RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 CEP95Q96GE4 821 aa14.93□□□□□ -0.02
DDB1-207ENST00000535967 MTMR4Q9NYA4 1195 aa14.93□□□□□ -0.02
DDB1-207ENST00000535967 A0A1W2PRG0 241 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 SLC27A2O14975 620 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 NOVP48745 357 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 CCDC178Q5BJE1 867 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 CREB3L3Q68CJ9 461 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 RALYLQ86SE5 291 aaKnown RBP14.92□□□□□ -0.02
DDB1-207ENST00000535967 ANKRD13CQ8N6S4 541 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 NCOA7Q8NI08 942 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 SMCR8Q8TEV9 937 aaPredicted RBP14.92□□□□□ -0.02
DDB1-207ENST00000535967 LRCH3Q96II8 777 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 VCPKMTQ9H867 229 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 GOPCQ9HD26 462 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 INCENPQ9NQS7 918 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 PAK6Q9NQU5 681 aaPredicted RBP14.92□□□□□ -0.02
DDB1-207ENST00000535967 TSHZ2Q9NRE2 1034 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 PNMA3Q9UL41 463 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 BOLA1Q9Y3E2 137 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 NR2E3Q9Y5X4 410 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 PLXNB2O15031 1838 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 B4E1Z4 1266 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 E7EWF7 191 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 KDM4AO75164 1064 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 IRF5Q13568 498 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 ZYXQ15942 572 aaKnown RBP14.92□□□□□ -0.02
DDB1-207ENST00000535967 IQCA1Q86XH1 822 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 SIAH1Q8IUQ4 282 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 PXYLP1Q8TE99 480 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 MKL1Q969V6 931 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 EMILIN3Q9NT22 766 aa14.92□□□□□ -0.02
DDB1-207ENST00000535967 EVI5O60447 810 aa14.91□□□□□ -0.02
DDB1-207ENST00000535967 TFRCP02786 760 aaKnown RBP14.91□□□□□ -0.02
DDB1-207ENST00000535967 VCAM1P19320 739 aa14.91□□□□□ -0.02
DDB1-207ENST00000535967 HOXA7P31268 230 aaPredicted RBP14.91□□□□□ -0.02
DDB1-207ENST00000535967 ATP2B2Q01814 1243 aa14.91□□□□□ -0.02
DDB1-207ENST00000535967 PAWRQ96IZ0 340 aaKnown RBP14.91□□□□□ -0.02
DDB1-207ENST00000535967 CRISPLD2Q9H0B8 497 aa14.91□□□□□ -0.02
DDB1-207ENST00000535967 IL17RBQ9NRM6 502 aa14.91□□□□□ -0.02
DDB1-207ENST00000535967 MYH6P13533 1939 aa14.9□□□□□ -0.02
DDB1-207ENST00000535967 WDR46O15213 610 aaKnown RBP14.9□□□□□ -0.02
DDB1-207ENST00000535967 ZKSCAN1P17029 563 aaPredicted RBP14.9□□□□□ -0.02
DDB1-207ENST00000535967 TRIM32Q13049 653 aa14.9□□□□□ -0.02
DDB1-207ENST00000535967 KRT32Q14532 448 aa14.9□□□□□ -0.02
DDB1-207ENST00000535967 TSGA10IPQ3SY00 556 aa14.9□□□□□ -0.02
DDB1-207ENST00000535967 STOX1Q6ZVD7 989 aa14.9□□□□□ -0.02
DDB1-207ENST00000535967 GMCL1P1Q8NEA9 526 aa14.9□□□□□ -0.02
DDB1-207ENST00000535967 TTC14Q96N46 770 aa14.9□□□□□ -0.02
DDB1-207ENST00000535967 CLIP2Q9UDT6 1046 aa14.9□□□□□ -0.02
DDB1-207ENST00000535967 STX8Q9UNK0 236 aa14.9□□□□□ -0.02
DDB1-207ENST00000535967 USP17L15C9J2P7 530 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 USP17L13C9JLJ4 530 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 USP17L11C9JVI0 530 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 USP17L18D6R9N7 530 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 USP17L22D6RA61 530 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 USP17L17D6RBQ6 530 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 USP17L19D6RCP7 530 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 USP17L20D6RJB6 530 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 MCCP23508 829 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 HSPA4P34932 840 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 USP17L24Q0WX57 530 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 DGKHQ86XP1 1220 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 KCNB2Q92953 911 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 UBAC1Q9BSL1 405 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 MTA3Q9BTC8 594 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.89□□□□□ -0.03
DDB1-207ENST00000535967 ZSWIM5Q9P217 1185 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 TAF6LQ9Y6J9 622 aa14.89□□□□□ -0.03
DDB1-207ENST00000535967 NMT2O60551 498 aa14.88□□□□□ -0.03
DDB1-207ENST00000535967 PEX10O60683 326 aa14.88□□□□□ -0.03
DDB1-207ENST00000535967 TOP1P11387 765 aaKnown RBP14.88□□□□□ -0.03
DDB1-207ENST00000535967 IRX3P78415 501 aaPredicted RBP14.88□□□□□ -0.03
DDB1-207ENST00000535967 FAM110CQ1W6H9 321 aa14.88□□□□□ -0.03
DDB1-207ENST00000535967 MB21D2Q8IYB1 491 aaPredicted RBP14.88□□□□□ -0.03
DDB1-207ENST00000535967 GTF3C2Q8WUA4 911 aaPredicted RBP14.88□□□□□ -0.03
DDB1-207ENST00000535967 ZSCAN10Q96SZ4 725 aaPredicted RBP14.88□□□□□ -0.03
DDB1-207ENST00000535967 RPAP3Q9H6T3 665 aaPredicted RBP14.88□□□□□ -0.03
DDB1-207ENST00000535967 TNKSO95271 1327 aa14.88□□□□□ -0.03
DDB1-207ENST00000535967 F5H6K3 240 aa14.87□□□□□ -0.03
DDB1-207ENST00000535967 KLRC3Q07444 240 aa14.87□□□□□ -0.03
DDB1-207ENST00000535967 SART3Q15020 963 aaKnown RBP14.87□□□□□ -0.03
DDB1-207ENST00000535967 C8orf34Q49A92 452 aa14.87□□□□□ -0.03
DDB1-207ENST00000535967 RCSD1Q6JBY9 416 aa14.87□□□□□ -0.03
DDB1-207ENST00000535967 CYB5R4Q7L1T6 521 aa14.87□□□□□ -0.03
DDB1-207ENST00000535967 LRRC47Q8N1G4 583 aaKnown RBP14.87□□□□□ -0.03
DDB1-207ENST00000535967 ANKS1AQ92625 1134 aa14.87□□□□□ -0.03
DDB1-207ENST00000535967 COA7Q96BR5 231 aa14.87□□□□□ -0.03
DDB1-207ENST00000535967 USP26Q9BXU7 913 aa14.87□□□□□ -0.03
DDB1-207ENST00000535967 ASCC2Q9H1I8 757 aaPredicted RBP14.87□□□□□ -0.03
DDB1-207ENST00000535967 ZMYND8Q9ULU4 1186 aaPredicted RBP14.87□□□□□ -0.03
DDB1-207ENST00000535967 WDR19Q8NEZ3 1342 aa14.87□□□□□ -0.03
DDB1-207ENST00000535967 A0A1W2PPC1 479 aa14.86□□□□□ -0.03
DDB1-207ENST00000535967 ERICH2A1L162 156 aa14.86□□□□□ -0.03
DDB1-207ENST00000535967 NDUFB10O96000 172 aa14.86□□□□□ -0.03
DDB1-207ENST00000535967 MCM5P33992 734 aa14.86□□□□□ -0.03
DDB1-207ENST00000535967 GCLCP48506 637 aaPredicted RBP14.86□□□□□ -0.03
DDB1-207ENST00000535967 CATSPERGQ6ZRH7 1159 aa14.86□□□□□ -0.03
DDB1-207ENST00000535967 ENAHQ8N8S7 591 aaPredicted RBP14.86□□□□□ -0.03
DDB1-207ENST00000535967 SLC17A8Q8NDX2 589 aa14.86□□□□□ -0.03
DDB1-207ENST00000535967 GMCL1Q96IK5 515 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms