RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 POU3F3P20264 500 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-213ENST00000533149 DSG3P32926 999 aa13.62□□□□□ -0.23
TRAPPC4-213ENST00000533149 KCTD2Q14681 263 aa13.62□□□□□ -0.23
TRAPPC4-213ENST00000533149 PCSK9Q8NBP7 692 aaKnown RBP13.62□□□□□ -0.23
TRAPPC4-213ENST00000533149 VTI1AQ96AJ9 217 aa13.62□□□□□ -0.23
TRAPPC4-213ENST00000533149 PPP1R12CQ9BZL4 782 aa13.62□□□□□ -0.23
TRAPPC4-213ENST00000533149 C11orf16Q9NQ32 467 aa13.62□□□□□ -0.23
TRAPPC4-213ENST00000533149 FAM184BQ9ULE4 1060 aa13.62□□□□□ -0.23
TRAPPC4-213ENST00000533149 EXOC6BQ9Y2D4 811 aa13.62□□□□□ -0.23
TRAPPC4-213ENST00000533149 SMCHD1A6NHR9 2005 aa13.61□□□□□ -0.23
TRAPPC4-213ENST00000533149 A0A0U1RQG5 324 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC4-213ENST00000533149 FLOT1O75955 427 aa13.61□□□□□ -0.23
TRAPPC4-213ENST00000533149 USP5P45974 858 aa13.61□□□□□ -0.23
TRAPPC4-213ENST00000533149 ZNF792Q3KQV3 632 aa13.61□□□□□ -0.23
TRAPPC4-213ENST00000533149 CCSAPQ6IQ19 270 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC4-213ENST00000533149 CHD1LQ86WJ1 897 aa13.61□□□□□ -0.23
TRAPPC4-213ENST00000533149 MSL3Q8N5Y2 521 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-213ENST00000533149 NOP58Q9Y2X3 529 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-213ENST00000533149 PCDHA11Q9Y5I1 949 aa13.61□□□□□ -0.23
TRAPPC4-213ENST00000533149 CDK5RAP2Q96SN8 1893 aa13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 A0A0G2JMZ2 1700 aa13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 PI4K2BG5E9Z4 385 aa13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 SMIM22K7EJ46 135 aa13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 ARVCFO00192 962 aa13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 DUSP11O75319 330 aaKnown RBP13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 PGK2P07205 417 aa13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 CST5P28325 142 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 MRE11P49959 708 aa13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 HSP90AB4PQ58FF6 505 aa13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 LENG1Q96BZ8 264 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 LNPKQ9C0E8 428 aa13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 SPC25Q9HBM1 224 aa13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 SNRKQ9NRH2 765 aa13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 ZBTB47Q9UFB7 747 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC4-213ENST00000533149 FAM86C2PA6NEL3 165 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 PRR33A8MZF0 331 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 SMARCA5O60264 1052 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 RAB11FIP3O75154 756 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 ASGR1P07306 291 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 PDE4AP27815 886 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 CYP2C18P33260 490 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 GUCY1A2P33402 732 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 SHMT1P34896 483 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 DYNLL1P63167 89 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 G3BP1Q13283 466 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 SEPT2Q15019 361 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 CCDC158Q5M9N0 1113 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 TTC39AQ5SRH9 613 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 OTOP2Q7RTS6 562 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 FAM126BQ8IXS8 530 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 HLA-CQ95604 372 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 ATG4CQ96DT6 458 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 MTCH2Q9Y6C9 303 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 SLC4A7Q9Y6M7 1214 aa13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC4-213ENST00000533149 PIEZO1Q92508 2521 aa13.58□□□□□ -0.24
TRAPPC4-213ENST00000533149 A0A1W2PRG0 241 aa13.58□□□□□ -0.24
TRAPPC4-213ENST00000533149 MPHOSPH10O00566 681 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-213ENST00000533149 CYP2E1P05181 493 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC4-213ENST00000533149 C6orf222P0C671 652 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC4-213ENST00000533149 CYP7A1P22680 504 aa13.58□□□□□ -0.24
TRAPPC4-213ENST00000533149 COPB2P35606 906 aa13.58□□□□□ -0.24
TRAPPC4-213ENST00000533149 RABGGTBP53611 331 aa13.58□□□□□ -0.24
TRAPPC4-213ENST00000533149 OS9Q13438 667 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC4-213ENST00000533149 TMEM132BQ14DG7 1078 aa13.58□□□□□ -0.24
TRAPPC4-213ENST00000533149 RIOX2Q8IUF8 465 aa13.58□□□□□ -0.24
TRAPPC4-213ENST00000533149 RPUSD2Q8IZ73 545 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-213ENST00000533149 CD4P01730 458 aa13.57□□□□□ -0.24
TRAPPC4-213ENST00000533149 LRRCC1Q9C099 1032 aa13.57□□□□□ -0.24
TRAPPC4-213ENST00000533149 BCL11AQ9H165 835 aa13.57□□□□□ -0.24
TRAPPC4-213ENST00000533149 HIPK3Q9H422 1215 aa13.57□□□□□ -0.24
TRAPPC4-213ENST00000533149 SH2D4AQ9H788 454 aa13.57□□□□□ -0.24
TRAPPC4-213ENST00000533149 MYH1P12882 1939 aa13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 MYADML2A6NDP7 307 aa13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 MYOGP15173 224 aa13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 ATP2A2P16615 1042 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 PLCD1P51178 756 aa13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 TMEM67Q5HYA8 995 aa13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 GNASQ5JWF2 1037 aa13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 MIGA1Q8NAN2 632 aa13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 RHPN1Q8TCX5 695 aa13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 KHSRPQ92945 711 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 KIF1BPQ96EK5 621 aa13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 ZNF512BQ96KM6 892 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 ARHGEF10LQ9HCE6 1279 aa13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 ZHX1Q9UKY1 873 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 ADAMTS5Q9UNA0 930 aa13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 ZNFX1Q9P2E3 1918 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 LRRC37A2A6NM11 1700 aa13.56□□□□□ -0.24
TRAPPC4-213ENST00000533149 GBF1Q92538 1859 aa13.55□□□□□ -0.24
TRAPPC4-213ENST00000533149 MUC6Q6W4X9 2439 aa13.55□□□□□ -0.24
TRAPPC4-213ENST00000533149 WDR46O15213 610 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-213ENST00000533149 POLR3DP05423 398 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC4-213ENST00000533149 STAT3P40763 770 aa13.55□□□□□ -0.24
TRAPPC4-213ENST00000533149 GJA9P57773 515 aa13.55□□□□□ -0.24
TRAPPC4-213ENST00000533149 TMED8Q6PL24 325 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC4-213ENST00000533149 MAMDC4Q6UXC1 1216 aa13.55□□□□□ -0.24
TRAPPC4-213ENST00000533149 TMEM179Q6ZVK1 233 aa13.55□□□□□ -0.24
TRAPPC4-213ENST00000533149 ERC1Q8IUD2 1116 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms