RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 JARID2Q92833 1246 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-223ENST00000534442 NKD1Q969G9 470 aa6.51□□□□□ -1.37
ECHDC1-223ENST00000534442 GAL3ST3Q96A11 431 aa6.51□□□□□ -1.37
ECHDC1-223ENST00000534442 ACDQ96AP0 544 aa6.51□□□□□ -1.37
ECHDC1-223ENST00000534442 HHIPL1Q96JK4 782 aa6.51□□□□□ -1.37
ECHDC1-223ENST00000534442 MIR1-1HGQ9H1L0 117 aa6.51□□□□□ -1.37
ECHDC1-223ENST00000534442 ZNF408Q9H9D4 720 aa6.51□□□□□ -1.37
ECHDC1-223ENST00000534442 SAMM50Q9Y512 469 aa6.51□□□□□ -1.37
ECHDC1-223ENST00000534442 ACEP12821 1306 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 CEP162Q5TB80 1403 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 PPIP5K1Q6PFW1 1433 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 UBR3Q6ZT12 1888 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 H3BRJ5 948 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 CILPO75339 1184 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 ALBP02768 609 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 SSBP05455 408 aaKnown RBP eCLIP6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 ALAS2P22557 587 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 CDC25BP30305 580 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 ETFBP38117 255 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 LRRC14Q15048 493 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 SEZ6Q53EL9 994 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 KANK3Q6NY19 840 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 LLGL2Q6P1M3 1020 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 CACTIN-AS1Q8N1I8 211 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 IL22RA1Q8N6P7 574 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 MAFAQ8NHW3 353 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 DPF3Q92784 378 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 LRFN3Q9BTN0 628 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 PIF1Q9H611 641 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 HACL1Q9UJ83 578 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 GDF2Q9UK05 429 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 C4AP0C0L4 1744 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 C4BP0C0L5 1744 aa6.5□□□□□ -1.37
ECHDC1-223ENST00000534442 E9PCH4 1651 aa6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 NSD2O96028 1365 aa6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 DICER1Q9UPY3 1922 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 SMARCA5O60264 1052 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 AFF1P51825 1210 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 SRSF11Q05519 484 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 NFX1Q12986 1120 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 ACAP1Q15027 740 aa6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 SOGA3Q5TF21 947 aa6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 PNMA8AQ86V59 439 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 CARD10Q9BWT7 1032 aa6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 EMILIN2Q9BXX0 1053 aa6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 SOX17Q9H6I2 414 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 CBX8Q9HC52 389 aa6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 JPH1Q9HDC5 661 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 CACNA2D2Q9NY47 1150 aa6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 STRIP2Q9ULQ0 834 aa6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 MRVI1Q9Y6F6 885 aa6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 ANKARQ7Z5J8 1434 aa6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 NSD3Q9BZ95 1437 aa6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 KIF7Q2M1P5 1343 aa6.49□□□□□ -1.37
ECHDC1-223ENST00000534442 AKAP11Q9UKA4 1901 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 TAF1LQ8IZX4 1826 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 USP34Q70CQ2 3546 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 LINC01387J3KSC0 135 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 GSTP1P09211 210 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 SELPP16109 830 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 CABP4P57796 275 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 MPP2Q14168 576 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 TXNDC11Q6PKC3 985 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 C8orf86Q6ZUL3 223 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 SHDQ96IW2 340 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 NRSN2Q9GZP1 204 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 PPT2Q9UMR5 302 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 PPME1Q9Y570 386 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 NCOR1O75376 2440 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 IRS2Q9Y4H2 1338 aa6.48□□□□□ -1.37
ECHDC1-223ENST00000534442 SPTBN4Q9H254 2564 aa6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 FAM177BA6PVY3 158 aa6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 TERTO14746 1132 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 TM4SF5O14894 197 aa6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 CELF2O95319 508 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 ECEL1O95672 775 aa6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 KIF23Q02241 960 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 GSTM4Q03013 218 aa6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 AP3B2Q13367 1082 aa6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 SERINC3Q13530 473 aa6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 CCDC81Q6ZN84 652 aa6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 REC114Q7Z4M0 266 aa6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 NOP9Q86U38 636 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 CKAP2LQ8IYA6 745 aa6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 NGDNQ8NEJ9 315 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 SLC7A3Q8WY07 619 aa6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 SRRTQ9BXP5 876 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 OSBPL2Q9H1P3 480 aa6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 ZSWIM4Q9H7M6 989 aa6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 BRMS1Q9HCU9 246 aa6.47□□□□□ -1.37
ECHDC1-223ENST00000534442 USP47Q96K76 1375 aa6.46□□□□□ -1.37
ECHDC1-223ENST00000534442 M0R082 166 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 KLF4O43474 513 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 CDK8P49336 464 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 CLCQ05315 142 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 C19orf57Q0VDD7 668 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 CWF19L2Q2TBE0 894 aaKnown RBP6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 SCARA3Q6AZY7 606 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 ANKS3Q6ZW76 656 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms