RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 PCP11498 1178 aaKnown RBP24.28■■□□□ 1.48
TRIM3-214ENST00000536344 TMTC3Q6ZXV5 915 aa24.28■■□□□ 1.48
TRIM3-214ENST00000536344 PACS2Q86VP3 889 aa24.28■■□□□ 1.48
TRIM3-214ENST00000536344 MTA3Q9BTC8 594 aa24.28■■□□□ 1.48
TRIM3-214ENST00000536344 CABP5Q9NP86 173 aa24.28■■□□□ 1.48
TRIM3-214ENST00000536344 NOSTRINQ8IVI9 506 aa24.27■■□□□ 1.48
TRIM3-214ENST00000536344 DPF2Q92785 391 aa24.27■■□□□ 1.48
TRIM3-214ENST00000536344 POLR3EQ9NVU0 708 aa24.27■■□□□ 1.48
TRIM3-214ENST00000536344 SCN9AQ15858 1988 aa24.27■■□□□ 1.48
TRIM3-214ENST00000536344 SAFBQ15424 915 aaKnown RBP eCLIP24.27■■□□□ 1.48
TRIM3-214ENST00000536344 ICE2Q659A1 982 aa24.27■■□□□ 1.48
TRIM3-214ENST00000536344 WASF1Q92558 559 aa24.27■■□□□ 1.48
TRIM3-214ENST00000536344 GPKOWQ92917 476 aaPredicted RBP eCLIP24.27■■□□□ 1.48
TRIM3-214ENST00000536344 ZBTB7AO95365 584 aa24.26■■□□□ 1.47
TRIM3-214ENST00000536344 TOB1P50616 345 aaPredicted RBP24.26■■□□□ 1.47
TRIM3-214ENST00000536344 SLF2Q8IX21 1173 aa24.26■■□□□ 1.47
TRIM3-214ENST00000536344 PPP1R1BQ9UD71 204 aaPredicted RBP24.26■■□□□ 1.47
TRIM3-214ENST00000536344 CDC42EP5Q6NZY7 148 aa24.26■■□□□ 1.47
TRIM3-214ENST00000536344 ARFGAP3Q9NP61 516 aa24.26■■□□□ 1.47
TRIM3-214ENST00000536344 MYH1P12882 1939 aa24.26■■□□□ 1.47
TRIM3-214ENST00000536344 BAG6P46379 1132 aa24.26■■□□□ 1.47
TRIM3-214ENST00000536344 FAM163AQ96GL9 167 aaPredicted RBP24.26■■□□□ 1.47
TRIM3-214ENST00000536344 TMEM47Q9BQJ4 181 aa24.26■■□□□ 1.47
TRIM3-214ENST00000536344 RNF26Q9BY78 433 aaPredicted RBP24.26■■□□□ 1.47
TRIM3-214ENST00000536344 NID2Q14112 1375 aa24.25■■□□□ 1.47
TRIM3-214ENST00000536344 PLCG2P16885 1265 aa24.25■■□□□ 1.47
TRIM3-214ENST00000536344 ACTN2P35609 894 aa24.25■■□□□ 1.47
TRIM3-214ENST00000536344 GRIN1Q05586 938 aa24.25■■□□□ 1.47
TRIM3-214ENST00000536344 STYK1Q6J9G0 422 aa24.25■■□□□ 1.47
TRIM3-214ENST00000536344 MRPS27Q92552 414 aaKnown RBP24.25■■□□□ 1.47
TRIM3-214ENST00000536344 NAT10Q9H0A0 1025 aaKnown RBP24.25■■□□□ 1.47
TRIM3-214ENST00000536344 CWC15Q9P013 229 aaKnown RBP24.25■■□□□ 1.47
TRIM3-214ENST00000536344 PCDHB6Q9Y5E3 794 aa24.25■■□□□ 1.47
TRIM3-214ENST00000536344 CNTNAP5Q8WYK1 1306 aa24.25■■□□□ 1.47
TRIM3-214ENST00000536344 VWA3AA6NCI4 1184 aa24.25■■□□□ 1.47
TRIM3-214ENST00000536344 N4BP1O75113 896 aaKnown RBP24.25■■□□□ 1.47
TRIM3-214ENST00000536344 APOBEC3HQ6NTF7 200 aaKnown RBP24.25■■□□□ 1.47
TRIM3-214ENST00000536344 VPS18Q9P253 973 aa24.25■■□□□ 1.47
TRIM3-214ENST00000536344 DDAH1O94760 285 aa24.24■■□□□ 1.47
TRIM3-214ENST00000536344 NCAPHQ15003 741 aa24.24■■□□□ 1.47
TRIM3-214ENST00000536344 SHROOM1Q2M3G4 852 aaPredicted RBP24.24■■□□□ 1.47
TRIM3-214ENST00000536344 ADALQ6DHV7 355 aa24.24■■□□□ 1.47
TRIM3-214ENST00000536344 SECISBP2LQ93073 1101 aaKnown RBP24.24■■□□□ 1.47
TRIM3-214ENST00000536344 CEP95Q96GE4 821 aa24.24■■□□□ 1.47
TRIM3-214ENST00000536344 WNT7AO00755 349 aa24.24■■□□□ 1.47
TRIM3-214ENST00000536344 CRKP46108 304 aa24.24■■□□□ 1.47
TRIM3-214ENST00000536344 ATL3Q6DD88 541 aa24.24■■□□□ 1.47
TRIM3-214ENST00000536344 FMR1NBQ8N0W7 255 aaPredicted RBP24.24■■□□□ 1.47
TRIM3-214ENST00000536344 KCNG4Q8TDN1 519 aa24.24■■□□□ 1.47
TRIM3-214ENST00000536344 TEKT1Q969V4 418 aa24.24■■□□□ 1.47
TRIM3-214ENST00000536344 MAP3K14Q99558 947 aa24.24■■□□□ 1.47
TRIM3-214ENST00000536344 ATP8B1O43520 1251 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 MCM6Q14566 821 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 LONRF2Q1L5Z9 754 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 AXDND1Q5T1B0 1012 aaPredicted RBP24.23■■□□□ 1.47
TRIM3-214ENST00000536344 C16orf86Q6ZW13 317 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 CNKSR1Q969H4 720 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 EXOC4Q96A65 974 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 DRC1Q96MC2 740 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 PLEKHA4Q9H4M7 779 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 SUGCTQ9HAC7 445 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 ATF5Q9Y2D1 282 aaPredicted RBP24.23■■□□□ 1.47
TRIM3-214ENST00000536344 PPIP5K2O43314 1243 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 YEATS4O95619 227 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 SLC39A14Q15043 492 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 SLC35G1Q2M3R5 365 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 VAT1LQ9HCJ6 419 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 PDE11AQ9HCR9 933 aa24.23■■□□□ 1.47
TRIM3-214ENST00000536344 RBM28Q9NW13 759 aaKnown RBP24.23■■□□□ 1.47
TRIM3-214ENST00000536344 PRPF3O43395 683 aaKnown RBP24.22■■□□□ 1.47
TRIM3-214ENST00000536344 CALM1P0DP23 149 aa24.22■■□□□ 1.47
TRIM3-214ENST00000536344 CALM2P0DP24 149 aa24.22■■□□□ 1.47
TRIM3-214ENST00000536344 CALM3P0DP25 149 aa24.22■■□□□ 1.47
TRIM3-214ENST00000536344 FANCCQ00597 558 aa24.22■■□□□ 1.47
TRIM3-214ENST00000536344 PTPAQ15257 358 aa24.22■■□□□ 1.47
TRIM3-214ENST00000536344 WWC2Q6AWC2 1192 aa24.22■■□□□ 1.47
TRIM3-214ENST00000536344 USP17L2Q6R6M4 530 aa24.22■■□□□ 1.47
TRIM3-214ENST00000536344 PODNQ7Z5L7 613 aa24.22■■□□□ 1.47
TRIM3-214ENST00000536344 C7orf43Q8WVR3 580 aa24.22■■□□□ 1.47
TRIM3-214ENST00000536344 PPP2R3AQ06190 1150 aa24.22■■□□□ 1.47
TRIM3-214ENST00000536344 GPR161Q8N6U8 529 aaKnown RBP24.22■■□□□ 1.47
TRIM3-214ENST00000536344 KIAA1468Q9P260 1216 aa24.22■■□□□ 1.47
TRIM3-214ENST00000536344 DDX60LQ5H9U9 1706 aaKnown RBP24.22■■□□□ 1.47
TRIM3-214ENST00000536344 SNED1Q8TER0 1413 aa24.21■■□□□ 1.47
TRIM3-214ENST00000536344 TMEM232C9JQI7 657 aa24.21■■□□□ 1.47
TRIM3-214ENST00000536344 DPEP1P16444 411 aa24.21■■□□□ 1.47
TRIM3-214ENST00000536344 ATP2B2Q01814 1243 aa24.21■■□□□ 1.47
TRIM3-214ENST00000536344 AKR1B1P15121 316 aa24.21■■□□□ 1.47
TRIM3-214ENST00000536344 GNG11P61952 73 aa24.21■■□□□ 1.47
TRIM3-214ENST00000536344 TMED8Q6PL24 325 aaPredicted RBP24.21■■□□□ 1.47
TRIM3-214ENST00000536344 LRRC47Q8N1G4 583 aaKnown RBP24.21■■□□□ 1.47
TRIM3-214ENST00000536344 RASGRP4Q8TDF6 673 aa24.21■■□□□ 1.47
TRIM3-214ENST00000536344 HSD3B7Q9H2F3 369 aa24.21■■□□□ 1.47
TRIM3-214ENST00000536344 ZNF277Q9NRM2 450 aaPredicted RBP24.21■■□□□ 1.47
TRIM3-214ENST00000536344 ROBO3Q96MS0 1386 aa24.21■■□□□ 1.47
TRIM3-214ENST00000536344 YDJCA8MPS7 323 aa24.2■■□□□ 1.47
TRIM3-214ENST00000536344 PFKFB1P16118 471 aa24.2■■□□□ 1.47
TRIM3-214ENST00000536344 KCNJ6P48051 423 aa24.2■■□□□ 1.47
TRIM3-214ENST00000536344 RCAN1P53805 252 aa24.2■■□□□ 1.47
TRIM3-214ENST00000536344 DACT2Q5SW24 774 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms