RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 MIR1-1HGQ9H1L0 117 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 ASAP1Q9ULH1 1129 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 COL6A3P12111 3177 aa9.41□□□□□ -0.9
SVIP-204ENST00000530199 F13A1P00488 732 aa9.41□□□□□ -0.9
SVIP-204ENST00000530199 SSBP05455 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
SVIP-204ENST00000530199 ARNTP27540 789 aa9.41□□□□□ -0.9
SVIP-204ENST00000530199 CABP4P57796 275 aa9.41□□□□□ -0.9
SVIP-204ENST00000530199 CST9Q5W186 159 aa9.41□□□□□ -0.9
SVIP-204ENST00000530199 BNC2Q6ZN30 1099 aaPredicted RBP9.41□□□□□ -0.9
SVIP-204ENST00000530199 SLITRK4Q8IW52 837 aa9.41□□□□□ -0.9
SVIP-204ENST00000530199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.41□□□□□ -0.9
SVIP-204ENST00000530199 NUDT8Q8WV74 236 aa9.41□□□□□ -0.9
SVIP-204ENST00000530199 GATAD2BQ8WXI9 593 aa9.41□□□□□ -0.9
SVIP-204ENST00000530199 NKD1Q969G9 470 aa9.41□□□□□ -0.9
SVIP-204ENST00000530199 COL25A1Q9BXS0 654 aaPredicted RBP9.41□□□□□ -0.9
SVIP-204ENST00000530199 TAOK3Q9H2K8 898 aa9.41□□□□□ -0.9
SVIP-204ENST00000530199 GDF2Q9UK05 429 aaPredicted RBP9.41□□□□□ -0.9
SVIP-204ENST00000530199 STRIP2Q9ULQ0 834 aa9.41□□□□□ -0.9
SVIP-204ENST00000530199 STARD13Q9Y3M8 1113 aa9.41□□□□□ -0.9
SVIP-204ENST00000530199 COL5A3P25940 1745 aaPredicted RBP9.41□□□□□ -0.9
SVIP-204ENST00000530199 NRXN2Q9P2S2 1712 aa9.41□□□□□ -0.9
SVIP-204ENST00000530199 H3BRJ5 948 aa9.4□□□□□ -0.9
SVIP-204ENST00000530199 SOX1O00570 391 aaPredicted RBP9.4□□□□□ -0.9
SVIP-204ENST00000530199 NFX1Q12986 1120 aaKnown RBP9.4□□□□□ -0.9
SVIP-204ENST00000530199 LRRC14Q15048 493 aa9.4□□□□□ -0.9
SVIP-204ENST00000530199 GRIK5Q16478 980 aa9.4□□□□□ -0.9
SVIP-204ENST00000530199 CCDC144BQ3MJ40 725 aa9.4□□□□□ -0.9
SVIP-204ENST00000530199 C20orf204Q6ZNR8 217 aa9.4□□□□□ -0.9
SVIP-204ENST00000530199 EMILIN2Q9BXX0 1053 aa9.4□□□□□ -0.9
SVIP-204ENST00000530199 LRRC3Q9BY71 257 aa9.4□□□□□ -0.9
SVIP-204ENST00000530199 ATG3Q9NT62 314 aa9.4□□□□□ -0.9
SVIP-204ENST00000530199 SAGE1Q9NXZ1 904 aa9.4□□□□□ -0.9
SVIP-204ENST00000530199 TMOD3Q9NYL9 352 aa9.4□□□□□ -0.9
SVIP-204ENST00000530199 FAM221AA4D161 298 aa9.39□□□□□ -0.91
SVIP-204ENST00000530199 EPXP11678 715 aa9.39□□□□□ -0.91
SVIP-204ENST00000530199 CIAPIN1Q6FI81 312 aa9.39□□□□□ -0.91
SVIP-204ENST00000530199 LLGL2Q6P1M3 1020 aa9.39□□□□□ -0.91
SVIP-204ENST00000530199 SAPCD2Q86UD0 394 aa9.39□□□□□ -0.91
SVIP-204ENST00000530199 FBXO27Q8NI29 283 aa9.39□□□□□ -0.91
SVIP-204ENST00000530199 GRIN3AQ8TCU5 1115 aa9.39□□□□□ -0.91
SVIP-204ENST00000530199 JARID2Q92833 1246 aaPredicted RBP9.39□□□□□ -0.91
SVIP-204ENST00000530199 ZNF408Q9H9D4 720 aa9.39□□□□□ -0.91
SVIP-204ENST00000530199 CBX8Q9HC52 389 aa9.39□□□□□ -0.91
SVIP-204ENST00000530199 SRP68Q9UHB9 627 aaKnown RBP9.39□□□□□ -0.91
SVIP-204ENST00000530199 TRPM7Q96QT4 1865 aa9.38□□□□□ -0.91
SVIP-204ENST00000530199 H0YIN7 160 aa9.38□□□□□ -0.91
SVIP-204ENST00000530199 SRSF11Q05519 484 aaKnown RBP9.38□□□□□ -0.91
SVIP-204ENST00000530199 ZNF252P-AS1Q0IIN9 211 aa9.38□□□□□ -0.91
SVIP-204ENST00000530199 SEPT6Q14141 434 aa9.38□□□□□ -0.91
SVIP-204ENST00000530199 SEZ6Q53EL9 994 aa9.38□□□□□ -0.91
SVIP-204ENST00000530199 CTU1Q7Z7A3 348 aaKnown RBP9.38□□□□□ -0.91
SVIP-204ENST00000530199 C2CD5Q86YS7 1000 aa9.38□□□□□ -0.91
SVIP-204ENST00000530199 IL22RA1Q8N6P7 574 aa9.38□□□□□ -0.91
SVIP-204ENST00000530199 SOX17Q9H6I2 414 aaPredicted RBP9.38□□□□□ -0.91
SVIP-204ENST00000530199 JPH1Q9HDC5 661 aaPredicted RBP9.38□□□□□ -0.91
SVIP-204ENST00000530199 PPME1Q9Y570 386 aa9.38□□□□□ -0.91
SVIP-204ENST00000530199 RTL1A6NKG5 1358 aa9.37□□□□□ -0.91
SVIP-204ENST00000530199 MYH14Q7Z406 1995 aaKnown RBP9.37□□□□□ -0.91
SVIP-204ENST00000530199 TLR3O15455 904 aaKnown RBP9.37□□□□□ -0.91
SVIP-204ENST00000530199 SMARCA5O60264 1052 aaPredicted RBP9.37□□□□□ -0.91
SVIP-204ENST00000530199 CILPO75339 1184 aa9.37□□□□□ -0.91
SVIP-204ENST00000530199 ALBP02768 609 aa9.37□□□□□ -0.91
SVIP-204ENST00000530199 CDC25BP30305 580 aa9.37□□□□□ -0.91
SVIP-204ENST00000530199 NOGQ13253 232 aa9.37□□□□□ -0.91
SVIP-204ENST00000530199 AP3B2Q13367 1082 aa9.37□□□□□ -0.91
SVIP-204ENST00000530199 MPP2Q14168 576 aa9.37□□□□□ -0.91
SVIP-204ENST00000530199 PKN2Q16513 984 aaKnown RBP9.37□□□□□ -0.91
SVIP-204ENST00000530199 SCARA3Q6AZY7 606 aa9.37□□□□□ -0.91
SVIP-204ENST00000530199 NOP9Q86U38 636 aaKnown RBP9.37□□□□□ -0.91
SVIP-204ENST00000530199 PDZD3Q86UT5 571 aa9.37□□□□□ -0.91
SVIP-204ENST00000530199 FAM177A1Q8N128 213 aaPredicted RBP9.37□□□□□ -0.91
SVIP-204ENST00000530199 GAL3ST3Q96A11 431 aa9.37□□□□□ -0.91
SVIP-204ENST00000530199 AFDNP55196 1824 aaKnown RBP9.37□□□□□ -0.91
SVIP-204ENST00000530199 AMPHP49418 695 aa9.36□□□□□ -0.91
SVIP-204ENST00000530199 AFF1P51825 1210 aaKnown RBP9.36□□□□□ -0.91
SVIP-204ENST00000530199 CWF19L2Q2TBE0 894 aaKnown RBP9.36□□□□□ -0.91
SVIP-204ENST00000530199 HGSNATQ68CP4 663 aa9.36□□□□□ -0.91
SVIP-204ENST00000530199 KANK3Q6NY19 840 aa9.36□□□□□ -0.91
SVIP-204ENST00000530199 GIMAP6Q6P9H5 292 aa9.36□□□□□ -0.91
SVIP-204ENST00000530199 C1orf229Q6ZS94 237 aaPredicted RBP9.36□□□□□ -0.91
SVIP-204ENST00000530199 CKAP2LQ8IYA6 745 aa9.36□□□□□ -0.91
SVIP-204ENST00000530199 USHBP1Q8N6Y0 703 aa9.36□□□□□ -0.91
SVIP-204ENST00000530199 ACDQ96AP0 544 aa9.36□□□□□ -0.91
SVIP-204ENST00000530199 MRVI1Q9Y6F6 885 aa9.36□□□□□ -0.91
SVIP-204ENST00000530199 EDC4Q6P2E9 1401 aaKnown RBP9.36□□□□□ -0.91
SVIP-204ENST00000530199 ERBB4Q15303 1308 aa9.35□□□□□ -0.91
SVIP-204ENST00000530199 RNF123Q5XPI4 1314 aa9.35□□□□□ -0.91
SVIP-204ENST00000530199 ETFBP38117 255 aa9.35□□□□□ -0.91
SVIP-204ENST00000530199 AKAP4Q5JQC9 854 aa9.35□□□□□ -0.91
SVIP-204ENST00000530199 DIEXFQ68CQ4 756 aaKnown RBP9.35□□□□□ -0.91
SVIP-204ENST00000530199 CPLX3Q8WVH0 158 aa9.35□□□□□ -0.91
SVIP-204ENST00000530199 SLC7A3Q8WY07 619 aa9.35□□□□□ -0.91
SVIP-204ENST00000530199 WNT8BQ93098 351 aa9.35□□□□□ -0.91
SVIP-204ENST00000530199 ZNF541Q9H0D2 1346 aa9.34□□□□□ -0.91
SVIP-204ENST00000530199 TERTO14746 1132 aaKnown RBP9.34□□□□□ -0.91
SVIP-204ENST00000530199 EIF4EBP3O60516 100 aaPredicted RBP9.34□□□□□ -0.91
SVIP-204ENST00000530199 LILRB5O75023 590 aa9.34□□□□□ -0.91
SVIP-204ENST00000530199 SERPINB2P05120 415 aa9.34□□□□□ -0.91
SVIP-204ENST00000530199 GSTP1P09211 210 aaKnown RBP9.34□□□□□ -0.91
SVIP-204ENST00000530199 KRT76Q01546 638 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms