RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 HIF3AQ9Y2N7 669 aa6.93□□□□□ -1.3
ATM-224ENST00000534625 ADAMTS7Q9UKP4 1686 aa6.93□□□□□ -1.3
ATM-224ENST00000534625 KCPQ6ZWJ8 1503 aa6.92□□□□□ -1.3
ATM-224ENST00000534625 GNAT3A8MTJ3 354 aa6.92□□□□□ -1.3
ATM-224ENST00000534625 POLRMTO00411 1230 aaKnown RBP6.92□□□□□ -1.3
ATM-224ENST00000534625 U2SURPO15042 1029 aaKnown RBP6.92□□□□□ -1.3
ATM-224ENST00000534625 NDUFB5O43674 189 aa6.92□□□□□ -1.3
ATM-224ENST00000534625 DRD2P14416 443 aa6.92□□□□□ -1.3
ATM-224ENST00000534625 EXOSC6Q5RKV6 272 aaKnown RBP6.92□□□□□ -1.3
ATM-224ENST00000534625 PHACTR3Q96KR7 559 aa6.92□□□□□ -1.3
ATM-224ENST00000534625 CITED4Q96RK1 184 aa6.92□□□□□ -1.3
ATM-224ENST00000534625 KCNF1Q9H3M0 494 aa6.92□□□□□ -1.3
ATM-224ENST00000534625 ADGRE2Q9UHX3 823 aa6.92□□□□□ -1.3
ATM-224ENST00000534625 ZBTB1Q9Y2K1 713 aa6.92□□□□□ -1.3
ATM-224ENST00000534625 MAP4P27816 1152 aaKnown RBP6.91□□□□□ -1.3
ATM-224ENST00000534625 NFIXQ14938 502 aa6.91□□□□□ -1.3
ATM-224ENST00000534625 ARHGAP27Q6ZUM4 889 aa6.91□□□□□ -1.3
ATM-224ENST00000534625 C12orf50Q8NA57 414 aaPredicted RBP6.91□□□□□ -1.3
ATM-224ENST00000534625 SHKBP1Q8TBC3 707 aa6.91□□□□□ -1.3
ATM-224ENST00000534625 ZNF526Q8TF50 670 aaPredicted RBP6.91□□□□□ -1.3
ATM-224ENST00000534625 ZNF496Q96IT1 587 aaPredicted RBP6.91□□□□□ -1.3
ATM-224ENST00000534625 CYP4F12Q9HCS2 524 aa6.91□□□□□ -1.3
ATM-224ENST00000534625 NPHS2Q9NP85 383 aa6.91□□□□□ -1.3
ATM-224ENST00000534625 NARFQ9UHQ1 456 aa6.91□□□□□ -1.3
ATM-224ENST00000534625 BRCA1P38398 1863 aaKnown RBP6.91□□□□□ -1.3
ATM-224ENST00000534625 KCNQ3O43525 872 aa6.9□□□□□ -1.3
ATM-224ENST00000534625 GAS2O43903 313 aaKnown RBP6.9□□□□□ -1.3
ATM-224ENST00000534625 CPNE3O75131 537 aaKnown RBP6.9□□□□□ -1.3
ATM-224ENST00000534625 STARD3NLO95772 234 aa6.9□□□□□ -1.3
ATM-224ENST00000534625 ITPKAP23677 461 aa6.9□□□□□ -1.3
ATM-224ENST00000534625 PPP2R1AP30153 589 aa6.9□□□□□ -1.3
ATM-224ENST00000534625 CHRNA5P30532 468 aa6.9□□□□□ -1.3
ATM-224ENST00000534625 PRKAR2BP31323 418 aa6.9□□□□□ -1.3
ATM-224ENST00000534625 EIF5P55010 431 aaKnown RBP6.9□□□□□ -1.3
ATM-224ENST00000534625 ZNF790Q6PG37 636 aa6.9□□□□□ -1.3
ATM-224ENST00000534625 TTC5Q8N0Z6 440 aa6.9□□□□□ -1.3
ATM-224ENST00000534625 SHISA5Q8N114 240 aa6.9□□□□□ -1.3
ATM-224ENST00000534625 C2CD4AQ8NCU7 369 aaPredicted RBP6.9□□□□□ -1.3
ATM-224ENST00000534625 TRIM56Q9BRZ2 755 aaKnown RBP6.9□□□□□ -1.3
ATM-224ENST00000534625 NIF3L1Q9GZT8 377 aa6.9□□□□□ -1.3
ATM-224ENST00000534625 ZNF576Q9H609 170 aa6.9□□□□□ -1.3
ATM-224ENST00000534625 PIM2Q9P1W9 311 aa6.9□□□□□ -1.3
ATM-224ENST00000534625 COL15A1P39059 1388 aa6.9□□□□□ -1.31
ATM-224ENST00000534625 CEMIPQ8WUJ3 1361 aa6.9□□□□□ -1.31
ATM-224ENST00000534625 UBR2Q8IWV8 1755 aa6.9□□□□□ -1.31
ATM-224ENST00000534625 EIF1AYO14602 144 aaKnown RBP6.89□□□□□ -1.31
ATM-224ENST00000534625 ECEL1O95672 775 aa6.89□□□□□ -1.31
ATM-224ENST00000534625 NEFLP07196 543 aa6.89□□□□□ -1.31
ATM-224ENST00000534625 MAOBP27338 520 aa6.89□□□□□ -1.31
ATM-224ENST00000534625 CANXP27824 592 aaKnown RBP6.89□□□□□ -1.31
ATM-224ENST00000534625 SOX4Q06945 474 aaPredicted RBP6.89□□□□□ -1.31
ATM-224ENST00000534625 TEFQ10587 303 aa6.89□□□□□ -1.31
ATM-224ENST00000534625 DALRD3Q5D0E6 543 aaKnown RBP6.89□□□□□ -1.31
ATM-224ENST00000534625 CDPF1Q6NVV7 123 aa6.89□□□□□ -1.31
ATM-224ENST00000534625 CCDC74AQ96AQ1 378 aa6.89□□□□□ -1.31
ATM-224ENST00000534625 CFAP53Q96M91 514 aa6.89□□□□□ -1.31
ATM-224ENST00000534625 KRTAP4-9Q9BYQ8 210 aa6.89□□□□□ -1.31
ATM-224ENST00000534625 HEG1Q9ULI3 1381 aa6.89□□□□□ -1.31
ATM-224ENST00000534625 AFDNP55196 1824 aaKnown RBP6.89□□□□□ -1.31
ATM-224ENST00000534625 ARFGEF1Q9Y6D6 1849 aa6.89□□□□□ -1.31
ATM-224ENST00000534625 SIPA1L3O60292 1781 aaPredicted RBP6.88□□□□□ -1.31
ATM-224ENST00000534625 B3GALT4O96024 378 aa6.88□□□□□ -1.31
ATM-224ENST00000534625 A1BGP04217 495 aa6.88□□□□□ -1.31
ATM-224ENST00000534625 SERPINB2P05120 415 aa6.88□□□□□ -1.31
ATM-224ENST00000534625 U2AF1L5P0DN76 240 aaPredicted RBP6.88□□□□□ -1.31
ATM-224ENST00000534625 U2AF1Q01081 240 aaKnown RBP eCLIP6.88□□□□□ -1.31
ATM-224ENST00000534625 C9orf131Q5VYM1 1079 aa6.88□□□□□ -1.31
ATM-224ENST00000534625 MFSD14AQ96MC6 490 aa6.88□□□□□ -1.31
ATM-224ENST00000534625 TEX13AQ9BXU3 409 aaPredicted RBP6.88□□□□□ -1.31
ATM-224ENST00000534625 DNAJC25Q9H1X3 360 aa6.88□□□□□ -1.31
ATM-224ENST00000534625 EHD4Q9H223 541 aa6.88□□□□□ -1.31
ATM-224ENST00000534625 ABCB6Q9NP58 842 aa6.88□□□□□ -1.31
ATM-224ENST00000534625 NUDCQ9Y266 331 aa6.88□□□□□ -1.31
ATM-224ENST00000534625 NRXN2Q9P2S2 1712 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 A0A087WZG4 1122 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 PRAMEF22A3QJZ6 481 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 SOWAHDA6NJG2 315 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 WDR64B1ANS9 1081 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 F13BP05160 661 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 ADH5P11766 374 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 HOXA10P31260 410 aaPredicted RBP6.87□□□□□ -1.31
ATM-224ENST00000534625 IL6STP40189 918 aaPredicted RBP6.87□□□□□ -1.31
ATM-224ENST00000534625 JAG1P78504 1218 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 POU4F3Q15319 338 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 TBC1D9BQ66K14 1250 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 PRPF40BQ6NWY9 871 aaKnown RBP6.87□□□□□ -1.31
ATM-224ENST00000534625 MCM10Q7L590 875 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 GLIS3Q8NEA6 775 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 FBLIM1Q8WUP2 373 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 EZH1Q92800 747 aaPredicted RBP6.87□□□□□ -1.31
ATM-224ENST00000534625 ALKBH8Q96BT7 664 aaKnown RBP6.87□□□□□ -1.31
ATM-224ENST00000534625 RBCK1Q9BYM8 510 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 USP16Q9Y5T5 823 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 SBF1O95248 1867 aa6.87□□□□□ -1.31
ATM-224ENST00000534625 CARMIL3Q8ND23 1372 aa6.86□□□□□ -1.31
ATM-224ENST00000534625 HTATSF1O43719 755 aaKnown RBP6.86□□□□□ -1.31
ATM-224ENST00000534625 EIF4EBP3O60516 100 aaPredicted RBP6.86□□□□□ -1.31
ATM-224ENST00000534625 CAMTA2O94983 1202 aa6.86□□□□□ -1.31
ATM-224ENST00000534625 CYP11A1P05108 521 aa6.86□□□□□ -1.31
ATM-224ENST00000534625 HSPA6P17066 643 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms