RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 CRHR2Q13324 411 aa25.42■■□□□ 1.66
VPS51-212ENST00000533656 TOB2Q14106 344 aaPredicted RBP25.42■■□□□ 1.66
VPS51-212ENST00000533656 BTNL9Q6UXG8 535 aa25.42■■□□□ 1.66
VPS51-212ENST00000533656 KCTD1Q719H9 257 aa25.42■■□□□ 1.66
VPS51-212ENST00000533656 PRPF38AQ8NAV1 312 aaKnown RBP25.42■■□□□ 1.66
VPS51-212ENST00000533656 SLF1Q9BQI6 1058 aa25.42■■□□□ 1.66
VPS51-212ENST00000533656 PPP1R9AQ9ULJ8 1098 aa25.42■■□□□ 1.66
VPS51-212ENST00000533656 TMEM232C9JQI7 657 aa25.41■■□□□ 1.66
VPS51-212ENST00000533656 DSG3P32926 999 aa25.41■■□□□ 1.66
VPS51-212ENST00000533656 GNAQP50148 359 aa25.41■■□□□ 1.66
VPS51-212ENST00000533656 HERVK_113P62684 666 aa25.41■■□□□ 1.66
VPS51-212ENST00000533656 PKN2Q16513 984 aaKnown RBP25.41■■□□□ 1.66
VPS51-212ENST00000533656 MB21D1Q8N884 522 aa25.41■■□□□ 1.66
VPS51-212ENST00000533656 NUP133Q8WUM0 1156 aa25.41■■□□□ 1.66
VPS51-212ENST00000533656 PALM3A6NDB9 673 aaPredicted RBP25.4■■□□□ 1.66
VPS51-212ENST00000533656 ST18O60284 1047 aa25.4■■□□□ 1.66
VPS51-212ENST00000533656 TLR2O60603 784 aa25.4■■□□□ 1.66
VPS51-212ENST00000533656 CAP1Q01518 475 aa25.4■■□□□ 1.66
VPS51-212ENST00000533656 APOBRQ0VD83 1088 aa25.4■■□□□ 1.66
VPS51-212ENST00000533656 IKQ13123 557 aaPredicted RBP25.4■■□□□ 1.66
VPS51-212ENST00000533656 MICU3Q86XE3 530 aa25.4■■□□□ 1.66
VPS51-212ENST00000533656 ZNF274Q96GC6 653 aaPredicted RBP25.4■■□□□ 1.66
VPS51-212ENST00000533656 P2RX7Q99572 595 aaKnown RBP25.4■■□□□ 1.66
VPS51-212ENST00000533656 LZTS2Q9BRK4 669 aa25.4■■□□□ 1.66
VPS51-212ENST00000533656 RBM28Q9NW13 759 aaKnown RBP25.4■■□□□ 1.66
VPS51-212ENST00000533656 BRPF3Q9ULD4 1205 aa25.4■■□□□ 1.66
VPS51-212ENST00000533656 NID2Q14112 1375 aa25.4■■□□□ 1.66
VPS51-212ENST00000533656 FRMPD2Q68DX3 1309 aaPredicted RBP25.39■■□□□ 1.66
VPS51-212ENST00000533656 SPDYE16A6NNV3 312 aaPredicted RBP25.39■■□□□ 1.66
VPS51-212ENST00000533656 GOLGA8BA8MQT2 603 aa25.39■■□□□ 1.66
VPS51-212ENST00000533656 CYP2C8P10632 490 aa25.39■■□□□ 1.66
VPS51-212ENST00000533656 AK2P54819 239 aa25.39■■□□□ 1.66
VPS51-212ENST00000533656 FBXO46Q6PJ61 603 aaPredicted RBP25.39■■□□□ 1.66
VPS51-212ENST00000533656 RASGRP2Q7LDG7 609 aa25.39■■□□□ 1.66
VPS51-212ENST00000533656 MAD2L2Q9UI95 211 aa25.39■■□□□ 1.66
VPS51-212ENST00000533656 ADGRA2Q96PE1 1338 aa25.38■■□□□ 1.65
VPS51-212ENST00000533656 CCDC196A0A1B0GTZ2 297 aa25.38■■□□□ 1.65
VPS51-212ENST00000533656 SYDE2Q5VT97 1194 aa25.38■■□□□ 1.65
VPS51-212ENST00000533656 FANCBQ8NB91 859 aa25.38■■□□□ 1.65
VPS51-212ENST00000533656 GPCPD1Q9NPB8 672 aa25.38■■□□□ 1.65
VPS51-212ENST00000533656 FBXO28Q9NVF7 368 aa25.38■■□□□ 1.65
VPS51-212ENST00000533656 ADAMTS5Q9UNA0 930 aa25.38■■□□□ 1.65
VPS51-212ENST00000533656 GOLGA8AA7E2F4 631 aa25.37■■□□□ 1.65
VPS51-212ENST00000533656 SMARCA1P28370 1054 aa25.37■■□□□ 1.65
VPS51-212ENST00000533656 METAP2P50579 478 aaKnown RBP eCLIP25.37■■□□□ 1.658e-8■■□□□ 13.1
VPS51-212ENST00000533656 RTN1Q16799 776 aa25.37■■□□□ 1.65
VPS51-212ENST00000533656 OTOP1Q7RTM1 612 aa25.37■■□□□ 1.65
VPS51-212ENST00000533656 CD99L2Q8TCZ2 262 aa25.37■■□□□ 1.65
VPS51-212ENST00000533656 MYL10Q9BUA6 226 aa25.37■■□□□ 1.65
VPS51-212ENST00000533656 NAP1L2Q9ULW6 460 aaPredicted RBP25.37■■□□□ 1.65
VPS51-212ENST00000533656 RABGAP1Q9Y3P9 1069 aa25.37■■□□□ 1.65
VPS51-212ENST00000533656 KLRF2D3W0D1 207 aa25.36■■□□□ 1.65
VPS51-212ENST00000533656 ZBED4O75132 1171 aa25.36■■□□□ 1.65
VPS51-212ENST00000533656 GOLGA8HP0CJ92 632 aa25.36■■□□□ 1.65
VPS51-212ENST00000533656 FAM110CQ1W6H9 321 aa25.36■■□□□ 1.65
VPS51-212ENST00000533656 KIFC2Q96AC6 838 aa25.36■■□□□ 1.65
VPS51-212ENST00000533656 ATG4CQ96DT6 458 aa25.36■■□□□ 1.65
VPS51-212ENST00000533656 PNMA2Q9UL42 364 aa25.36■■□□□ 1.65
VPS51-212ENST00000533656 TRIM17Q9Y577 477 aa25.36■■□□□ 1.65
VPS51-212ENST00000533656 VWA5AO00534 786 aa25.35■■□□□ 1.65
VPS51-212ENST00000533656 PDIA3P30101 505 aaKnown RBP25.35■■□□□ 1.65
VPS51-212ENST00000533656 TTBK2Q6IQ55 1244 aa25.35■■□□□ 1.65
VPS51-212ENST00000533656 C17orf99Q6UX52 265 aa25.35■■□□□ 1.65
VPS51-212ENST00000533656 CHMP4CQ96CF2 233 aa25.35■■□□□ 1.65
VPS51-212ENST00000533656 SLC38A10Q9HBR0 1119 aa25.35■■□□□ 1.65
VPS51-212ENST00000533656 MORF4L1Q9UBU8 362 aa25.35■■□□□ 1.65
VPS51-212ENST00000533656 PRR12Q9ULL5 1215 aa25.35■■□□□ 1.65
VPS51-212ENST00000533656 CTDP1Q9Y5B0 961 aaPredicted RBP25.35■■□□□ 1.65
VPS51-212ENST00000533656 BRCA2P51587 3418 aa25.35■■□□□ 1.65
VPS51-212ENST00000533656 MCM2P49736 904 aa25.34■■□□□ 1.65
VPS51-212ENST00000533656 OAZ1P54368 228 aa25.34■■□□□ 1.65
VPS51-212ENST00000533656 STAG2Q8N3U4 1231 aa25.34■■□□□ 1.65
VPS51-212ENST00000533656 SPZ1Q9BXG8 430 aa25.34■■□□□ 1.65
VPS51-212ENST00000533656 BCRP11274 1271 aa25.33■■□□□ 1.65
VPS51-212ENST00000533656 RXRAP19793 462 aa25.33■■□□□ 1.65
VPS51-212ENST00000533656 SLC16A2P36021 539 aa25.33■■□□□ 1.65
VPS51-212ENST00000533656 TMTC3Q6ZXV5 915 aa25.33■■□□□ 1.65
VPS51-212ENST00000533656 RANBP17Q9H2T7 1088 aaKnown RBP25.33■■□□□ 1.65
VPS51-212ENST00000533656 RBBP6Q7Z6E9 1792 aaKnown RBP25.33■■□□□ 1.65
VPS51-212ENST00000533656 A0A0G2JMZ2 1700 aa25.32■■□□□ 1.64
VPS51-212ENST00000533656 MKI67P46013 3256 aaKnown RBP25.32■■□□□ 1.64
VPS51-212ENST00000533656 ATP2A1O14983 1001 aa25.32■■□□□ 1.64
VPS51-212ENST00000533656 CCNA1P78396 465 aa25.32■■□□□ 1.64
VPS51-212ENST00000533656 SAMD1Q6SPF0 538 aaPredicted RBP25.32■■□□□ 1.64
VPS51-212ENST00000533656 CCDC144CPQ8IYA2 1237 aa25.32■■□□□ 1.64
VPS51-212ENST00000533656 REPS2Q8NFH8 660 aa25.32■■□□□ 1.64
VPS51-212ENST00000533656 GPRC5AQ8NFJ5 357 aa25.32■■□□□ 1.64
VPS51-212ENST00000533656 ZSCAN31Q96LW9 406 aaPredicted RBP25.32■■□□□ 1.64
VPS51-212ENST00000533656 UBA5Q9GZZ9 404 aa25.32■■□□□ 1.64
VPS51-212ENST00000533656 RIOX1Q9H6W3 641 aa25.32■■□□□ 1.64
VPS51-212ENST00000533656 RBPJLQ9UBG7 517 aa25.32■■□□□ 1.64
VPS51-212ENST00000533656 TPCN1Q9ULQ1 816 aa25.32■■□□□ 1.64
VPS51-212ENST00000533656 LIMCH1Q9UPQ0 1083 aa25.32■■□□□ 1.64
VPS51-212ENST00000533656 DHX16O60231 1041 aaKnown RBP25.31■■□□□ 1.64
VPS51-212ENST00000533656 COPB2P35606 906 aa25.31■■□□□ 1.64
VPS51-212ENST00000533656 ERVK-9P63128 1117 aa25.31■■□□□ 1.64
VPS51-212ENST00000533656 ERVK-24P63145 666 aa25.31■■□□□ 1.64
VPS51-212ENST00000533656 RAB11FIP4Q86YS3 637 aa25.31■■□□□ 1.64
VPS51-212ENST00000533656 ADGRF4Q8IZF3 695 aa25.31■■□□□ 1.64
VPS51-212ENST00000533656 ANKRD13CQ8N6S4 541 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms