RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 MTERF4Q7Z6M4 381 aaKnown RBP3.92□□□□□ -1.78
CSDE1-216ENST00000534389 RBBP8NLQ8NC74 664 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-216ENST00000534389 SHKBP1Q8TBC3 707 aa3.92□□□□□ -1.78
CSDE1-216ENST00000534389 ZBTB9Q96C00 473 aa3.92□□□□□ -1.78
CSDE1-216ENST00000534389 ARMC5Q96C12 935 aa3.92□□□□□ -1.78
CSDE1-216ENST00000534389 COX4I2Q96KJ9 171 aa3.92□□□□□ -1.78
CSDE1-216ENST00000534389 SRPK1Q96SB4 655 aaKnown RBP3.92□□□□□ -1.78
CSDE1-216ENST00000534389 SLC9A7Q96T83 725 aa3.92□□□□□ -1.78
CSDE1-216ENST00000534389 DSCC1Q9BVC3 393 aa3.92□□□□□ -1.78
CSDE1-216ENST00000534389 GBP3Q9H0R5 595 aa3.92□□□□□ -1.78
CSDE1-216ENST00000534389 ZSWIM4Q9H7M6 989 aa3.92□□□□□ -1.78
CSDE1-216ENST00000534389 C1GALT1Q9NS00 363 aa3.92□□□□□ -1.78
CSDE1-216ENST00000534389 SLC52A1Q9NWF4 448 aa3.92□□□□□ -1.78
CSDE1-216ENST00000534389 ISY1Q9ULR0 285 aaKnown RBP3.92□□□□□ -1.78
CSDE1-216ENST00000534389 BRD4O60885 1362 aaPredicted RBP3.91□□□□□ -1.78
CSDE1-216ENST00000534389 A0A1W2PQH9 124 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 K7ELQ4 463 aaPredicted RBP3.91□□□□□ -1.78
CSDE1-216ENST00000534389 DNAJA2O60884 412 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 ADMP35318 185 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 MMP14P50281 582 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 BMS1Q14692 1282 aaKnown RBP3.91□□□□□ -1.78
CSDE1-216ENST00000534389 NCAPHQ15003 741 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 NFE2L2Q16236 605 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 INTS3Q68E01 1043 aaKnown RBP3.91□□□□□ -1.78
CSDE1-216ENST00000534389 KIAA1211LQ6NV74 962 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 MFSD4AQ8N468 514 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 TAB3Q8N5C8 712 aaPredicted RBP3.91□□□□□ -1.78
CSDE1-216ENST00000534389 NGEFQ8N5V2 710 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 C19orf47Q8N9M1 422 aaKnown RBP3.91□□□□□ -1.78
CSDE1-216ENST00000534389 RNF141Q8WVD5 230 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 CHMP4CQ96CF2 233 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 TRIM44Q96DX7 344 aaPredicted RBP3.91□□□□□ -1.78
CSDE1-216ENST00000534389 MRFAP1L1Q96HT8 127 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 PDLIM2Q96JY6 352 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 KREMEN1Q96MU8 473 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 ASPNQ9BXN1 380 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 CGNQ9P2M7 1197 aaKnown RBP3.91□□□□□ -1.78
CSDE1-216ENST00000534389 SUCOQ9UBS9 1254 aaKnown RBP3.91□□□□□ -1.78
CSDE1-216ENST00000534389 NOL7Q9UMY1 257 aaKnown RBP3.91□□□□□ -1.78
CSDE1-216ENST00000534389 PCDHB10Q9UN67 800 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 MAPK8IP1Q9UQF2 711 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 PCDHB12Q9Y5F1 795 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 NCOA3Q9Y6Q9 1424 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 TEX14Q8IWB6 1497 aa3.91□□□□□ -1.78
CSDE1-216ENST00000534389 MEIS1O00470 390 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 NOP56O00567 594 aaKnown RBP3.9□□□□□ -1.79
CSDE1-216ENST00000534389 TNFRSF10CO14798 259 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 PPM1BO75688 479 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 SLITRK5O94991 958 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 F13BP05160 661 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 KIR3DL1P43629 444 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 KCNJ4P48050 445 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 PMS1P54277 932 aaKnown RBP3.9□□□□□ -1.79
CSDE1-216ENST00000534389 ZYXQ15942 572 aaKnown RBP3.9□□□□□ -1.79
CSDE1-216ENST00000534389 NBPF9Q3BBW0 867 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 SV2CQ496J9 727 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 HS1BP3Q53T59 392 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 NBPF6Q5VWK0 638 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 CWF19L1Q69YN2 538 aaKnown RBP3.9□□□□□ -1.79
CSDE1-216ENST00000534389 C6orf15Q6UXA7 325 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-216ENST00000534389 EEPD1Q7L9B9 569 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 SLC51AQ86UW1 340 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 FAM169BQ8N8A8 192 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 FAM181AQ8N9Y4 354 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 MYRIPQ8NFW9 859 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 RIN3Q8TB24 985 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 SMARCC1Q92922 1105 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-216ENST00000534389 NBPF4Q96M43 638 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 TNKS2Q9H2K2 1166 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 TRIT1Q9H3H1 467 aaKnown RBP3.9□□□□□ -1.79
CSDE1-216ENST00000534389 SIRPGQ9P1W8 387 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 PIM2Q9P1W9 311 aa3.9□□□□□ -1.79
CSDE1-216ENST00000534389 VIRMAQ69YN4 1812 aaKnown RBP3.9□□□□□ -1.79
CSDE1-216ENST00000534389 POLR1AO95602 1720 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-216ENST00000534389 BLMP54132 1417 aaPredicted RBP3.89□□□□□ -1.79
CSDE1-216ENST00000534389 FGD6Q6ZV73 1430 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 KDM6BO15054 1643 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 SMARCA4P51532 1647 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 TULP2O00295 520 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 ADAM23O75077 832 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 UBOX5O94941 541 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 HSP90AB1P08238 724 aaKnown RBP3.89□□□□□ -1.79
CSDE1-216ENST00000534389 ACRP10323 421 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 ITGA4P13612 1032 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 LTKP29376 864 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 CASP7P55210 303 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 SLC20A2Q08357 652 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 RAB33AQ14088 237 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 PPP2R5DQ14738 602 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 CPSF6Q16630 551 aaKnown RBP eCLIP3.89□□□□□ -1.793e-7■□□□□ 8.6
CSDE1-216ENST00000534389 DDR2Q16832 855 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 MTERF2Q49AM1 385 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 DNTTIP2Q5QJE6 756 aaKnown RBP3.89□□□□□ -1.79
CSDE1-216ENST00000534389 FAM178BQ8IXR5 827 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 TNPO1Q92973 898 aaKnown RBP3.89□□□□□ -1.79
CSDE1-216ENST00000534389 APBA2Q99767 749 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 OSBPL2Q9H1P3 480 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 GPATCH2Q9NW75 528 aa3.89□□□□□ -1.79
CSDE1-216ENST00000534389 ANGEL1Q9UNK9 670 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms