RNA–Protein interactions for RNA: ENST00000530405.5

PACSIN3-206, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-206ENST00000530405 LCORLQ8N3X6 602 aa19.72■□□□□ 0.75
PACSIN3-206ENST00000530405 TMEM199Q8N511 208 aa19.72■□□□□ 0.75
PACSIN3-206ENST00000530405 CHD7Q9P2D1 2997 aa19.71■□□□□ 0.75
PACSIN3-206ENST00000530405 SNAI1O95863 264 aaPredicted RBP19.71■□□□□ 0.75
PACSIN3-206ENST00000530405 EEF2P13639 858 aaKnown RBP19.71■□□□□ 0.75
PACSIN3-206ENST00000530405 CSF2RAP15509 400 aa19.71■□□□□ 0.75
PACSIN3-206ENST00000530405 PLA2G5P39877 138 aa19.71■□□□□ 0.75
PACSIN3-206ENST00000530405 PCSK9Q8NBP7 692 aaKnown RBP19.71■□□□□ 0.75
PACSIN3-206ENST00000530405 UHRF1Q96T88 793 aaPredicted RBP19.71■□□□□ 0.75
PACSIN3-206ENST00000530405 KANSL2Q9H9L4 492 aa19.71■□□□□ 0.75
PACSIN3-206ENST00000530405 ATP8A2Q9NTI2 1148 aa19.71■□□□□ 0.75
PACSIN3-206ENST00000530405 CDK8P49336 464 aa19.7■□□□□ 0.74
PACSIN3-206ENST00000530405 ADGRE1Q14246 886 aa19.7■□□□□ 0.74
PACSIN3-206ENST00000530405 RAB30Q15771 203 aa19.7■□□□□ 0.74
PACSIN3-206ENST00000530405 ZNF365Q70YC5 407 aa19.7■□□□□ 0.74
PACSIN3-206ENST00000530405 GOPCQ9HD26 462 aa19.7■□□□□ 0.74
PACSIN3-206ENST00000530405 MSRAQ9UJ68 235 aa19.7■□□□□ 0.74
PACSIN3-206ENST00000530405 BAZ2AQ9UIF9 1905 aaKnown RBP19.69■□□□□ 0.74
PACSIN3-206ENST00000530405 DNAJC25-GNG10A0A024R161 153 aa19.69■□□□□ 0.74
PACSIN3-206ENST00000530405 A0A0U1RQG5 324 aaPredicted RBP19.69■□□□□ 0.74
PACSIN3-206ENST00000530405 MYADML2A6NDP7 307 aa19.69■□□□□ 0.74
PACSIN3-206ENST00000530405 ARVCFO00192 962 aa19.69■□□□□ 0.74
PACSIN3-206ENST00000530405 ASGR1P07306 291 aa19.69■□□□□ 0.74
PACSIN3-206ENST00000530405 C12orf60Q5U649 245 aa19.69■□□□□ 0.74
PACSIN3-206ENST00000530405 ZNF467Q7Z7K2 595 aaPredicted RBP19.69■□□□□ 0.74
PACSIN3-206ENST00000530405 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.69■□□□□ 0.74
PACSIN3-206ENST00000530405 DDX11Q96FC9 970 aa19.69■□□□□ 0.74
PACSIN3-206ENST00000530405 TEX13BQ9BXU2 312 aa19.69■□□□□ 0.74
PACSIN3-206ENST00000530405 ZHX1Q9UKY1 873 aaPredicted RBP19.69■□□□□ 0.74
PACSIN3-206ENST00000530405 C6orf222P0C671 652 aaPredicted RBP19.68■□□□□ 0.74
PACSIN3-206ENST00000530405 ACRP10323 421 aa19.68■□□□□ 0.74
PACSIN3-206ENST00000530405 CCDC85BQ15834 202 aaPredicted RBP19.68■□□□□ 0.74
PACSIN3-206ENST00000530405 FAM83BQ5T0W9 1011 aa19.68■□□□□ 0.74
PACSIN3-206ENST00000530405 C16orf86Q6ZW13 317 aa19.68■□□□□ 0.74
PACSIN3-206ENST00000530405 FAM126BQ8IXS8 530 aa19.68■□□□□ 0.74
PACSIN3-206ENST00000530405 IL27Q8NEV9 243 aa19.68■□□□□ 0.74
PACSIN3-206ENST00000530405 HERVK_113Q902F9 699 aa19.68■□□□□ 0.74
PACSIN3-206ENST00000530405 UPF3AQ9H1J1 476 aaKnown RBP19.68■□□□□ 0.74
PACSIN3-206ENST00000530405 ARMT1Q9H993 441 aa19.68■□□□□ 0.74
PACSIN3-206ENST00000530405 SPC25Q9HBM1 224 aa19.68■□□□□ 0.74
PACSIN3-206ENST00000530405 EXOC6BQ9Y2D4 811 aa19.68■□□□□ 0.74
PACSIN3-206ENST00000530405 REV3LO60673 3130 aa19.68■□□□□ 0.74
PACSIN3-206ENST00000530405 GOLIM4O00461 696 aa19.67■□□□□ 0.74
PACSIN3-206ENST00000530405 TLR3O15455 904 aaKnown RBP19.67■□□□□ 0.74
PACSIN3-206ENST00000530405 IGFBP4P22692 258 aa19.67■□□□□ 0.74
PACSIN3-206ENST00000530405 GJA9P57773 515 aa19.67■□□□□ 0.74
PACSIN3-206ENST00000530405 ACVR2BQ13705 512 aa19.67■□□□□ 0.74
PACSIN3-206ENST00000530405 AMOTL1Q8IY63 956 aa19.67■□□□□ 0.74
PACSIN3-206ENST00000530405 VTI1AQ96AJ9 217 aa19.67■□□□□ 0.74
PACSIN3-206ENST00000530405 FAM122AQ96E09 287 aa19.67■□□□□ 0.74
PACSIN3-206ENST00000530405 PPP1R12CQ9BZL4 782 aa19.67■□□□□ 0.74
PACSIN3-206ENST00000530405 MTIF3Q9H2K0 278 aaKnown RBP19.67■□□□□ 0.74
PACSIN3-206ENST00000530405 ABHD16BQ9H3Z7 469 aa19.67■□□□□ 0.74
PACSIN3-206ENST00000530405 SLC28A3Q9HAS3 691 aa19.67■□□□□ 0.74
PACSIN3-206ENST00000530405 IL23AQ9NPF7 189 aa19.67■□□□□ 0.74
PACSIN3-206ENST00000530405 XIRP2A4UGR9 3374 aa19.66■□□□□ 0.74
PACSIN3-206ENST00000530405 PRKAB2O43741 272 aa19.66■□□□□ 0.74
PACSIN3-206ENST00000530405 IRX5P78411 483 aaPredicted RBP19.66■□□□□ 0.74
PACSIN3-206ENST00000530405 GNASQ5JWF2 1037 aa19.66■□□□□ 0.74
PACSIN3-206ENST00000530405 SNRNP48Q6IEG0 339 aaKnown RBP19.66■□□□□ 0.74
PACSIN3-206ENST00000530405 CEP85Q6P2H3 762 aa19.66■□□□□ 0.74
PACSIN3-206ENST00000530405 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.66■□□□□ 0.74
PACSIN3-206ENST00000530405 SLF1Q9BQI6 1058 aa19.66■□□□□ 0.74
PACSIN3-206ENST00000530405 RIPK3Q9Y572 518 aa19.66■□□□□ 0.74
PACSIN3-206ENST00000530405 GBF1Q92538 1859 aa19.66■□□□□ 0.74
PACSIN3-206ENST00000530405 USP17L12C9JPN9 530 aa19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 USP17L21D6R901 530 aa19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 SMIM22K7EJ46 135 aa19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 ADCY6O43306 1168 aa19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 RAD21O60216 631 aa19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 MBD4O95243 580 aa19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 CD4P01730 458 aa19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 NKX3-2P78367 333 aa19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 CCDC144BQ3MJ40 725 aa19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 HSP90AB4PQ58FF6 505 aa19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 ITPRIPQ8IWB1 547 aa19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 FTSJ3Q8IY81 847 aaKnown RBP19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 DNAJC2Q99543 621 aaKnown RBP19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 TSPYL2Q9H2G4 693 aaPredicted RBP19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 NKX2-4Q9H2Z4 354 aa19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 IL1RAPL2Q9NP60 686 aa19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 CXXC1Q9P0U4 656 aaPredicted RBP19.65■□□□□ 0.74
PACSIN3-206ENST00000530405 CYP2D7A0A087X1C5 515 aa19.64■□□□□ 0.73
PACSIN3-206ENST00000530405 APBB1O00213 710 aa19.64■□□□□ 0.73
PACSIN3-206ENST00000530405 ATP2A1O14983 1001 aa19.64■□□□□ 0.73
PACSIN3-206ENST00000530405 FGBP02675 491 aa19.64■□□□□ 0.73
PACSIN3-206ENST00000530405 CYP2C18P33260 490 aa19.64■□□□□ 0.73
PACSIN3-206ENST00000530405 PRPF38AQ8NAV1 312 aaKnown RBP19.64■□□□□ 0.73
PACSIN3-206ENST00000530405 RHPN1Q8TCX5 695 aa19.64■□□□□ 0.73
PACSIN3-206ENST00000530405 MCM3APO60318 1980 aa19.64■□□□□ 0.73
PACSIN3-206ENST00000530405 TRANK1O15050 2925 aa19.63■□□□□ 0.73
PACSIN3-206ENST00000530405 GREB1LQ9C091 1923 aaPredicted RBP19.63■□□□□ 0.73
PACSIN3-206ENST00000530405 ADD2P35612 726 aa19.63■□□□□ 0.73
PACSIN3-206ENST00000530405 DDRGK1Q96HY6 314 aa19.63■□□□□ 0.73
PACSIN3-206ENST00000530405 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.63■□□□□ 0.73
PACSIN3-206ENST00000530405 C1QTNF1Q9BXJ1 281 aa19.63■□□□□ 0.73
PACSIN3-206ENST00000530405 YBX2Q9Y2T7 364 aaKnown RBP19.63■□□□□ 0.73
PACSIN3-206ENST00000530405 CTAGE5O15320 804 aa19.62■□□□□ 0.73
PACSIN3-206ENST00000530405 BMP1P13497 986 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms