RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 PRPF38AQ8NAV1 312 aaKnown RBP18.13■□□□□ 0.49
CNN1-202ENST00000535659 LZTS2Q9BRK4 669 aa18.13■□□□□ 0.49
CNN1-202ENST00000535659 UBA5Q9GZZ9 404 aa18.13■□□□□ 0.49
CNN1-202ENST00000535659 IGF2BP3O00425 579 aaKnown RBP eCLIP18.13■□□□□ 0.49
CNN1-202ENST00000535659 LARGE1O95461 756 aa18.13■□□□□ 0.49
CNN1-202ENST00000535659 SMARCA1P28370 1054 aa18.13■□□□□ 0.49
CNN1-202ENST00000535659 CDC27P30260 824 aa18.13■□□□□ 0.49
CNN1-202ENST00000535659 SLC16A2P36021 539 aa18.13■□□□□ 0.49
CNN1-202ENST00000535659 STAT2P52630 851 aa18.13■□□□□ 0.49
CNN1-202ENST00000535659 IKQ13123 557 aaPredicted RBP18.13■□□□□ 0.49
CNN1-202ENST00000535659 P2RX7Q99572 595 aaKnown RBP18.13■□□□□ 0.49
CNN1-202ENST00000535659 ASCC2Q9H1I8 757 aaPredicted RBP18.13■□□□□ 0.49
CNN1-202ENST00000535659 ZCCHC17Q9NP64 241 aaKnown RBP18.13■□□□□ 0.49
CNN1-202ENST00000535659 SH2B1Q9NRF2 756 aaPredicted RBP18.13■□□□□ 0.49
CNN1-202ENST00000535659 FBXO28Q9NVF7 368 aa18.13■□□□□ 0.49
CNN1-202ENST00000535659 NID2Q14112 1375 aa18.12■□□□□ 0.49
CNN1-202ENST00000535659 IRX3P78415 501 aaPredicted RBP18.12■□□□□ 0.49
CNN1-202ENST00000535659 SCRN1Q12765 414 aa18.12■□□□□ 0.49
CNN1-202ENST00000535659 NECAB1Q8N987 351 aa18.12■□□□□ 0.49
CNN1-202ENST00000535659 TMX3Q96JJ7 454 aa18.12■□□□□ 0.49
CNN1-202ENST00000535659 SLF1Q9BQI6 1058 aa18.12■□□□□ 0.49
CNN1-202ENST00000535659 NCOA5Q9HCD5 579 aaKnown RBP18.12■□□□□ 0.49
CNN1-202ENST00000535659 PNMA3Q9UL41 463 aa18.12■□□□□ 0.49
CNN1-202ENST00000535659 DHX16O60231 1041 aaKnown RBP18.11■□□□□ 0.49
CNN1-202ENST00000535659 DSG3P32926 999 aa18.11■□□□□ 0.49
CNN1-202ENST00000535659 TMTC3Q6ZXV5 915 aa18.11■□□□□ 0.49
CNN1-202ENST00000535659 NBPF11Q86T75 865 aa18.11■□□□□ 0.49
CNN1-202ENST00000535659 CMTR1Q8N1G2 835 aaKnown RBP18.11■□□□□ 0.49
CNN1-202ENST00000535659 SRBD1Q8N5C6 995 aaKnown RBP18.11■□□□□ 0.49
CNN1-202ENST00000535659 KIFC2Q96AC6 838 aa18.11■□□□□ 0.49
CNN1-202ENST00000535659 CPVLQ9H3G5 476 aa18.11■□□□□ 0.49
CNN1-202ENST00000535659 VAT1LQ9HCJ6 419 aa18.11■□□□□ 0.49
CNN1-202ENST00000535659 PPP1R9AQ9ULJ8 1098 aa18.11■□□□□ 0.49
CNN1-202ENST00000535659 PRR12Q9ULL5 1215 aa18.11■□□□□ 0.49
CNN1-202ENST00000535659 MYPNQ86TC9 1320 aa18.1■□□□□ 0.49
CNN1-202ENST00000535659 PLEKHA8P1O95397 391 aa18.1■□□□□ 0.49
CNN1-202ENST00000535659 ALDH1A1P00352 501 aa18.1■□□□□ 0.49
CNN1-202ENST00000535659 SYDE2Q5VT97 1194 aa18.1■□□□□ 0.49
CNN1-202ENST00000535659 SAMD1Q6SPF0 538 aaPredicted RBP18.1■□□□□ 0.49
CNN1-202ENST00000535659 ADGRF4Q8IZF3 695 aa18.1■□□□□ 0.49
CNN1-202ENST00000535659 CCDC82Q8N4S0 544 aa18.1■□□□□ 0.49
CNN1-202ENST00000535659 GTF3C6Q969F1 213 aa18.1■□□□□ 0.49
CNN1-202ENST00000535659 RIOX1Q9H6W3 641 aa18.1■□□□□ 0.49
CNN1-202ENST00000535659 ADAMTS5Q9UNA0 930 aa18.1■□□□□ 0.49
CNN1-202ENST00000535659 CPLX1O14810 134 aa18.09■□□□□ 0.49
CNN1-202ENST00000535659 CYP2C8P10632 490 aa18.09■□□□□ 0.49
CNN1-202ENST00000535659 NTRK3Q16288 839 aa18.09■□□□□ 0.49
CNN1-202ENST00000535659 SPZ1Q9BXG8 430 aa18.09■□□□□ 0.49
CNN1-202ENST00000535659 SPDYE16A6NNV3 312 aaPredicted RBP18.08■□□□□ 0.49
CNN1-202ENST00000535659 CYTH3O43739 400 aa18.08■□□□□ 0.49
CNN1-202ENST00000535659 FDX1P10109 184 aa18.08■□□□□ 0.49
CNN1-202ENST00000535659 IFNAR1P17181 557 aa18.08■□□□□ 0.49
CNN1-202ENST00000535659 HERVK_113P62684 666 aa18.08■□□□□ 0.49
CNN1-202ENST00000535659 FUT2Q10981 343 aa18.08■□□□□ 0.49
CNN1-202ENST00000535659 SLC35G1Q2M3R5 365 aa18.08■□□□□ 0.49
CNN1-202ENST00000535659 CPLX2Q6PUV4 134 aaKnown RBP18.08■□□□□ 0.49
CNN1-202ENST00000535659 ATG4CQ96DT6 458 aa18.08■□□□□ 0.49
CNN1-202ENST00000535659 PARK7Q99497 189 aaKnown RBP18.08■□□□□ 0.49
CNN1-202ENST00000535659 JMJD4Q9H9V9 463 aa18.08■□□□□ 0.49
CNN1-202ENST00000535659 TSHZ2Q9NRE2 1034 aa18.08■□□□□ 0.49
CNN1-202ENST00000535659 K7ELQ4 463 aaPredicted RBP18.08■□□□□ 0.48
CNN1-202ENST00000535659 VWA5AO00534 786 aa18.08■□□□□ 0.48
CNN1-202ENST00000535659 ZBED4O75132 1171 aa18.08■□□□□ 0.48
CNN1-202ENST00000535659 TAF1CQ15572 869 aaPredicted RBP18.08■□□□□ 0.48
CNN1-202ENST00000535659 LBX2Q6XYB7 198 aa18.08■□□□□ 0.48
CNN1-202ENST00000535659 CCDC83Q8IWF9 413 aa18.08■□□□□ 0.48
CNN1-202ENST00000535659 HSCBQ8IWL3 235 aa18.08■□□□□ 0.48
CNN1-202ENST00000535659 V9GY48 417 aaPredicted RBP18.08■□□□□ 0.48
CNN1-202ENST00000535659 SMCR8Q8TEV9 937 aaPredicted RBP18.07■□□□□ 0.48
CNN1-202ENST00000535659 MTMR8Q96EF0 704 aa18.07■□□□□ 0.48
CNN1-202ENST00000535659 SLC38A10Q9HBR0 1119 aa18.07■□□□□ 0.48
CNN1-202ENST00000535659 ZFYVE28Q9HCC9 887 aa18.07■□□□□ 0.48
CNN1-202ENST00000535659 CTDP1Q9Y5B0 961 aaPredicted RBP18.07■□□□□ 0.48
CNN1-202ENST00000535659 CA12O43570 354 aa18.06■□□□□ 0.48
CNN1-202ENST00000535659 CDKL5O76039 1030 aa18.06■□□□□ 0.48
CNN1-202ENST00000535659 CTDNEP1O95476 244 aa18.06■□□□□ 0.48
CNN1-202ENST00000535659 GCLCP48506 637 aaPredicted RBP18.06■□□□□ 0.48
CNN1-202ENST00000535659 SNAP25P60880 206 aa18.06■□□□□ 0.48
CNN1-202ENST00000535659 ST3GAL1Q11201 340 aa18.06■□□□□ 0.48
CNN1-202ENST00000535659 POTEEQ6S8J3 1075 aa18.06■□□□□ 0.48
CNN1-202ENST00000535659 MB21D1Q8N884 522 aa18.06■□□□□ 0.48
CNN1-202ENST00000535659 GTF3C2Q8WUA4 911 aaPredicted RBP18.06■□□□□ 0.48
CNN1-202ENST00000535659 RRP36Q96EU6 259 aaKnown RBP18.06■□□□□ 0.48
CNN1-202ENST00000535659 PIGSQ96S52 555 aa18.06■□□□□ 0.48
CNN1-202ENST00000535659 RANBP17Q9H2T7 1088 aaKnown RBP18.06■□□□□ 0.48
CNN1-202ENST00000535659 RBPJLQ9UBG7 517 aa18.06■□□□□ 0.48
CNN1-202ENST00000535659 THSD7BQ9C0I4 1608 aa18.05■□□□□ 0.48
CNN1-202ENST00000535659 PRPF3O43395 683 aaKnown RBP18.05■□□□□ 0.48
CNN1-202ENST00000535659 SSRP1Q08945 709 aaKnown RBP18.05■□□□□ 0.48
CNN1-202ENST00000535659 PHKBQ93100 1093 aa18.05■□□□□ 0.48
CNN1-202ENST00000535659 LLPHQ9BRT6 129 aaKnown RBP18.05■□□□□ 0.48
CNN1-202ENST00000535659 RNF186Q9NXI6 227 aa18.05■□□□□ 0.48
CNN1-202ENST00000535659 RABGAP1Q9Y3P9 1069 aa18.05■□□□□ 0.48
CNN1-202ENST00000535659 PNMA6FA0A0J9YX94 578 aa18.04■□□□□ 0.48
CNN1-202ENST00000535659 ZBTB5O15062 677 aa18.04■□□□□ 0.48
CNN1-202ENST00000535659 TLR2O60603 784 aa18.04■□□□□ 0.48
CNN1-202ENST00000535659 PPFIA3O75145 1194 aa18.04■□□□□ 0.48
CNN1-202ENST00000535659 AKAP17AQ02040 695 aaKnown RBP18.04■□□□□ 0.48
CNN1-202ENST00000535659 CUL4AQ13619 759 aa18.04■□□□□ 0.48
CNN1-202ENST00000535659 CDC37Q16543 378 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms