RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 PRR13Q9NZ81 148 aa5.63□□□□□ -1.51
HIPK3-206ENST00000534262 KLHL42Q9P2K6 505 aa5.63□□□□□ -1.51
HIPK3-206ENST00000534262 SUGT1Q9Y2Z0 365 aa5.63□□□□□ -1.51
HIPK3-206ENST00000534262 COL4A3BPQ9Y5P4 624 aa5.63□□□□□ -1.51
HIPK3-206ENST00000534262 FAM221BA6H8Z2 402 aa5.62□□□□□ -1.51
HIPK3-206ENST00000534262 SMAD7O15105 426 aaKnown RBP5.62□□□□□ -1.51
HIPK3-206ENST00000534262 RNASE1P07998 156 aaKnown RBP5.62□□□□□ -1.51
HIPK3-206ENST00000534262 BBS9Q3SYG4 887 aa5.62□□□□□ -1.51
HIPK3-206ENST00000534262 TDRD10Q5VZ19 366 aaKnown RBP5.62□□□□□ -1.51
HIPK3-206ENST00000534262 CCDC144CPQ8IYA2 1237 aa5.62□□□□□ -1.51
HIPK3-206ENST00000534262 USHBP1Q8N6Y0 703 aa5.62□□□□□ -1.51
HIPK3-206ENST00000534262 ZCRB1Q8TBF4 217 aaKnown RBP5.62□□□□□ -1.51
HIPK3-206ENST00000534262 PI4K2BQ8TCG2 481 aa5.62□□□□□ -1.51
HIPK3-206ENST00000534262 KLHL6Q8WZ60 621 aa5.62□□□□□ -1.51
HIPK3-206ENST00000534262 ASCC2Q9H1I8 757 aaPredicted RBP5.62□□□□□ -1.51
HIPK3-206ENST00000534262 PRDM7Q9NQW5 492 aa5.62□□□□□ -1.51
HIPK3-206ENST00000534262 PRKAG3Q9UGI9 489 aa5.62□□□□□ -1.51
HIPK3-206ENST00000534262 ZNF281Q9Y2X9 895 aa5.62□□□□□ -1.51
HIPK3-206ENST00000534262 PCDHB12Q9Y5F1 795 aa5.62□□□□□ -1.51
HIPK3-206ENST00000534262 CBFA2T2O43439 604 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 SIGLEC6O43699 453 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 PARNO95453 639 aaKnown RBP5.61□□□□□ -1.51
HIPK3-206ENST00000534262 PRAMEF1O95521 474 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 TP53P04637 393 aaPredicted RBP5.61□□□□□ -1.51
HIPK3-206ENST00000534262 CD247P20963 164 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 CLEC16AQ2KHT3 1053 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 GNPTABQ3T906 1256 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 RNF187Q5TA31 235 aaPredicted RBP5.61□□□□□ -1.51
HIPK3-206ENST00000534262 DCAF15Q66K64 600 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 ANKS3Q6ZW76 656 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 CREG2Q8IUH2 290 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 ZNF655Q8N720 491 aaPredicted RBP5.61□□□□□ -1.51
HIPK3-206ENST00000534262 JMYQ8N9B5 988 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 TCTN2Q96GX1 697 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 KANSL2Q9H9L4 492 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 SLC52A1Q9NWF4 448 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 DUSP13Q9UII6 198 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 FBXL21Q9UKT6 434 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 PCDHB10Q9UN67 800 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 PRKAB1Q9Y478 270 aa5.61□□□□□ -1.51
HIPK3-206ENST00000534262 AMPD3Q01432 767 aa5.6□□□□□ -1.51
HIPK3-206ENST00000534262 SLC7A5Q01650 507 aa5.6□□□□□ -1.51
HIPK3-206ENST00000534262 TNNI3KQ59H18 835 aa5.6□□□□□ -1.51
HIPK3-206ENST00000534262 CCDC181Q5TID7 509 aa5.6□□□□□ -1.51
HIPK3-206ENST00000534262 NOL8Q76FK4 1167 aaKnown RBP5.6□□□□□ -1.51
HIPK3-206ENST00000534262 LINC00116Q8NCU8 138 aa5.6□□□□□ -1.51
HIPK3-206ENST00000534262 DEPDC7Q96QD5 511 aa5.6□□□□□ -1.51
HIPK3-206ENST00000534262 IRF2BPLQ9H1B7 796 aa5.6□□□□□ -1.51
HIPK3-206ENST00000534262 GP6Q9HCN6 339 aa5.6□□□□□ -1.51
HIPK3-206ENST00000534262 CHST7Q9NS84 486 aa5.6□□□□□ -1.51
HIPK3-206ENST00000534262 GFOD1Q9NXC2 390 aa5.6□□□□□ -1.51
HIPK3-206ENST00000534262 MINPP1Q9UNW1 487 aa5.6□□□□□ -1.51
HIPK3-206ENST00000534262 ZNF451Q9Y4E5 1061 aa5.6□□□□□ -1.51
HIPK3-206ENST00000534262 PCDHA11Q9Y5I1 949 aa5.6□□□□□ -1.51
HIPK3-206ENST00000534262 A0A087WZG4 1122 aa5.59□□□□□ -1.51
HIPK3-206ENST00000534262 VIL1P09327 827 aaKnown RBP5.59□□□□□ -1.51
HIPK3-206ENST00000534262 CTSKP43235 329 aa5.59□□□□□ -1.51
HIPK3-206ENST00000534262 ZNF445P59923 1031 aa5.59□□□□□ -1.51
HIPK3-206ENST00000534262 TEKQ02763 1124 aa5.59□□□□□ -1.51
HIPK3-206ENST00000534262 EGR3Q06889 387 aa5.59□□□□□ -1.51
HIPK3-206ENST00000534262 PLEKHG6Q3KR16 790 aa5.59□□□□□ -1.51
HIPK3-206ENST00000534262 VHLLQ6RSH7 139 aa5.59□□□□□ -1.51
HIPK3-206ENST00000534262 LILRB2Q8N423 598 aa5.59□□□□□ -1.51
HIPK3-206ENST00000534262 LRRN4CLQ8ND94 238 aa5.59□□□□□ -1.51
HIPK3-206ENST00000534262 CCDC113Q9H0I3 377 aa5.59□□□□□ -1.51
HIPK3-206ENST00000534262 SPC25Q9HBM1 224 aa5.59□□□□□ -1.51
HIPK3-206ENST00000534262 C19orf73Q9NVV2 129 aa5.59□□□□□ -1.51
HIPK3-206ENST00000534262 SUSD2Q9UGT4 822 aa5.59□□□□□ -1.51
HIPK3-206ENST00000534262 DNAJC25-GNG10A0A024R161 153 aa5.58□□□□□ -1.52
HIPK3-206ENST00000534262 DNAJC6O75061 913 aa5.58□□□□□ -1.52
HIPK3-206ENST00000534262 IBSPP21815 317 aaPredicted RBP5.58□□□□□ -1.52
HIPK3-206ENST00000534262 RALGPS1Q5JS13 557 aa5.58□□□□□ -1.52
HIPK3-206ENST00000534262 KIAA1211LQ6NV74 962 aa5.58□□□□□ -1.52
HIPK3-206ENST00000534262 FILIP1Q7Z7B0 1213 aa5.58□□□□□ -1.52
HIPK3-206ENST00000534262 CERS3Q8IU89 383 aa5.58□□□□□ -1.52
HIPK3-206ENST00000534262 HNRNPLLQ8WVV9 542 aaKnown RBP5.58□□□□□ -1.52
HIPK3-206ENST00000534262 ALPK1Q96QP1 1244 aa5.58□□□□□ -1.52
HIPK3-206ENST00000534262 SRPK1Q96SB4 655 aaKnown RBP5.58□□□□□ -1.52
HIPK3-206ENST00000534262 HAUS7Q99871 368 aa5.58□□□□□ -1.52
HIPK3-206ENST00000534262 KLHL25Q9H0H3 589 aa5.58□□□□□ -1.52
HIPK3-206ENST00000534262 ADAMTS10Q9H324 1103 aa5.58□□□□□ -1.52
HIPK3-206ENST00000534262 TYW1Q9NV66 732 aaKnown RBP5.58□□□□□ -1.52
HIPK3-206ENST00000534262 FAM86C1Q9NVL1 165 aa5.58□□□□□ -1.52
HIPK3-206ENST00000534262 ACTR10Q9NZ32 417 aa5.58□□□□□ -1.52
HIPK3-206ENST00000534262 EPHX1P07099 455 aa5.57□□□□□ -1.52
HIPK3-206ENST00000534262 LTKP29376 864 aa5.57□□□□□ -1.52
HIPK3-206ENST00000534262 IRAK1P51617 712 aa5.57□□□□□ -1.52
HIPK3-206ENST00000534262 ANAPC15P60006 121 aa5.57□□□□□ -1.52
HIPK3-206ENST00000534262 NOL9Q5SY16 702 aaKnown RBP5.57□□□□□ -1.52
HIPK3-206ENST00000534262 RNF111Q6ZNA4 994 aa5.57□□□□□ -1.52
HIPK3-206ENST00000534262 ZNF513Q8N8E2 541 aaPredicted RBP5.57□□□□□ -1.52
HIPK3-206ENST00000534262 SH3TC2Q8TF17 1288 aa5.57□□□□□ -1.52
HIPK3-206ENST00000534262 RC3H2Q9HBD1 1191 aaKnown RBP5.57□□□□□ -1.52
HIPK3-206ENST00000534262 TMEM260Q9NX78 707 aa5.57□□□□□ -1.52
HIPK3-206ENST00000534262 DDX56Q9NY93 547 aaKnown RBP5.57□□□□□ -1.52
HIPK3-206ENST00000534262 EBF1Q9UH73 591 aa5.57□□□□□ -1.52
HIPK3-206ENST00000534262 CTNND2Q9UQB3 1225 aa5.57□□□□□ -1.52
HIPK3-206ENST00000534262 FHOD1Q9Y613 1164 aa5.57□□□□□ -1.52
HIPK3-206ENST00000534262 TMEM82A0PJX8 343 aa5.56□□□□□ -1.52
HIPK3-206ENST00000534262 CLSTN1O94985 981 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms