RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ADORA2AP29274 412 aa18.11■□□□□ 0.49
CPSF1-210ENST00000532935 GJA8P48165 433 aa18.11■□□□□ 0.49
CPSF1-210ENST00000532935 STAT2P52630 851 aa18.11■□□□□ 0.49
CPSF1-210ENST00000532935 BMP2KLQ5H9B9 411 aa18.11■□□□□ 0.49
CPSF1-210ENST00000532935 RCSD1Q6JBY9 416 aa18.11■□□□□ 0.49
CPSF1-210ENST00000532935 RASGRP2Q7LDG7 609 aa18.11■□□□□ 0.49
CPSF1-210ENST00000532935 TTC14Q96N46 770 aa18.11■□□□□ 0.49
CPSF1-210ENST00000532935 MTMR7Q9Y216 660 aa18.11■□□□□ 0.49
CPSF1-210ENST00000532935 FRMPD3Q5JV73 1810 aa18.1■□□□□ 0.49
CPSF1-210ENST00000532935 B4E1Z4 1266 aa18.1■□□□□ 0.49
CPSF1-210ENST00000532935 COPB2P35606 906 aa18.1■□□□□ 0.49
CPSF1-210ENST00000532935 MAP3K21Q5TCX8 1036 aa18.1■□□□□ 0.49
CPSF1-210ENST00000532935 KCTD1Q719H9 257 aa18.1■□□□□ 0.49
CPSF1-210ENST00000532935 FAM160B2Q86V87 743 aa18.1■□□□□ 0.49
CPSF1-210ENST00000532935 ABRAQ8N0Z2 381 aa18.1■□□□□ 0.49
CPSF1-210ENST00000532935 NPLOC4Q8TAT6 608 aa18.1■□□□□ 0.49
CPSF1-210ENST00000532935 CHURC1Q8WUH1 139 aa18.1■□□□□ 0.49
CPSF1-210ENST00000532935 DCAF4Q8WV16 495 aa18.1■□□□□ 0.49
CPSF1-210ENST00000532935 SHISA4Q96DD7 197 aa18.1■□□□□ 0.49
CPSF1-210ENST00000532935 ZKSCAN3Q9BRR0 538 aa18.1■□□□□ 0.49
CPSF1-210ENST00000532935 TEX13BQ9BXU2 312 aa18.1■□□□□ 0.49
CPSF1-210ENST00000532935 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.1■□□□□ 0.49
CPSF1-210ENST00000532935 SLC38A10Q9HBR0 1119 aa18.1■□□□□ 0.49
CPSF1-210ENST00000532935 PAK6Q9NQU5 681 aaPredicted RBP18.1■□□□□ 0.49
CPSF1-210ENST00000532935 CTDP1Q9Y5B0 961 aaPredicted RBP18.1■□□□□ 0.49
CPSF1-210ENST00000532935 U3KPZ7 1027 aaPredicted RBP18.1■□□□□ 0.49
CPSF1-210ENST00000532935 RPTORQ8N122 1335 aa18.09■□□□□ 0.49
CPSF1-210ENST00000532935 PLA2G6O60733 806 aa18.09■□□□□ 0.49
CPSF1-210ENST00000532935 FCER1AP12319 257 aa18.09■□□□□ 0.49
CPSF1-210ENST00000532935 PRKAR2AP13861 404 aaKnown RBP18.09■□□□□ 0.49
CPSF1-210ENST00000532935 IKQ13123 557 aaPredicted RBP18.09■□□□□ 0.49
CPSF1-210ENST00000532935 SNRNP48Q6IEG0 339 aaKnown RBP18.09■□□□□ 0.49
CPSF1-210ENST00000532935 DPP9Q86TI2 863 aa18.09■□□□□ 0.49
CPSF1-210ENST00000532935 IQCA1Q86XH1 822 aa18.09■□□□□ 0.49
CPSF1-210ENST00000532935 U2AF1L4Q8WU68 220 aaKnown RBP18.09■□□□□ 0.49
CPSF1-210ENST00000532935 KRT23Q9C075 422 aa18.09■□□□□ 0.49
CPSF1-210ENST00000532935 CNNM2Q9H8M5 875 aa18.09■□□□□ 0.49
CPSF1-210ENST00000532935 HMX1Q9NP08 348 aaPredicted RBP18.09■□□□□ 0.49
CPSF1-210ENST00000532935 FLRT1Q9NZU1 646 aa18.09■□□□□ 0.49
CPSF1-210ENST00000532935 SMCHD1A6NHR9 2005 aa18.09■□□□□ 0.49
CPSF1-210ENST00000532935 ATP2A1O14983 1001 aa18.08■□□□□ 0.48
CPSF1-210ENST00000532935 COBLO75128 1261 aa18.08■□□□□ 0.48
CPSF1-210ENST00000532935 SGPL1O95470 568 aa18.08■□□□□ 0.48
CPSF1-210ENST00000532935 CYP21A2P08686 494 aa18.08■□□□□ 0.48
CPSF1-210ENST00000532935 FDX1P10109 184 aa18.08■□□□□ 0.48
CPSF1-210ENST00000532935 CACNB2Q08289 660 aaPredicted RBP18.08■□□□□ 0.48
CPSF1-210ENST00000532935 CCDC96Q2M329 555 aa18.08■□□□□ 0.48
CPSF1-210ENST00000532935 CCDC178Q5BJE1 867 aa18.08■□□□□ 0.48
CPSF1-210ENST00000532935 DGKHQ86XP1 1220 aa18.08■□□□□ 0.48
CPSF1-210ENST00000532935 CPXCR1Q8N123 301 aa18.08■□□□□ 0.48
CPSF1-210ENST00000532935 DEFB118Q96PH6 123 aa18.08■□□□□ 0.48
CPSF1-210ENST00000532935 MMP19Q99542 508 aa18.08■□□□□ 0.48
CPSF1-210ENST00000532935 RAVER2Q9HCJ3 691 aaKnown RBP18.08■□□□□ 0.48
CPSF1-210ENST00000532935 ZSWIM5Q9P217 1185 aa18.08■□□□□ 0.48
CPSF1-210ENST00000532935 RIPK3Q9Y572 518 aa18.08■□□□□ 0.48
CPSF1-210ENST00000532935 OAZ1P54368 228 aa18.07■□□□□ 0.48
CPSF1-210ENST00000532935 MAP4K1Q92918 833 aa18.07■□□□□ 0.48
CPSF1-210ENST00000532935 ESYT1Q9BSJ8 1104 aa18.07■□□□□ 0.48
CPSF1-210ENST00000532935 SLC5A4Q9NY91 659 aa18.07■□□□□ 0.48
CPSF1-210ENST00000532935 PDHBP11177 359 aa18.06■□□□□ 0.48
CPSF1-210ENST00000532935 SLC4A3P48751 1232 aa18.06■□□□□ 0.48
CPSF1-210ENST00000532935 KCTD2Q14681 263 aa18.06■□□□□ 0.48
CPSF1-210ENST00000532935 MFSD14CQ5VZR4 134 aa18.06■□□□□ 0.48
CPSF1-210ENST00000532935 KIAA1211Q6ZU35 1233 aa18.06■□□□□ 0.48
CPSF1-210ENST00000532935 ANKS1AQ92625 1134 aa18.06■□□□□ 0.48
CPSF1-210ENST00000532935 ZSCAN10Q96SZ4 725 aaPredicted RBP18.06■□□□□ 0.48
CPSF1-210ENST00000532935 CRISPLD2Q9H0B8 497 aa18.06■□□□□ 0.48
CPSF1-210ENST00000532935 PRR12Q9ULL5 1215 aa18.06■□□□□ 0.48
CPSF1-210ENST00000532935 RBM8AQ9Y5S9 174 aaKnown RBP18.06■□□□□ 0.48
CPSF1-210ENST00000532935 MYH6P13533 1939 aa18.06■□□□□ 0.48
CPSF1-210ENST00000532935 TNKSO95271 1327 aa18.05■□□□□ 0.48
CPSF1-210ENST00000532935 FRMPD2Q68DX3 1309 aaPredicted RBP18.05■□□□□ 0.48
CPSF1-210ENST00000532935 IGHA2P01877 340 aa18.05■□□□□ 0.48
CPSF1-210ENST00000532935 TFRCP02786 760 aaKnown RBP18.05■□□□□ 0.48
CPSF1-210ENST00000532935 CAPN2P17655 700 aa18.05■□□□□ 0.48
CPSF1-210ENST00000532935 TRDNQ13061 729 aa18.05■□□□□ 0.48
CPSF1-210ENST00000532935 OLFML2BQ68BL8 750 aa18.05■□□□□ 0.48
CPSF1-210ENST00000532935 TTBK2Q6IQ55 1244 aa18.05■□□□□ 0.48
CPSF1-210ENST00000532935 ENAHQ8N8S7 591 aaPredicted RBP18.05■□□□□ 0.48
CPSF1-210ENST00000532935 LSG1Q9H089 658 aaKnown RBP18.05■□□□□ 0.48
CPSF1-210ENST00000532935 MCM3APO60318 1980 aa18.04■□□□□ 0.48
CPSF1-210ENST00000532935 ZNF536O15090 1300 aa18.04■□□□□ 0.48
CPSF1-210ENST00000532935 PGK2P07205 417 aa18.04■□□□□ 0.48
CPSF1-210ENST00000532935 SNHG28P0DPA3 235 aa18.04■□□□□ 0.48
CPSF1-210ENST00000532935 CCND3P30281 292 aaPredicted RBP18.04■□□□□ 0.48
CPSF1-210ENST00000532935 CYP2C19P33261 490 aa18.04■□□□□ 0.48
CPSF1-210ENST00000532935 ZNF543Q08ER8 600 aa18.04■□□□□ 0.48
CPSF1-210ENST00000532935 BTNL9Q6UXG8 535 aa18.04■□□□□ 0.48
CPSF1-210ENST00000532935 CYB5R4Q7L1T6 521 aa18.04■□□□□ 0.48
CPSF1-210ENST00000532935 PNMA1Q8ND90 353 aa18.04■□□□□ 0.48
CPSF1-210ENST00000532935 MAML3Q96JK9 1138 aa18.04■□□□□ 0.48
CPSF1-210ENST00000532935 UBAC1Q9BSL1 405 aa18.04■□□□□ 0.48
CPSF1-210ENST00000532935 KAT14Q9H8E8 782 aa18.04■□□□□ 0.48
CPSF1-210ENST00000532935 GPCPD1Q9NPB8 672 aa18.04■□□□□ 0.48
CPSF1-210ENST00000532935 TAF6LQ9Y6J9 622 aa18.04■□□□□ 0.48
CPSF1-210ENST00000532935 E7EWF7 191 aa18.03■□□□□ 0.48
CPSF1-210ENST00000532935 SLC16A2P36021 539 aa18.03■□□□□ 0.48
CPSF1-210ENST00000532935 SNAP25P60880 206 aa18.03■□□□□ 0.48
CPSF1-210ENST00000532935 SYDE2Q5VT97 1194 aa18.03■□□□□ 0.48
CPSF1-210ENST00000532935 ERICH6BQ5W0A0 696 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms