RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 NEK9Q8TD19 979 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 MMP19Q99542 508 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 TRPV6Q9H1D0 765 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 CEP126Q9P2H0 1117 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 PALD1Q9ULE6 856 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 KMT2BQ9UMN6 2715 aaPredicted RBP13.07□□□□□ -0.32
CSDE1-215ENST00000533818 MED19A0JLT2 244 aaPredicted RBP13.06□□□□□ -0.32
CSDE1-215ENST00000533818 PROB1E7EW31 1015 aa13.06□□□□□ -0.32
CSDE1-215ENST00000533818 ZBTB22O15209 634 aa13.06□□□□□ -0.32
CSDE1-215ENST00000533818 RALBP1Q15311 655 aa13.06□□□□□ -0.32
CSDE1-215ENST00000533818 ATG9AQ7Z3C6 839 aa13.06□□□□□ -0.32
CSDE1-215ENST00000533818 MAPKAPK5Q8IW41 473 aa13.06□□□□□ -0.32
CSDE1-215ENST00000533818 SLC43A3Q8NBI5 491 aa13.06□□□□□ -0.32
CSDE1-215ENST00000533818 TANGO6Q9C0B7 1094 aa13.06□□□□□ -0.32
CSDE1-215ENST00000533818 SUGCTQ9HAC7 445 aa13.06□□□□□ -0.32
CSDE1-215ENST00000533818 ZHX1Q9UKY1 873 aaPredicted RBP13.06□□□□□ -0.32
CSDE1-215ENST00000533818 PDS5AQ29RF7 1337 aaKnown RBP13.06□□□□□ -0.32
CSDE1-215ENST00000533818 ADORA1P30542 326 aa13.05□□□□□ -0.32
CSDE1-215ENST00000533818 GJA9P57773 515 aa13.05□□□□□ -0.32
CSDE1-215ENST00000533818 KCTD2Q14681 263 aa13.05□□□□□ -0.32
CSDE1-215ENST00000533818 ATF7IPQ6VMQ6 1270 aa13.05□□□□□ -0.32
CSDE1-215ENST00000533818 TRIM67Q6ZTA4 783 aa13.05□□□□□ -0.32
CSDE1-215ENST00000533818 FBXL6Q8N531 539 aa13.05□□□□□ -0.32
CSDE1-215ENST00000533818 TGFBRAP1Q8WUH2 860 aa13.05□□□□□ -0.32
CSDE1-215ENST00000533818 NSUN4Q96CB9 384 aaKnown RBP13.05□□□□□ -0.32
CSDE1-215ENST00000533818 AGBL1Q96MI9 1066 aa13.05□□□□□ -0.32
CSDE1-215ENST00000533818 NOL10Q9BSC4 688 aaKnown RBP13.05□□□□□ -0.32
CSDE1-215ENST00000533818 ALG13Q9NP73 1137 aaKnown RBP13.05□□□□□ -0.32
CSDE1-215ENST00000533818 MTUS1Q9ULD2 1270 aa13.05□□□□□ -0.32
CSDE1-215ENST00000533818 LCHNA4D1U4 455 aa13.04□□□□□ -0.32
CSDE1-215ENST00000533818 H0Y858 1186 aa13.04□□□□□ -0.32
CSDE1-215ENST00000533818 SLC25A27O95847 323 aa13.04□□□□□ -0.32
CSDE1-215ENST00000533818 SNAI1O95863 264 aaPredicted RBP13.04□□□□□ -0.32
CSDE1-215ENST00000533818 ITGA7Q13683 1181 aa13.04□□□□□ -0.32
CSDE1-215ENST00000533818 EP400NLQ6ZTU2 488 aa13.04□□□□□ -0.32
CSDE1-215ENST00000533818 RNF135Q8IUD6 432 aa13.04□□□□□ -0.32
CSDE1-215ENST00000533818 UPF3AQ9H1J1 476 aaKnown RBP13.04□□□□□ -0.32
CSDE1-215ENST00000533818 TLR9Q9NR96 1032 aa13.04□□□□□ -0.32
CSDE1-215ENST00000533818 TECTAO75443 2155 aa13.04□□□□□ -0.32
CSDE1-215ENST00000533818 PRR23AA6NEV1 266 aa13.03□□□□□ -0.32
CSDE1-215ENST00000533818 B4GALT4O60513 344 aa13.03□□□□□ -0.32
CSDE1-215ENST00000533818 HLA-DOAP06340 250 aa13.03□□□□□ -0.32
CSDE1-215ENST00000533818 CXCL17Q6UXB2 119 aa13.03□□□□□ -0.32
CSDE1-215ENST00000533818 MSL3Q8N5Y2 521 aaKnown RBP13.03□□□□□ -0.32
CSDE1-215ENST00000533818 CNTNAP3BQ96NU0 1288 aa13.03□□□□□ -0.32
CSDE1-215ENST00000533818 POP1Q99575 1024 aaKnown RBP13.03□□□□□ -0.32
CSDE1-215ENST00000533818 FSD1Q9BTV5 496 aa13.03□□□□□ -0.32
CSDE1-215ENST00000533818 CNTNAP3Q9BZ76 1288 aa13.03□□□□□ -0.32
CSDE1-215ENST00000533818 RAI14Q9P0K7 980 aa13.03□□□□□ -0.32
CSDE1-215ENST00000533818 SAP30BPQ9UHR5 308 aaKnown RBP13.03□□□□□ -0.32
CSDE1-215ENST00000533818 FAM186AA6NE01 2351 aa13.03□□□□□ -0.32
CSDE1-215ENST00000533818 PKD1L2Q7Z442 2459 aa13.03□□□□□ -0.32
CSDE1-215ENST00000533818 ADCY6O43306 1168 aa13.02□□□□□ -0.33
CSDE1-215ENST00000533818 VAMP4O75379 141 aa13.02□□□□□ -0.33
CSDE1-215ENST00000533818 DSG3P32926 999 aa13.02□□□□□ -0.33
CSDE1-215ENST00000533818 RFX5P48382 616 aaPredicted RBP13.02□□□□□ -0.33
CSDE1-215ENST00000533818 BEX3Q00994 111 aa13.02□□□□□ -0.33
CSDE1-215ENST00000533818 ABCB5Q2M3G0 1257 aa13.02□□□□□ -0.33
CSDE1-215ENST00000533818 TATDN1Q6P1N9 297 aa13.02□□□□□ -0.33
CSDE1-215ENST00000533818 TBC1D9Q6ZT07 1266 aa13.02□□□□□ -0.33
CSDE1-215ENST00000533818 ATG4CQ96DT6 458 aa13.02□□□□□ -0.33
CSDE1-215ENST00000533818 ZBED2Q9BTP6 218 aa13.02□□□□□ -0.33
CSDE1-215ENST00000533818 SIL1Q9H173 461 aa13.02□□□□□ -0.33
CSDE1-215ENST00000533818 FLT1P17948 1338 aa13.02□□□□□ -0.33
CSDE1-215ENST00000533818 CTAGE5O15320 804 aa13.01□□□□□ -0.33
CSDE1-215ENST00000533818 CABYRO75952 493 aa13.01□□□□□ -0.33
CSDE1-215ENST00000533818 BAG3O95817 575 aa13.01□□□□□ -0.33
CSDE1-215ENST00000533818 PLCG2P16885 1265 aa13.01□□□□□ -0.33
CSDE1-215ENST00000533818 ERVK-21P61565 698 aa13.01□□□□□ -0.33
CSDE1-215ENST00000533818 ACVR2BQ13705 512 aa13.01□□□□□ -0.33
CSDE1-215ENST00000533818 CCDC144BQ3MJ40 725 aa13.01□□□□□ -0.33
CSDE1-215ENST00000533818 CERKLQ49MI3 558 aaPredicted RBP13.01□□□□□ -0.33
CSDE1-215ENST00000533818 TGS1Q96RS0 853 aaKnown RBP13.01□□□□□ -0.33
CSDE1-215ENST00000533818 SEZ6LQ9BYH1 1024 aa13.01□□□□□ -0.33
CSDE1-215ENST00000533818 FTOQ9C0B1 505 aaKnown RBP eCLIP13.01□□□□□ -0.33
CSDE1-215ENST00000533818 CABP5Q9NP86 173 aa13.01□□□□□ -0.33
CSDE1-215ENST00000533818 AATFQ9NY61 560 aaKnown RBP eCLIP13.01□□□□□ -0.33
CSDE1-215ENST00000533818 GRIN2DO15399 1336 aa13.01□□□□□ -0.33
CSDE1-215ENST00000533818 SIPA1L1O43166 1804 aa13□□□□□ -0.33
CSDE1-215ENST00000533818 FLOT1O75955 427 aa13□□□□□ -0.33
CSDE1-215ENST00000533818 AVPR2P30518 371 aa13□□□□□ -0.33
CSDE1-215ENST00000533818 VCPP55072 806 aaKnown RBP13□□□□□ -0.33
CSDE1-215ENST00000533818 TMEM132BQ14DG7 1078 aa13□□□□□ -0.33
CSDE1-215ENST00000533818 CCDC27Q2M243 656 aa13□□□□□ -0.33
CSDE1-215ENST00000533818 CCER1Q8TC90 406 aaPredicted RBP13□□□□□ -0.33
CSDE1-215ENST00000533818 PABPC5Q96DU9 382 aaKnown RBP13□□□□□ -0.33
CSDE1-215ENST00000533818 NCOR2Q9Y618 2525 aa13□□□□□ -0.33
CSDE1-215ENST00000533818 TPRP12270 2363 aaKnown RBP13□□□□□ -0.33
CSDE1-215ENST00000533818 COL4A4P53420 1690 aaPredicted RBP12.99□□□□□ -0.33
CSDE1-215ENST00000533818 COL4A6Q14031 1691 aa12.99□□□□□ -0.33
CSDE1-215ENST00000533818 CIAO1O76071 339 aa12.99□□□□□ -0.33
CSDE1-215ENST00000533818 CYP2C9P11712 490 aa12.99□□□□□ -0.33
CSDE1-215ENST00000533818 RFC2P35250 354 aa12.99□□□□□ -0.33
CSDE1-215ENST00000533818 KCNJ6P48051 423 aa12.99□□□□□ -0.33
CSDE1-215ENST00000533818 TIMM10P62072 90 aa12.99□□□□□ -0.33
CSDE1-215ENST00000533818 MAMDC4Q6UXC1 1216 aa12.99□□□□□ -0.33
CSDE1-215ENST00000533818 DGLUCYQ7Z3D6 616 aa12.99□□□□□ -0.33
CSDE1-215ENST00000533818 RIOX2Q8IUF8 465 aa12.99□□□□□ -0.33
CSDE1-215ENST00000533818 ADSSL1Q8N142 457 aa12.99□□□□□ -0.33
CSDE1-215ENST00000533818 CTNNA3Q9UI47 895 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms