RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 ESR2Q92731 530 aa14.84□□□□□ -0.03
C11orf54-210ENST00000531516 DDX20Q9UHI6 824 aaKnown RBP14.84□□□□□ -0.03
C11orf54-210ENST00000531516 NRBP1Q9UHY1 535 aa14.84□□□□□ -0.03
C11orf54-210ENST00000531516 DIS3Q9Y2L1 958 aaKnown RBP14.84□□□□□ -0.03
C11orf54-210ENST00000531516 ATP2A1O14983 1001 aa14.83□□□□□ -0.04
C11orf54-210ENST00000531516 MCCP23508 829 aa14.83□□□□□ -0.04
C11orf54-210ENST00000531516 CCND3P30281 292 aaPredicted RBP14.83□□□□□ -0.04
C11orf54-210ENST00000531516 IRX6P78412 446 aaPredicted RBP14.83□□□□□ -0.04
C11orf54-210ENST00000531516 IMMTQ16891 758 aaKnown RBP14.83□□□□□ -0.04
C11orf54-210ENST00000531516 CCDC96Q2M329 555 aa14.83□□□□□ -0.04
C11orf54-210ENST00000531516 AKNAD1Q5T1N1 836 aa14.83□□□□□ -0.04
C11orf54-210ENST00000531516 ANKRD35Q8N283 1001 aa14.83□□□□□ -0.04
C11orf54-210ENST00000531516 ARRDC4Q8NCT1 418 aa14.83□□□□□ -0.04
C11orf54-210ENST00000531516 CHST13Q8NET6 341 aa14.83□□□□□ -0.04
C11orf54-210ENST00000531516 NPLOC4Q8TAT6 608 aa14.83□□□□□ -0.04
C11orf54-210ENST00000531516 STAG1Q8WVM7 1258 aa14.83□□□□□ -0.04
C11orf54-210ENST00000531516 ZNF214Q9UL59 606 aaPredicted RBP14.83□□□□□ -0.04
C11orf54-210ENST00000531516 CNPY2Q9Y2B0 182 aa14.83□□□□□ -0.04
C11orf54-210ENST00000531516 MYH8P13535 1937 aa14.82□□□□□ -0.04
C11orf54-210ENST00000531516 H0YGN5 161 aa14.82□□□□□ -0.04
C11orf54-210ENST00000531516 PLA2G6O60733 806 aa14.82□□□□□ -0.04
C11orf54-210ENST00000531516 TOP1P11387 765 aaKnown RBP14.82□□□□□ -0.04
C11orf54-210ENST00000531516 HAND2P61296 217 aa14.82□□□□□ -0.04
C11orf54-210ENST00000531516 RCSD1Q6JBY9 416 aa14.82□□□□□ -0.04
C11orf54-210ENST00000531516 ZNF589Q86UQ0 364 aaPredicted RBP14.82□□□□□ -0.04
C11orf54-210ENST00000531516 IQCA1Q86XH1 822 aa14.82□□□□□ -0.04
C11orf54-210ENST00000531516 DCAF4Q8WV16 495 aa14.82□□□□□ -0.04
C11orf54-210ENST00000531516 MAML3Q96JK9 1138 aa14.82□□□□□ -0.04
C11orf54-210ENST00000531516 TTC14Q96N46 770 aa14.82□□□□□ -0.04
C11orf54-210ENST00000531516 SLC38A10Q9HBR0 1119 aa14.82□□□□□ -0.04
C11orf54-210ENST00000531516 TCP11L1Q9NUJ3 509 aa14.82□□□□□ -0.04
C11orf54-210ENST00000531516 FLRT1Q9NZU1 646 aa14.82□□□□□ -0.04
C11orf54-210ENST00000531516 PNMA2Q9UL42 364 aa14.82□□□□□ -0.04
C11orf54-210ENST00000531516 MTMR7Q9Y216 660 aa14.82□□□□□ -0.04
C11orf54-210ENST00000531516 FOXP2O15409 715 aa14.81□□□□□ -0.04
C11orf54-210ENST00000531516 SEPT4O43236 478 aa14.81□□□□□ -0.04
C11orf54-210ENST00000531516 COBLO75128 1261 aa14.81□□□□□ -0.04
C11orf54-210ENST00000531516 FGRP09769 529 aa14.81□□□□□ -0.04
C11orf54-210ENST00000531516 TKFCQ3LXA3 575 aa14.81□□□□□ -0.04
C11orf54-210ENST00000531516 MSL3Q8N5Y2 521 aaKnown RBP14.81□□□□□ -0.04
C11orf54-210ENST00000531516 DSCC1Q9BVC3 393 aa14.81□□□□□ -0.04
C11orf54-210ENST00000531516 RAVER2Q9HCJ3 691 aaKnown RBP14.81□□□□□ -0.04
C11orf54-210ENST00000531516 KBTBD13C9JR72 458 aa14.8□□□□□ -0.04
C11orf54-210ENST00000531516 CYBAP13498 195 aa14.8□□□□□ -0.04
C11orf54-210ENST00000531516 TTC22Q5TAA0 569 aa14.8□□□□□ -0.04
C11orf54-210ENST00000531516 LHX8Q68G74 356 aa14.8□□□□□ -0.04
C11orf54-210ENST00000531516 REPS2Q8NFH8 660 aa14.8□□□□□ -0.04
C11orf54-210ENST00000531516 TINF2Q9BSI4 451 aa14.8□□□□□ -0.04
C11orf54-210ENST00000531516 KRT23Q9C075 422 aa14.8□□□□□ -0.04
C11orf54-210ENST00000531516 ACAD9Q9H845 621 aa14.8□□□□□ -0.04
C11orf54-210ENST00000531516 CNNM2Q9H8M5 875 aa14.8□□□□□ -0.04
C11orf54-210ENST00000531516 RAD50Q92878 1312 aa14.8□□□□□ -0.04
C11orf54-210ENST00000531516 DNM1LO00429 736 aa14.79□□□□□ -0.04
C11orf54-210ENST00000531516 NMT2O60551 498 aa14.79□□□□□ -0.04
C11orf54-210ENST00000531516 MYCNP04198 464 aaPredicted RBP14.79□□□□□ -0.04
C11orf54-210ENST00000531516 PGK2P07205 417 aa14.79□□□□□ -0.04
C11orf54-210ENST00000531516 RARBP10826 455 aa14.79□□□□□ -0.04
C11orf54-210ENST00000531516 TRDNQ13061 729 aa14.79□□□□□ -0.04
C11orf54-210ENST00000531516 ZNF792Q3KQV3 632 aa14.79□□□□□ -0.04
C11orf54-210ENST00000531516 KCTD1Q719H9 257 aa14.79□□□□□ -0.04
C11orf54-210ENST00000531516 DIS3LQ8TF46 1054 aaKnown RBP14.79□□□□□ -0.04
C11orf54-210ENST00000531516 INCENPQ9NQS7 918 aa14.79□□□□□ -0.04
C11orf54-210ENST00000531516 IL17RBQ9NRM6 502 aa14.79□□□□□ -0.04
C11orf54-210ENST00000531516 HABP4Q5JVS0 413 aaKnown RBP14.78□□□□□ -0.04
C11orf54-210ENST00000531516 C7orf61Q8IZ16 206 aa14.78□□□□□ -0.04
C11orf54-210ENST00000531516 CHMP4CQ96CF2 233 aa14.78□□□□□ -0.04
C11orf54-210ENST00000531516 UBAC1Q9BSL1 405 aa14.78□□□□□ -0.04
C11orf54-210ENST00000531516 KAT14Q9H8E8 782 aa14.78□□□□□ -0.04
C11orf54-210ENST00000531516 HOMER2Q9NSB8 354 aa14.78□□□□□ -0.04
C11orf54-210ENST00000531516 PFASO15067 1338 aa14.77□□□□□ -0.04
C11orf54-210ENST00000531516 SYNGAP1Q96PV0 1343 aa14.77□□□□□ -0.04
C11orf54-210ENST00000531516 MKI67P46013 3256 aaKnown RBP14.77□□□□□ -0.04
C11orf54-210ENST00000531516 POTEB2H3BUK9 544 aa14.77□□□□□ -0.05
C11orf54-210ENST00000531516 AKR1A1P14550 325 aa14.77□□□□□ -0.05
C11orf54-210ENST00000531516 CHRDL2Q6WN34 429 aa14.77□□□□□ -0.05
C11orf54-210ENST00000531516 ZNF467Q7Z7K2 595 aaPredicted RBP14.77□□□□□ -0.05
C11orf54-210ENST00000531516 RNF180Q86T96 592 aa14.77□□□□□ -0.05
C11orf54-210ENST00000531516 DGKHQ86XP1 1220 aa14.77□□□□□ -0.05
C11orf54-210ENST00000531516 TMEM47Q9BQJ4 181 aa14.77□□□□□ -0.05
C11orf54-210ENST00000531516 SENP6Q9GZR1 1112 aaPredicted RBP14.77□□□□□ -0.05
C11orf54-210ENST00000531516 SPC25Q9HBM1 224 aa14.77□□□□□ -0.05
C11orf54-210ENST00000531516 RNF146Q9NTX7 359 aa14.77□□□□□ -0.05
C11orf54-210ENST00000531516 PRKAG2Q9UGJ0 569 aa14.77□□□□□ -0.05
C11orf54-210ENST00000531516 CCPG1Q9ULG6 757 aa14.77□□□□□ -0.05
C11orf54-210ENST00000531516 RIPK3Q9Y572 518 aa14.77□□□□□ -0.05
C11orf54-210ENST00000531516 ALAS1P13196 640 aa14.76□□□□□ -0.05
C11orf54-210ENST00000531516 NOVP48745 357 aa14.76□□□□□ -0.05
C11orf54-210ENST00000531516 GPATCH4Q5T3I0 446 aaKnown RBP14.76□□□□□ -0.05
C11orf54-210ENST00000531516 SYDE2Q5VT97 1194 aa14.76□□□□□ -0.05
C11orf54-210ENST00000531516 CCDC174Q6PII3 467 aa14.76□□□□□ -0.05
C11orf54-210ENST00000531516 KIAA1211Q6ZU35 1233 aa14.76□□□□□ -0.05
C11orf54-210ENST00000531516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.76□□□□□ -0.05
C11orf54-210ENST00000531516 TRERF1Q96PN7 1200 aa14.76□□□□□ -0.05
C11orf54-210ENST00000531516 MPHOSPH6Q99547 160 aaKnown RBP14.76□□□□□ -0.05
C11orf54-210ENST00000531516 FAM184BQ9ULE4 1060 aa14.76□□□□□ -0.05
C11orf54-210ENST00000531516 PRR12Q9ULL5 1215 aa14.76□□□□□ -0.05
C11orf54-210ENST00000531516 COLQQ9Y215 455 aaPredicted RBP14.76□□□□□ -0.05
C11orf54-210ENST00000531516 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
C11orf54-210ENST00000531516 DOCK3Q8IZD9 2030 aa14.76□□□□□ -0.05
C11orf54-210ENST00000531516 A0A0G2JMZ2 1700 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms