RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 ZBTB9Q96C00 473 aa9.35□□□□□ -0.91
CTNND1-227ENST00000530748 MAGEF1Q9HAY2 307 aa9.35□□□□□ -0.91
CTNND1-227ENST00000530748 TRPC6Q9Y210 931 aa9.35□□□□□ -0.91
CTNND1-227ENST00000530748 CDC42BPGQ6DT37 1551 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 PREX2Q70Z35 1606 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 GTPBP6O43824 516 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-227ENST00000530748 TBC1D8O95759 1140 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 U2AF2P26368 475 aaKnown RBP eCLIP9.34□□□□□ -0.911e-10■■□□□ 14
CTNND1-227ENST00000530748 BAG6P46379 1132 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 FAM160B1Q5W0V3 765 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 FANCBQ8NB91 859 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 RSAD2Q8WXG1 361 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 RPGRIP1Q96KN7 1286 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 PALM3A6NDB9 673 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-227ENST00000530748 RPN1P04843 607 aaKnown RBP9.34□□□□□ -0.91
CTNND1-227ENST00000530748 NEDD9Q14511 834 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 EAPPQ56P03 285 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-227ENST00000530748 GADL1Q6ZQY3 521 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 CACNA2D3Q8IZS8 1091 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 SDR42E1Q8WUS8 393 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 FAM207AQ9NSI2 230 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-227ENST00000530748 GINS2Q9Y248 185 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 TNKSO95271 1327 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 HECW2Q9P2P5 1572 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 SPOUT1Q5T280 376 aaKnown RBP9.34□□□□□ -0.91
CTNND1-227ENST00000530748 GBP6Q6ZN66 633 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 CMTR1Q8N1G2 835 aaKnown RBP9.34□□□□□ -0.91
CTNND1-227ENST00000530748 LRRC47Q8N1G4 583 aaKnown RBP9.34□□□□□ -0.91
CTNND1-227ENST00000530748 METTL13Q8N6R0 699 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 IL17REQ8NFR9 667 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 MYRIPQ8NFW9 859 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 TRIM58Q8NG06 486 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 XPO4Q9C0E2 1151 aaKnown RBP9.34□□□□□ -0.91
CTNND1-227ENST00000530748 TPCN1Q9ULQ1 816 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 M0R2C6 588 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 PHBP35232 272 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 DMP1Q13316 513 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-227ENST00000530748 TTLL7Q6ZT98 887 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 SND1Q7KZF4 910 aaKnown RBP eCLIP9.34□□□□□ -0.91
CTNND1-227ENST00000530748 FNBP4Q8N3X1 1017 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-227ENST00000530748 SLC17A8Q8NDX2 589 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 GLG1Q92896 1179 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 PLEKHF1Q96S99 279 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 VPS37BQ9H9H4 285 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 GPR108Q9NPR9 543 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 KIAA1468Q9P260 1216 aa9.34□□□□□ -0.91
CTNND1-227ENST00000530748 LAD1O00515 517 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 GIPC1O14908 333 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 ZNF131P52739 623 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 LRRC24Q50LG9 513 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 SMCR8Q8TEV9 937 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-227ENST00000530748 FMNL1O95466 1100 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-227ENST00000530748 CMA1P23946 247 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 BIRC2Q13490 618 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 PNMA1Q8ND90 353 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 GPKOWQ92917 476 aaPredicted RBP eCLIP9.33□□□□□ -0.92
CTNND1-227ENST00000530748 XDHP47989 1333 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 NPHP4O75161 1426 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-227ENST00000530748 MAGI3Q5TCQ9 1506 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 ALAS1P13196 640 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 YARSP54577 528 aaKnown RBP9.33□□□□□ -0.92
CTNND1-227ENST00000530748 ADKP55263 362 aaKnown RBP9.33□□□□□ -0.92
CTNND1-227ENST00000530748 UBE3CQ15386 1083 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 HADHQ16836 314 aaKnown RBP9.33□□□□□ -0.92
CTNND1-227ENST00000530748 XKR9Q5GH70 373 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 CASC4Q6P4E1 433 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 PAGR1Q9BTK6 254 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 USP44Q9H0E7 712 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 ZNF804BA4D1E1 1349 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 STAT1P42224 750 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 ICA1Q05084 483 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 ZCCHC11Q5TAX3 1644 aaKnown RBP9.33□□□□□ -0.92
CTNND1-227ENST00000530748 ARHGAP24Q8N264 748 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 STAMQ92783 540 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 SPC25Q9HBM1 224 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 HYOU1Q9Y4L1 999 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 ABCA8O94911 1581 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 GOLGA8KD6RF30 607 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 ERCC3P19447 782 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 CDC25BP30305 580 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 SARNPP82979 210 aaKnown RBP9.33□□□□□ -0.92
CTNND1-227ENST00000530748 KIF22Q14807 665 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 DOK7Q18PE1 504 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 C1orf112Q9NSG2 853 aa9.33□□□□□ -0.92
CTNND1-227ENST00000530748 NR1I2O75469 434 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 CRKLP46109 303 aaKnown RBP9.32□□□□□ -0.92
CTNND1-227ENST00000530748 SCNN1DP51172 638 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 DCPSQ96C86 337 aaKnown RBP9.32□□□□□ -0.92
CTNND1-227ENST00000530748 EDC3Q96F86 508 aaKnown RBP9.32□□□□□ -0.92
CTNND1-227ENST00000530748 LSG1Q9H089 658 aaKnown RBP9.32□□□□□ -0.92
CTNND1-227ENST00000530748 PCDHA4Q9UN74 947 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 PCDHA12Q9UN75 941 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 KLRF2D3W0D1 207 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 NDUFAB1O14561 156 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 PIK3CAP42336 1068 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 PLA2G4DQ86XP0 818 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 RDH13Q8NBN7 331 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 SYMPKQ92797 1274 aaKnown RBP9.32□□□□□ -0.92
CTNND1-227ENST00000530748 FEZ2Q9UHY8 353 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-227ENST00000530748 SAR1BQ9Y6B6 198 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms