RBP25.88■■□□□ 1.73
HMGA2-206ENST00000536545 EPSTI1Q96J88 318 aa25.88■■□□□ 1.73
HMGA2-206ENST00000536545 BECN2A8MW95 431 aa25.87■■□□□ 1.73
HMGA2-206ENST00000536545 ZBTB7AO95365 584 aa25.87■■□□□ 1.73
HMGA2-206ENST00000536545 POSTNQ15063 836 aa25.87■■□□□ 1.73
HMGA2-206ENST00000536545 GPATCH4Q5T3I0 446 aaKnown RBP25.87■■□□□ 1.73
HMGA2-206ENST00000536545 ARL6IP4Q66PJ3 421 aaKnown RBP25.87■■□□□ 1.73
HMGA2-206ENST00000536545 TRIM34Q9BYJ4 488 aa25.87■■□□□ 1.73
HMGA2-206ENST00000536545 VAT1LQ9HCJ6 419 aa25.87■■□□□ 1.73
HMGA2-206ENST00000536545 C6orf50Q9HD87 102 aa25.87■■□□□ 1.73
HMGA2-206ENST00000536545 GPCPD1Q9NPB8 672 aa25.87■■□□□ 1.73
HMGA2-206ENST00000536545 NYAP2Q9P242 653 aa25.87■■□□□ 1.73
HMGA2-206ENST00000536545 VWA3AA6NCI4 1184 aa25.87■■□□□ 1.73
HMGA2-206ENST00000536545 MSNP26038 577 aaKnown RBP25.87■■□□□ 1.73
HMGA2-206ENST00000536545 KRT25Q7Z3Z0 450 aa25.87■■□□□ 1.73
HMGA2-206ENST00000536545 CCDC125Q86Z20 511 aa25.87■■□□□ 1.73
HMGA2-206ENST00000536545 MKL1Q969V6 931 aa25.87■■□□□ 1.73
HMGA2-206ENST00000536545 KANSL2Q9H9L4 492 aa25.87■■□□□ 1.73
HMGA2-206ENST00000536545 SMCO2A6NFE2 343 aa25.86■■□□□ 1.73
HMGA2-206ENST00000536545 GNA11P29992 359 aa25.86■■□□□ 1.73
HMGA2-206ENST00000536545 IL17AQ16552 155 aa25.86■■□□□ 1.73
HMGA2-206ENST00000536545 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.86■■□□□ 1.73
HMGA2-206ENST00000536545 PIM2Q9P1W9 311 aa25.86■■□□□ 1.73
HMGA2-206ENST00000536545 PCDHA5Q9Y5H7 936 aa25.86■■□□□ 1.73
HMGA2-206ENST00000536545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.86■■□□□ 1.73
HMGA2-206ENST00000536545 ARFGEF1Q9Y6D6 1849 aa25.85■■□□□ 1.73
HMGA2-206ENST00000536545 ATP2B2Q01814 1243 aa25.85■■□□□ 1.73
HMGA2-206ENST00000536545 INF2Q27J81 1249 aa25.85■■□□□ 1.73
HMGA2-206ENST00000536545 NT5DC1Q5TFE4 455 aa25.85■■□□□ 1.73
HMGA2-206ENST00000536545 KANK3Q6NY19 840 aa25.85■■□□□ 1.73
HMGA2-206ENST00000536545 TMEM179Q6ZVK1 233 aa25.85■■□□□ 1.73
HMGA2-206ENST00000536545 NIM1KQ8IY84 436 aa25.85■■□□□ 1.73
HMGA2-206ENST00000536545 PDILTQ8N807 584 aa25.85■■□□□ 1.73
HMGA2-206ENST00000536545 TRIM5Q9C035 493 aa25.85■■□□□ 1.73
HMGA2-206ENST00000536545 JMJD4Q9H9V9 463 aa25.85■■□□□ 1.73
HMGA2-206ENST00000536545 HDAC9Q9UKV0 1011 aa25.85■■□□□ 1.73
HMGA2-206ENST00000536545 ZNRF3Q9ULT6 936 aa25.85■■□□□ 1.73
HMGA2-206ENST00000536545 FER1L6Q2WGJ9 1857 aa25.85■■□□□ 1.73
HMGA2-206ENST00000536545 GOLGB1Q14789 3259 aaKnown RBP25.85■■□□□ 1.73
HMGA2-206ENST00000536545 PRR29P0C7W0 189 aa25.84■■□□□ 1.73
HMGA2-206ENST00000536545 EEF2P13639 858 aaKnown RBP25.84■■□□□ 1.73
HMGA2-206ENST00000536545 CCDC96Q2M329 555 aa25.84■■□□□ 1.73
HMGA2-206ENST00000536545 PPP1R18Q6NYC8 613 aa25.84■■□□□ 1.73
HMGA2-206ENST00000536545 TMOD2Q9NZR1 351 aa25.84■■□□□ 1.73
HMGA2-206ENST00000536545 CDC25BP30305 580 aa25.84■■□□□ 1.73
HMGA2-206ENST00000536545 ADGRF4Q8IZF3 695 aa25.84■■□□□ 1.73
HMGA2-206ENST00000536545 MTMR8Q96EF0 704 aa25.84■■□□□ 1.73
HMGA2-206ENST00000536545 SEPT2Q15019 361 aa25.83■■□□□ 1.73
HMGA2-206ENST00000536545 TTBK2Q6IQ55 1244 aa25.83■■□□□ 1.73
HMGA2-206ENST00000536545 SIAH1Q8IUQ4 282 aa25.83■■□□□ 1.73
HMGA2-206ENST00000536545 DCAF4Q8WV16 495 aa25.83■■□□□ 1.73
HMGA2-206ENST00000536545 DHX58Q96C10 678 aa25.83■■□□□ 1.73
HMGA2-206ENST00000536545 CSRNP1Q96S65 589 aa25.83■■□□□ 1.73
HMGA2-206ENST00000536545 MTFR1LQ9H019 292 aa25.83■■□□□ 1.73
HMGA2-206ENST00000536545 ZNF70Q9UC06 446 aaPredicted RBP25.83■■□□□ 1.73
HMGA2-206ENST00000536545 PNMA6FA0A0J9YX94 578 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 SLFN14P0C7P3 912 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 SARSP49591 514 aaKnown RBP25.82■■□□□ 1.72
HMGA2-206ENST00000536545 ICA1Q05084 483 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 NCAPHQ15003 741 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 NONOQ15233 471 aaKnown RBP eCLIP25.82■■□□□ 1.72
HMGA2-206ENST00000536545 DLGAP5Q15398 846 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 ABCB5Q2M3G0 1257 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 SPDYE2Q495Y8 402 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 SH3RF1Q7Z6J0 888 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 GRAMD1CQ8IYS0 662 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 MAN1B1Q9UKM7 699 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 ZBTB12Q9Y330 459 aaPredicted RBP25.82■■□□□ 1.72
HMGA2-206ENST00000536545 CNTNAP1P78357 1384 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 GDF11O95390 407 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 POLD1P28340 1107 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 LONP1P36776 959 aaKnown RBP25.82■■□□□ 1.72
HMGA2-206ENST00000536545 DALRD3Q5D0E6 543 aaKnown RBP25.82■■□□□ 1.72
HMGA2-206ENST00000536545 REXO1Q8N1G1 1221 aaKnown RBP25.82■■□□□ 1.72
HMGA2-206ENST00000536545 AGBL3Q8NEM8 1001 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 SPATA20Q8TB22 786 aa25.82■■□□□ 1.72
HMGA2-206ENST00000536545 IKBKBO14920 756 aa25.81■■□□□ 1.72
HMGA2-206ENST00000536545 ZNF500O60304 480 aaPredicted RBP25.81■■□□□ 1.72
HMGA2-206ENST00000536545 PPP1R11O60927 126 aaPredicted RBP25.81■■□□□ 1.72
HMGA2-206ENST00000536545 BMP6P22004 513 aa25.81■■□□□ 1.72
HMGA2-206ENST00000536545 E2F4Q16254 413 aa25.81■■□□□ 1.72
HMGA2-206ENST00000536545 ISM2Q6H9L7 571 aa25.81■■□□□ 1.72
HMGA2-206ENST00000536545 KCTD1Q719H9 257 aa25.81■■□□□ 1.72
HMGA2-206ENST00000536545 OGFOD1Q8N543 542 aa25.81■■□□□ 1.72
HMGA2-206ENST00000536545 SPC24Q8NBT2 197 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms