RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 CNTNAP3Q9BZ76 1288 aa11.11□□□□□ -0.63
PACS1-213ENST00000533756 PDS5AQ29RF7 1337 aaKnown RBP11.1□□□□□ -0.63
PACS1-213ENST00000533756 F6X3S4 739 aa11.1□□□□□ -0.63
PACS1-213ENST00000533756 H3BQ06 376 aaPredicted RBP11.1□□□□□ -0.63
PACS1-213ENST00000533756 GJA9P57773 515 aa11.1□□□□□ -0.63
PACS1-213ENST00000533756 MECOMQ03112 1051 aa11.1□□□□□ -0.63
PACS1-213ENST00000533756 ZNF792Q3KQV3 632 aa11.1□□□□□ -0.63
PACS1-213ENST00000533756 GNASQ5JWF2 1037 aa11.1□□□□□ -0.63
PACS1-213ENST00000533756 RNF135Q8IUD6 432 aa11.1□□□□□ -0.63
PACS1-213ENST00000533756 MIER1Q8N108 512 aa11.1□□□□□ -0.63
PACS1-213ENST00000533756 CRACR2BQ8N4Y2 399 aaPredicted RBP11.1□□□□□ -0.63
PACS1-213ENST00000533756 MSL3Q8N5Y2 521 aaKnown RBP11.1□□□□□ -0.63
PACS1-213ENST00000533756 ZNF579Q8NAF0 562 aaKnown RBP11.1□□□□□ -0.63
PACS1-213ENST00000533756 AGBL1Q96MI9 1066 aa11.1□□□□□ -0.63
PACS1-213ENST00000533756 FSD1Q9BTV5 496 aa11.1□□□□□ -0.63
PACS1-213ENST00000533756 RPAP3Q9H6T3 665 aaPredicted RBP11.1□□□□□ -0.63
PACS1-213ENST00000533756 SUGCTQ9HAC7 445 aa11.1□□□□□ -0.63
PACS1-213ENST00000533756 TRIOO75962 3097 aa11.1□□□□□ -0.63
PACS1-213ENST00000533756 BRWD1Q9NSI6 2320 aa11.1□□□□□ -0.63
PACS1-213ENST00000533756 BAHCC1Q9P281 2608 aa11.1□□□□□ -0.63
PACS1-213ENST00000533756 EPG5Q9HCE0 2579 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 PLXNA3P51805 1871 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 SOWAHBA6NEL2 793 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 CABYRO75952 493 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 SLC25A27O95847 323 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 GH2P01242 217 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 NBL1P41271 181 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 GSTO1P78417 241 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 NBPF20Q3BBV1 942 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 ERICH6Q7L0X2 663 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 SPRED2Q7Z698 418 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 TEX11Q8IYF3 940 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 KLHDC4Q8TBB5 520 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 CDCA7LQ96GN5 454 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 SCLYQ96I15 445 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 UPF3AQ9H1J1 476 aaKnown RBP11.09□□□□□ -0.63
PACS1-213ENST00000533756 BICC1Q9H694 974 aaKnown RBP11.09□□□□□ -0.63
PACS1-213ENST00000533756 TECTAO75443 2155 aa11.09□□□□□ -0.63
PACS1-213ENST00000533756 COL4A4P53420 1690 aaPredicted RBP11.08□□□□□ -0.64
PACS1-213ENST00000533756 COL4A6Q14031 1691 aa11.08□□□□□ -0.64
PACS1-213ENST00000533756 H0Y858 1186 aa11.08□□□□□ -0.64
PACS1-213ENST00000533756 EYA2O00167 538 aa11.08□□□□□ -0.64
PACS1-213ENST00000533756 AVPR2P30518 371 aa11.08□□□□□ -0.64
PACS1-213ENST00000533756 PHKA1P46020 1223 aa11.08□□□□□ -0.64
PACS1-213ENST00000533756 CLCN6P51797 869 aa11.08□□□□□ -0.64
PACS1-213ENST00000533756 ERVK-21P61565 698 aa11.08□□□□□ -0.64
PACS1-213ENST00000533756 NKX3-2P78367 333 aa11.08□□□□□ -0.64
PACS1-213ENST00000533756 DGLUCYQ7Z3D6 616 aa11.08□□□□□ -0.64
PACS1-213ENST00000533756 ZNF384Q8TF68 577 aa11.08□□□□□ -0.64
PACS1-213ENST00000533756 PABPC5Q96DU9 382 aaKnown RBP11.08□□□□□ -0.64
PACS1-213ENST00000533756 MMP19Q99542 508 aa11.08□□□□□ -0.64
PACS1-213ENST00000533756 SIL1Q9H173 461 aa11.08□□□□□ -0.64
PACS1-213ENST00000533756 TLR9Q9NR96 1032 aa11.08□□□□□ -0.64
PACS1-213ENST00000533756 CTNNA3Q9UI47 895 aa11.08□□□□□ -0.64
PACS1-213ENST00000533756 DMDP11532 3685 aa11.07□□□□□ -0.64
PACS1-213ENST00000533756 A0A1B0GUL7 405 aa11.07□□□□□ -0.64
PACS1-213ENST00000533756 PGK2P07205 417 aa11.07□□□□□ -0.64
PACS1-213ENST00000533756 NBPF7P0C2Y1 421 aaPredicted RBP11.07□□□□□ -0.64
PACS1-213ENST00000533756 RFC2P35250 354 aa11.07□□□□□ -0.64
PACS1-213ENST00000533756 IRX5P78411 483 aaPredicted RBP11.07□□□□□ -0.64
PACS1-213ENST00000533756 ITGA7Q13683 1181 aa11.07□□□□□ -0.64
PACS1-213ENST00000533756 PLS1Q14651 629 aa11.07□□□□□ -0.64
PACS1-213ENST00000533756 KCTD2Q14681 263 aa11.07□□□□□ -0.64
PACS1-213ENST00000533756 COL19A1Q14993 1142 aa11.07□□□□□ -0.64
PACS1-213ENST00000533756 WDR43Q15061 677 aaKnown RBP eCLIP11.07□□□□□ -0.64
PACS1-213ENST00000533756 SMAD2Q15796 467 aaKnown RBP11.07□□□□□ -0.64
PACS1-213ENST00000533756 ATP2B3Q16720 1220 aa11.07□□□□□ -0.64
PACS1-213ENST00000533756 ATF7IPQ6VMQ6 1270 aa11.07□□□□□ -0.64
PACS1-213ENST00000533756 ANKRD44Q8N8A2 993 aa11.07□□□□□ -0.64
PACS1-213ENST00000533756 TGS1Q96RS0 853 aaKnown RBP11.07□□□□□ -0.64
PACS1-213ENST00000533756 SRCIN1Q9C0H9 1055 aa11.07□□□□□ -0.64
PACS1-213ENST00000533756 TRPV6Q9H1D0 765 aa11.07□□□□□ -0.64
PACS1-213ENST00000533756 KMT2EQ8IZD2 1858 aa11.06□□□□□ -0.64
PACS1-213ENST00000533756 B4GALT4O60513 344 aa11.06□□□□□ -0.64
PACS1-213ENST00000533756 SNAI1O95863 264 aaPredicted RBP11.06□□□□□ -0.64
PACS1-213ENST00000533756 ZXDAP98168 799 aa11.06□□□□□ -0.64
PACS1-213ENST00000533756 CCDC102BQ68D86 513 aa11.06□□□□□ -0.64
PACS1-213ENST00000533756 TATDN1Q6P1N9 297 aa11.06□□□□□ -0.64
PACS1-213ENST00000533756 MAMDC4Q6UXC1 1216 aa11.06□□□□□ -0.64
PACS1-213ENST00000533756 DEFB128Q7Z7B8 93 aa11.06□□□□□ -0.64
PACS1-213ENST00000533756 ADSSL1Q8N142 457 aa11.06□□□□□ -0.64
PACS1-213ENST00000533756 ACER1Q8TDN7 264 aa11.06□□□□□ -0.64
PACS1-213ENST00000533756 TSR2Q969E8 191 aaKnown RBP11.06□□□□□ -0.64
PACS1-213ENST00000533756 NKD2Q969F2 451 aaPredicted RBP11.06□□□□□ -0.64
PACS1-213ENST00000533756 NSUN4Q96CB9 384 aaKnown RBP11.06□□□□□ -0.64
PACS1-213ENST00000533756 ADAMTS8Q9UP79 889 aa11.06□□□□□ -0.64
PACS1-213ENST00000533756 SIPA1L1O43166 1804 aa11.06□□□□□ -0.64
PACS1-213ENST00000533756 TNKSO95271 1327 aa11.06□□□□□ -0.64
PACS1-213ENST00000533756 PKD1L2Q7Z442 2459 aa11.06□□□□□ -0.64
PACS1-213ENST00000533756 LCHNA4D1U4 455 aa11.05□□□□□ -0.64
PACS1-213ENST00000533756 CTAGE5O15320 804 aa11.05□□□□□ -0.64
PACS1-213ENST00000533756 BAIAP3O94812 1187 aa11.05□□□□□ -0.64
PACS1-213ENST00000533756 VCPP55072 806 aaKnown RBP11.05□□□□□ -0.64
PACS1-213ENST00000533756 RASGRF1Q13972 1273 aa11.05□□□□□ -0.64
PACS1-213ENST00000533756 RAB3GAP1Q15042 981 aa11.05□□□□□ -0.64
PACS1-213ENST00000533756 ATG9AQ7Z3C6 839 aa11.05□□□□□ -0.64
PACS1-213ENST00000533756 MRPL38Q96DV4 380 aaKnown RBP11.05□□□□□ -0.64
PACS1-213ENST00000533756 FBXO3Q9UK99 471 aa11.05□□□□□ -0.64
PACS1-213ENST00000533756 ZHX1Q9UKY1 873 aaPredicted RBP11.05□□□□□ -0.64
PACS1-213ENST00000533756 APAF1O14727 1248 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms