RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 TRIM21P19474 475 aaKnown RBP15.64■□□□□ 0.09
LPCAT3-203ENST00000535479 ERCC5P28715 1186 aaPredicted RBP15.64■□□□□ 0.09
LPCAT3-203ENST00000535479 DYMQ7RTS9 669 aa15.64■□□□□ 0.09
LPCAT3-203ENST00000535479 SPATA20Q8TB22 786 aa15.64■□□□□ 0.09
LPCAT3-203ENST00000535479 MCM9Q9NXL9 1143 aa15.64■□□□□ 0.09
LPCAT3-203ENST00000535479 EPHB6O15197 1021 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 IBSPP21815 317 aaPredicted RBP15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 EIF6P56537 245 aaKnown RBP15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 LRRC41Q15345 812 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 GRIK5Q16478 980 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 PDXDC2PQ6P474 469 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 HDXQ7Z353 690 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 IQCA1Q86XH1 822 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 CLEC10AQ8IUN9 316 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 TXLNBQ8N3L3 684 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 CTCFLQ8NI51 663 aaPredicted RBP15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 STK36Q9NRP7 1315 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 MYH7P12883 1935 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 XBP1P17861 261 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 ARID5AQ03989 594 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 GPS2Q13227 327 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 WDR59Q6PJI9 974 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 SH3RF1Q7Z6J0 888 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 IQUBQ8NA54 791 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 SLC39A2Q9NP94 309 aa15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 RRP15Q9Y3B9 282 aaKnown RBP15.63■□□□□ 0.09
LPCAT3-203ENST00000535479 MROH5Q6ZUA9 1318 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 LAMB4A4D0S4 1761 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 PHRF1Q9P1Y6 1649 aaKnown RBP15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 ITPK1Q13572 414 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 E2F4Q16254 413 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 LETM2Q2VYF4 491 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 CNGA4Q8IV77 575 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 RIOK1Q9BRS2 568 aaKnown RBP15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 RNF26Q9BY78 433 aaPredicted RBP15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 TBC1D7Q9P0N9 293 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 COL5A2P05997 1499 aaPredicted RBP15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 CNTNAP5Q8WYK1 1306 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 ESYT3A0FGR9 886 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 GOLGA6L9A6NEM1 432 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 MAP2K7O14733 419 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 BUB1O43683 1085 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 RNF40O75150 1001 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 MECOMQ03112 1051 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 TMTC3Q6ZXV5 915 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 LRWD1Q9UFC0 647 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 COL18A1P39060 1754 aa15.62■□□□□ 0.09
LPCAT3-203ENST00000535479 COL1A1P02452 1464 aaPredicted RBP15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 ZSCAN5CA6NGD5 496 aaPredicted RBP15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 RAD21O60216 631 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 CACNB1Q02641 598 aaPredicted RBP15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 ALX1Q15699 326 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 SLC35G1Q2M3R5 365 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 HSP90B2PQ58FF3 399 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 CYP26C1Q6V0L0 522 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 AK7Q96M32 723 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 SLAIN2Q9P270 581 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 ZNF335Q9H4Z2 1342 aaPredicted RBP15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 GGCXP38435 758 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 TFAP4Q01664 338 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 STK4Q13043 487 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 NKX1-1Q15270 411 aaPredicted RBP15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 TAF3Q5VWG9 929 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 KCTD16Q68DU8 428 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 LEKR1Q6ZMV7 388 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 ZNF34Q8IZ26 560 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 CEP112Q8N8E3 955 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 COG1Q8WTW3 980 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 BRMS1Q9HCU9 246 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 SCG2P13521 617 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 NAALADL2Q58DX5 795 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 KANK3Q6NY19 840 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 MS4A14Q96JA4 679 aa15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 RNF41Q9H4P4 317 aaPredicted RBP15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 PACSIN2Q9UNF0 486 aaPredicted RBP15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 LUC7L2Q9Y383 392 aaKnown RBP15.61■□□□□ 0.09
LPCAT3-203ENST00000535479 MYH13Q9UKX3 1938 aa15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 CDHR2Q9BYE9 1310 aa15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 MOCS3O95396 460 aa15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 IDEP14735 1019 aa15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 TECP42680 631 aa15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 NAP1L1P55209 391 aaKnown RBP15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 ATP2C1P98194 919 aaPredicted RBP15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 CCDC96Q2M329 555 aa15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 JAKMIP2Q96AA8 810 aa15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 GSDMAQ96QA5 445 aa15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 UBA5Q9GZZ9 404 aa15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 ALS2Q96Q42 1657 aa15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 MTIF2P46199 727 aaKnown RBP15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 CCDC152Q4G0S7 254 aa15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 NFRKBQ6P4R8 1299 aa15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 ZNF579Q8NAF0 562 aaKnown RBP15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 TMEM260Q9NX78 707 aa15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 SRP68Q9UHB9 627 aaKnown RBP15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 SAMM50Q9Y512 469 aa15.6■□□□□ 0.09
LPCAT3-203ENST00000535479 TULP2O00295 520 aa15.59■□□□□ 0.09
LPCAT3-203ENST00000535479 PRPF3O43395 683 aaKnown RBP15.59■□□□□ 0.09
LPCAT3-203ENST00000535479 ACTN2P35609 894 aa15.59■□□□□ 0.09
LPCAT3-203ENST00000535479 INTS5Q6P9B9 1019 aaKnown RBP15.59■□□□□ 0.09
LPCAT3-203ENST00000535479 CSGALNACT2Q8N6G5 542 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms