RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 IKQ13123 557 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-221ENST00000531068 RRP12Q5JTH9 1297 aaKnown RBP12.96□□□□□ -0.33
CAPN1-221ENST00000531068 AKNAD1Q5T1N1 836 aa12.96□□□□□ -0.33
CAPN1-221ENST00000531068 TTC22Q5TAA0 569 aa12.96□□□□□ -0.33
CAPN1-221ENST00000531068 RCSD1Q6JBY9 416 aa12.96□□□□□ -0.33
CAPN1-221ENST00000531068 REPS2Q8NFH8 660 aa12.96□□□□□ -0.33
CAPN1-221ENST00000531068 STAG1Q8WVM7 1258 aa12.96□□□□□ -0.33
CAPN1-221ENST00000531068 PAWRQ96IZ0 340 aaKnown RBP12.96□□□□□ -0.33
CAPN1-221ENST00000531068 TTC14Q96N46 770 aa12.96□□□□□ -0.33
CAPN1-221ENST00000531068 IL17RBQ9NRM6 502 aa12.96□□□□□ -0.33
CAPN1-221ENST00000531068 FLRT1Q9NZU1 646 aa12.96□□□□□ -0.33
CAPN1-221ENST00000531068 DIS3Q9Y2L1 958 aaKnown RBP12.96□□□□□ -0.33
CAPN1-221ENST00000531068 PTPRFP10586 1907 aa12.96□□□□□ -0.34
CAPN1-221ENST00000531068 NAV1Q8NEY1 1877 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 KIAA0100Q14667 2235 aaKnown RBP12.95□□□□□ -0.34
CAPN1-221ENST00000531068 PLA2G6O60733 806 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 COBLO75128 1261 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 CNGA1P29973 690 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 CCND3P30281 292 aaPredicted RBP12.95□□□□□ -0.34
CAPN1-221ENST00000531068 CYP2C19P33261 490 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 NOVP48745 357 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 STAT2P52630 851 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 CCDC178Q5BJE1 867 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 LHX8Q68G74 356 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 SNRNP48Q6IEG0 339 aaKnown RBP12.95□□□□□ -0.34
CAPN1-221ENST00000531068 CPXCR1Q8N123 301 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 RUFY2Q8WXA3 655 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 ESR2Q92731 530 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 DDX11Q96FC9 970 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 DSCC1Q9BVC3 393 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 SLC38A10Q9HBR0 1119 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 FBXO40Q9UH90 709 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 NRBP1Q9UHY1 535 aa12.95□□□□□ -0.34
CAPN1-221ENST00000531068 EVI5O60447 810 aa12.94□□□□□ -0.34
CAPN1-221ENST00000531068 NMT2O60551 498 aa12.94□□□□□ -0.34
CAPN1-221ENST00000531068 IGHA2P01877 340 aa12.94□□□□□ -0.34
CAPN1-221ENST00000531068 TOP1P11387 765 aaKnown RBP12.94□□□□□ -0.34
CAPN1-221ENST00000531068 HAND2P61296 217 aa12.94□□□□□ -0.34
CAPN1-221ENST00000531068 IMMTQ16891 758 aaKnown RBP12.94□□□□□ -0.34
CAPN1-221ENST00000531068 CHST13Q8NET6 341 aa12.94□□□□□ -0.34
CAPN1-221ENST00000531068 DCAF4Q8WV16 495 aa12.94□□□□□ -0.34
CAPN1-221ENST00000531068 MAML3Q96JK9 1138 aa12.94□□□□□ -0.34
CAPN1-221ENST00000531068 C11orf49Q9H6J7 331 aa12.94□□□□□ -0.34
CAPN1-221ENST00000531068 DDX20Q9UHI6 824 aaKnown RBP12.94□□□□□ -0.34
CAPN1-221ENST00000531068 TACC3Q9Y6A5 838 aa12.94□□□□□ -0.34
CAPN1-221ENST00000531068 CENPFP49454 3210 aa12.94□□□□□ -0.34
CAPN1-221ENST00000531068 ATAD5Q96QE3 1844 aa12.94□□□□□ -0.34
CAPN1-221ENST00000531068 ZSWIM8A7E2V4 1837 aa12.93□□□□□ -0.34
CAPN1-221ENST00000531068 H0YGN5 161 aa12.93□□□□□ -0.34
CAPN1-221ENST00000531068 SLC4A3P48751 1232 aa12.93□□□□□ -0.34
CAPN1-221ENST00000531068 ZNF792Q3KQV3 632 aa12.93□□□□□ -0.34
CAPN1-221ENST00000531068 MSL3Q8N5Y2 521 aaKnown RBP12.93□□□□□ -0.34
CAPN1-221ENST00000531068 ARRDC4Q8NCT1 418 aa12.93□□□□□ -0.34
CAPN1-221ENST00000531068 IPO9Q96P70 1041 aaKnown RBP12.93□□□□□ -0.34
CAPN1-221ENST00000531068 RAVER2Q9HCJ3 691 aaKnown RBP12.93□□□□□ -0.34
CAPN1-221ENST00000531068 SEPT4O43236 478 aa12.92□□□□□ -0.34
CAPN1-221ENST00000531068 PGK2P07205 417 aa12.92□□□□□ -0.34
CAPN1-221ENST00000531068 CYBAP13498 195 aa12.92□□□□□ -0.34
CAPN1-221ENST00000531068 TKFCQ3LXA3 575 aa12.92□□□□□ -0.34
CAPN1-221ENST00000531068 IQCA1Q86XH1 822 aa12.92□□□□□ -0.34
CAPN1-221ENST00000531068 DGKHQ86XP1 1220 aa12.92□□□□□ -0.34
CAPN1-221ENST00000531068 ANKRD35Q8N283 1001 aa12.92□□□□□ -0.34
CAPN1-221ENST00000531068 TMEM47Q9BQJ4 181 aa12.92□□□□□ -0.34
CAPN1-221ENST00000531068 CNPY2Q9Y2B0 182 aa12.92□□□□□ -0.34
CAPN1-221ENST00000531068 RIPK3Q9Y572 518 aa12.92□□□□□ -0.34
CAPN1-221ENST00000531068 CCDC96Q2M329 555 aa12.91□□□□□ -0.34
CAPN1-221ENST00000531068 KCTD1Q719H9 257 aa12.91□□□□□ -0.34
CAPN1-221ENST00000531068 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.91□□□□□ -0.34
CAPN1-221ENST00000531068 TBC1D10CQ8IV04 446 aa12.91□□□□□ -0.34
CAPN1-221ENST00000531068 TRPV1Q8NER1 839 aa12.91□□□□□ -0.34
CAPN1-221ENST00000531068 DIS3LQ8TF46 1054 aaKnown RBP12.91□□□□□ -0.34
CAPN1-221ENST00000531068 TINF2Q9BSI4 451 aa12.91□□□□□ -0.34
CAPN1-221ENST00000531068 KRT23Q9C075 422 aa12.91□□□□□ -0.34
CAPN1-221ENST00000531068 CNNM2Q9H8M5 875 aa12.91□□□□□ -0.34
CAPN1-221ENST00000531068 PNMA2Q9UL42 364 aa12.91□□□□□ -0.34
CAPN1-221ENST00000531068 RAD50Q92878 1312 aa12.9□□□□□ -0.34
CAPN1-221ENST00000531068 SEC24BO95487 1268 aa12.9□□□□□ -0.34
CAPN1-221ENST00000531068 CHMLP26374 656 aa12.9□□□□□ -0.34
CAPN1-221ENST00000531068 MNX1P50219 401 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-221ENST00000531068 BTNL9Q6UXG8 535 aa12.9□□□□□ -0.34
CAPN1-221ENST00000531068 ZNF467Q7Z7K2 595 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-221ENST00000531068 CHMP4CQ96CF2 233 aa12.9□□□□□ -0.34
CAPN1-221ENST00000531068 ACAD9Q9H845 621 aa12.9□□□□□ -0.34
CAPN1-221ENST00000531068 PRR12Q9ULL5 1215 aa12.9□□□□□ -0.34
CAPN1-221ENST00000531068 MTMR7Q9Y216 660 aa12.9□□□□□ -0.34
CAPN1-221ENST00000531068 TNRC18O15417 2968 aaPredicted RBP12.9□□□□□ -0.35
CAPN1-221ENST00000531068 DNAJC25-GNG10A0A024R161 153 aa12.89□□□□□ -0.35
CAPN1-221ENST00000531068 DNM1LO00429 736 aa12.89□□□□□ -0.35
CAPN1-221ENST00000531068 KDM4AO75164 1064 aa12.89□□□□□ -0.35
CAPN1-221ENST00000531068 PRAMEF19Q5SWL8 479 aa12.89□□□□□ -0.35
CAPN1-221ENST00000531068 GPATCH4Q5T3I0 446 aaKnown RBP12.89□□□□□ -0.35
CAPN1-221ENST00000531068 MAMDC4Q6UXC1 1216 aa12.89□□□□□ -0.35
CAPN1-221ENST00000531068 AGBL1Q96MI9 1066 aa12.89□□□□□ -0.35
CAPN1-221ENST00000531068 TRERF1Q96PN7 1200 aa12.89□□□□□ -0.35
CAPN1-221ENST00000531068 U3KPZ7 1027 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-221ENST00000531068 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 BAZ2AQ9UIF9 1905 aaKnown RBP12.88□□□□□ -0.35
CAPN1-221ENST00000531068 KBTBD13C9JR72 458 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 POTEB2H3BUK9 544 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 RARBP10826 455 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms