RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 C12orf60Q5U649 245 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 SNRNP48Q6IEG0 339 aaKnown RBP11.11□□□□□ -0.63
NEDD8-206ENST00000531430 MFSD5Q6N075 450 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 CCDC174Q6PII3 467 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 ANKRD35Q8N283 1001 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 TMEM199Q8N511 208 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 CHMP4CQ96CF2 233 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 TOX2Q96NM4 488 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 TSEN34Q9BSV6 310 aaKnown RBP11.11□□□□□ -0.63
NEDD8-206ENST00000531430 MKNK2Q9HBH9 465 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 ATP8A2Q9NTI2 1148 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 MSRAQ9UJ68 235 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 PPP1R9AQ9ULJ8 1098 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 SLC4A4Q9Y6R1 1079 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 TTC28Q96AY4 2481 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 SYNRGQ9UMZ2 1314 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 TCRBV5S4A2TA0A5A2 114 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 MYADML2A6NDP7 307 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 MOXD2PA6NHM9 499 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 MINDY4BA8MYZ0 360 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 ZBED4O75132 1171 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 ADAMTS4O75173 837 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 CSF2RAP15509 400 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 ACVR2BQ13705 512 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 ZNF365Q70YC5 407 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 ANKRD33Q7Z3H0 272 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 MICALL1Q8N3F8 863 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 KIFC2Q96AC6 838 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 SLF1Q9BQI6 1058 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 PBX4Q9BYU1 374 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.1□□□□□ -0.63
NEDD8-206ENST00000531430 PAG1Q9NWQ8 432 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 ADAMTS5Q9UNA0 930 aa11.1□□□□□ -0.63
NEDD8-206ENST00000531430 TLR3O15455 904 aaKnown RBP11.09□□□□□ -0.63
NEDD8-206ENST00000531430 DUSP11O75319 330 aaKnown RBP11.09□□□□□ -0.63
NEDD8-206ENST00000531430 SNAI1O95863 264 aaPredicted RBP11.09□□□□□ -0.63
NEDD8-206ENST00000531430 CHGBP05060 677 aa11.09□□□□□ -0.63
NEDD8-206ENST00000531430 ASGR1P07306 291 aa11.09□□□□□ -0.63
NEDD8-206ENST00000531430 CYP2C18P33260 490 aa11.09□□□□□ -0.63
NEDD8-206ENST00000531430 COPB2P35606 906 aa11.09□□□□□ -0.63
NEDD8-206ENST00000531430 ADD2P35612 726 aa11.09□□□□□ -0.63
NEDD8-206ENST00000531430 TMEM240Q5SV17 173 aa11.09□□□□□ -0.63
NEDD8-206ENST00000531430 C16orf59Q7L2K0 433 aa11.09□□□□□ -0.63
NEDD8-206ENST00000531430 PCSK9Q8NBP7 692 aaKnown RBP11.09□□□□□ -0.63
NEDD8-206ENST00000531430 KLHDC9Q8NEP7 349 aa11.09□□□□□ -0.63
NEDD8-206ENST00000531430 PANK1Q8TE04 598 aa11.09□□□□□ -0.63
NEDD8-206ENST00000531430 KIF1BPQ96EK5 621 aa11.09□□□□□ -0.63
NEDD8-206ENST00000531430 RAVER2Q9HCJ3 691 aaKnown RBP11.09□□□□□ -0.63
NEDD8-206ENST00000531430 CLIP2Q9UDT6 1046 aa11.09□□□□□ -0.63
NEDD8-206ENST00000531430 ZNF214Q9UL59 606 aaPredicted RBP11.09□□□□□ -0.63
NEDD8-206ENST00000531430 RIPK3Q9Y572 518 aa11.09□□□□□ -0.63
NEDD8-206ENST00000531430 F5H6K3 240 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 ARVCFO00192 962 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 FGBP02675 491 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 BEX3Q00994 111 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 KLRC3Q07444 240 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 CCDC144BQ3MJ40 725 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 CTR9Q6PD62 1173 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 C16orf86Q6ZW13 317 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 OTOP2Q7RTS6 562 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 PRPF38AQ8NAV1 312 aaKnown RBP11.08□□□□□ -0.64
NEDD8-206ENST00000531430 ATXN2LQ8WWM7 1075 aaKnown RBP11.08□□□□□ -0.64
NEDD8-206ENST00000531430 ASB2Q96Q27 587 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 TEX13BQ9BXU2 312 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 NKX2-4Q9H2Z4 354 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 SLC28A3Q9HAS3 691 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 HOMER2Q9NSB8 354 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.08□□□□□ -0.64
NEDD8-206ENST00000531430 NAV1Q8NEY1 1877 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 ELP1O95163 1332 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 MROH7Q68CQ1 1323 aa11.08□□□□□ -0.64
NEDD8-206ENST00000531430 A0A0U1RQG5 324 aaPredicted RBP11.07□□□□□ -0.64
NEDD8-206ENST00000531430 CDK7P50613 346 aa11.07□□□□□ -0.64
NEDD8-206ENST00000531430 CCL23P55773 120 aa11.07□□□□□ -0.64
NEDD8-206ENST00000531430 MRPS5P82675 430 aaKnown RBP11.07□□□□□ -0.64
NEDD8-206ENST00000531430 SKIV2LQ15477 1246 aaKnown RBP11.07□□□□□ -0.64
NEDD8-206ENST00000531430 ZNF444Q8N0Y2 327 aaPredicted RBP11.07□□□□□ -0.64
NEDD8-206ENST00000531430 ADAMTS19Q8TE59 1207 aa11.07□□□□□ -0.64
NEDD8-206ENST00000531430 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.07□□□□□ -0.64
NEDD8-206ENST00000531430 TSPYL2Q9H2G4 693 aaPredicted RBP11.07□□□□□ -0.64
NEDD8-206ENST00000531430 THEGQ9P2T0 379 aa11.07□□□□□ -0.64
NEDD8-206ENST00000531430 TBX21Q9UL17 535 aa11.07□□□□□ -0.64
NEDD8-206ENST00000531430 ZBBXA8MT70 800 aa11.06□□□□□ -0.64
NEDD8-206ENST00000531430 CCER2I3L3R5 266 aa11.06□□□□□ -0.64
NEDD8-206ENST00000531430 DYNC1LI2O43237 492 aaPredicted RBP11.06□□□□□ -0.64
NEDD8-206ENST00000531430 HMMRO75330 724 aa11.06□□□□□ -0.64
NEDD8-206ENST00000531430 APPP05067 770 aa11.06□□□□□ -0.64
NEDD8-206ENST00000531430 RABGGTBP53611 331 aa11.06□□□□□ -0.64
NEDD8-206ENST00000531430 HNRNPUQ00839 825 aaKnown RBP eCLIP11.06□□□□□ -0.64
NEDD8-206ENST00000531430 IKQ13123 557 aaPredicted RBP11.06□□□□□ -0.64
NEDD8-206ENST00000531430 ADGRE1Q14246 886 aa11.06□□□□□ -0.64
NEDD8-206ENST00000531430 RAB30Q15771 203 aa11.06□□□□□ -0.64
NEDD8-206ENST00000531430 CCSAPQ6IQ19 270 aaPredicted RBP11.06□□□□□ -0.64
NEDD8-206ENST00000531430 ZSCAN25Q6NSZ9 544 aa11.06□□□□□ -0.64
NEDD8-206ENST00000531430 PSRC1Q6PGN9 363 aaPredicted RBP11.06□□□□□ -0.64
NEDD8-206ENST00000531430 CXCL17Q6UXB2 119 aa11.06□□□□□ -0.64
NEDD8-206ENST00000531430 MSL3Q8N5Y2 521 aaKnown RBP11.06□□□□□ -0.64
NEDD8-206ENST00000531430 REPS2Q8NFH8 660 aa11.06□□□□□ -0.64
NEDD8-206ENST00000531430 UHRF1Q96T88 793 aaPredicted RBP11.06□□□□□ -0.64
NEDD8-206ENST00000531430 MTIF3Q9H2K0 278 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms