RNA–Protein interactions for RNA: ENST00000529640.5

UBXN1-210, Transcript of UBX domain protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBXN1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-210ENST00000529640 TMEM199Q8N511 208 aa20.36■□□□□ 0.85
UBXN1-210ENST00000529640 GLT1D1Q96MS3 346 aa20.36■□□□□ 0.85
UBXN1-210ENST00000529640 ZNF532Q9HCE3 1301 aa20.35■□□□□ 0.85
UBXN1-210ENST00000529640 TCRBV5S4A2TA0A5A2 114 aa20.35■□□□□ 0.85
UBXN1-210ENST00000529640 MYADML2A6NDP7 307 aa20.35■□□□□ 0.85
UBXN1-210ENST00000529640 DUSP11O75319 330 aaKnown RBP20.35■□□□□ 0.85
UBXN1-210ENST00000529640 SNAI1O95863 264 aaPredicted RBP20.35■□□□□ 0.85
UBXN1-210ENST00000529640 CSF2RAP15509 400 aa20.35■□□□□ 0.85
UBXN1-210ENST00000529640 RAB30Q15771 203 aa20.35■□□□□ 0.85
UBXN1-210ENST00000529640 MAMDC4Q6UXC1 1216 aa20.35■□□□□ 0.85
UBXN1-210ENST00000529640 AACSQ86V21 672 aa20.35■□□□□ 0.85
UBXN1-210ENST00000529640 CHD7Q9P2D1 2997 aa20.35■□□□□ 0.85
UBXN1-210ENST00000529640 TCF20Q9UGU0 1960 aaKnown RBP20.34■□□□□ 0.85
UBXN1-210ENST00000529640 GREB1LQ9C091 1923 aaPredicted RBP20.34■□□□□ 0.85
UBXN1-210ENST00000529640 CCER2I3L3R5 266 aa20.34■□□□□ 0.85
UBXN1-210ENST00000529640 ZNF365Q70YC5 407 aa20.34■□□□□ 0.85
UBXN1-210ENST00000529640 PCSK9Q8NBP7 692 aaKnown RBP20.34■□□□□ 0.85
UBXN1-210ENST00000529640 IL27Q8NEV9 243 aa20.34■□□□□ 0.85
UBXN1-210ENST00000529640 FAM122AQ96E09 287 aa20.34■□□□□ 0.85
UBXN1-210ENST00000529640 GOPCQ9HD26 462 aa20.34■□□□□ 0.85
UBXN1-210ENST00000529640 MSRAQ9UJ68 235 aa20.34■□□□□ 0.85
UBXN1-210ENST00000529640 A0A0U1RQG5 324 aaPredicted RBP20.33■□□□□ 0.85
UBXN1-210ENST00000529640 EEF2P13639 858 aaKnown RBP20.33■□□□□ 0.85
UBXN1-210ENST00000529640 ZKSCAN2Q63HK3 967 aa20.33■□□□□ 0.85
UBXN1-210ENST00000529640 ERC1Q8IUD2 1116 aa20.33■□□□□ 0.85
UBXN1-210ENST00000529640 FAM126BQ8IXS8 530 aa20.33■□□□□ 0.85
UBXN1-210ENST00000529640 MIER1Q8N108 512 aa20.33■□□□□ 0.85
UBXN1-210ENST00000529640 UPF3AQ9H1J1 476 aaKnown RBP20.33■□□□□ 0.85
UBXN1-210ENST00000529640 ZHX1Q9UKY1 873 aaPredicted RBP20.33■□□□□ 0.85
UBXN1-210ENST00000529640 DNAJC25-GNG10A0A024R161 153 aa20.32■□□□□ 0.84
UBXN1-210ENST00000529640 ARVCFO00192 962 aa20.32■□□□□ 0.84
UBXN1-210ENST00000529640 ASGR1P07306 291 aa20.32■□□□□ 0.84
UBXN1-210ENST00000529640 C6orf222P0C671 652 aaPredicted RBP20.32■□□□□ 0.84
UBXN1-210ENST00000529640 ACRP10323 421 aa20.32■□□□□ 0.84
UBXN1-210ENST00000529640 IGFBP4P22692 258 aa20.32■□□□□ 0.84
UBXN1-210ENST00000529640 CDK8P49336 464 aa20.32■□□□□ 0.84
UBXN1-210ENST00000529640 CCDC85BQ15834 202 aaPredicted RBP20.32■□□□□ 0.84
UBXN1-210ENST00000529640 FAM83BQ5T0W9 1011 aa20.32■□□□□ 0.84
UBXN1-210ENST00000529640 ZNF467Q7Z7K2 595 aaPredicted RBP20.32■□□□□ 0.84
UBXN1-210ENST00000529640 HERVK_113Q902F9 699 aa20.32■□□□□ 0.84
UBXN1-210ENST00000529640 TEX13BQ9BXU2 312 aa20.32■□□□□ 0.84
UBXN1-210ENST00000529640 KANSL2Q9H9L4 492 aa20.32■□□□□ 0.84
UBXN1-210ENST00000529640 ATP8A2Q9NTI2 1148 aa20.32■□□□□ 0.84
UBXN1-210ENST00000529640 MYH7P12883 1935 aa20.31■□□□□ 0.84
UBXN1-210ENST00000529640 C12orf60Q5U649 245 aa20.31■□□□□ 0.84
UBXN1-210ENST00000529640 C16orf86Q6ZW13 317 aa20.31■□□□□ 0.84
UBXN1-210ENST00000529640 PPP1R12CQ9BZL4 782 aa20.31■□□□□ 0.84
UBXN1-210ENST00000529640 MTIF3Q9H2K0 278 aaKnown RBP20.31■□□□□ 0.84
UBXN1-210ENST00000529640 ARMT1Q9H993 441 aa20.31■□□□□ 0.84
UBXN1-210ENST00000529640 SPC25Q9HBM1 224 aa20.31■□□□□ 0.84
UBXN1-210ENST00000529640 IL23AQ9NPF7 189 aa20.31■□□□□ 0.84
UBXN1-210ENST00000529640 APBB1O00213 710 aa20.3■□□□□ 0.84
UBXN1-210ENST00000529640 TLR3O15455 904 aaKnown RBP20.3■□□□□ 0.84
UBXN1-210ENST00000529640 ADCY6O43306 1168 aa20.3■□□□□ 0.84
UBXN1-210ENST00000529640 GJA9P57773 515 aa20.3■□□□□ 0.84
UBXN1-210ENST00000529640 IRX5P78411 483 aaPredicted RBP20.3■□□□□ 0.84
UBXN1-210ENST00000529640 ACVR2BQ13705 512 aa20.3■□□□□ 0.84
UBXN1-210ENST00000529640 SNRNP48Q6IEG0 339 aaKnown RBP20.3■□□□□ 0.84
UBXN1-210ENST00000529640 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.3■□□□□ 0.84
UBXN1-210ENST00000529640 VTI1AQ96AJ9 217 aa20.3■□□□□ 0.84
UBXN1-210ENST00000529640 DDX11Q96FC9 970 aa20.3■□□□□ 0.84
UBXN1-210ENST00000529640 NKX2-4Q9H2Z4 354 aa20.3■□□□□ 0.84
UBXN1-210ENST00000529640 CXXC1Q9P0U4 656 aaPredicted RBP20.3■□□□□ 0.84
UBXN1-210ENST00000529640 EXOC6BQ9Y2D4 811 aa20.3■□□□□ 0.84
UBXN1-210ENST00000529640 REV3LO60673 3130 aa20.29■□□□□ 0.84
UBXN1-210ENST00000529640 SMIM22K7EJ46 135 aa20.29■□□□□ 0.84
UBXN1-210ENST00000529640 GOLIM4O00461 696 aa20.29■□□□□ 0.84
UBXN1-210ENST00000529640 PRKAB2O43741 272 aa20.29■□□□□ 0.84
UBXN1-210ENST00000529640 CD4P01730 458 aa20.29■□□□□ 0.84
UBXN1-210ENST00000529640 CEP85Q6P2H3 762 aa20.29■□□□□ 0.84
UBXN1-210ENST00000529640 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.29■□□□□ 0.84
UBXN1-210ENST00000529640 AMOTL1Q8IY63 956 aa20.29■□□□□ 0.84
UBXN1-210ENST00000529640 SLF1Q9BQI6 1058 aa20.29■□□□□ 0.84
UBXN1-210ENST00000529640 TSPYL2Q9H2G4 693 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-210ENST00000529640 ABHD16BQ9H3Z7 469 aa20.29■□□□□ 0.84
UBXN1-210ENST00000529640 SLC28A3Q9HAS3 691 aa20.29■□□□□ 0.84
UBXN1-210ENST00000529640 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-210ENST00000529640 YBX2Q9Y2T7 364 aaKnown RBP20.29■□□□□ 0.84
UBXN1-210ENST00000529640 CYP2D7A0A087X1C5 515 aa20.28■□□□□ 0.84
UBXN1-210ENST00000529640 ATP2A1O14983 1001 aa20.28■□□□□ 0.84
UBXN1-210ENST00000529640 MBD4O95243 580 aa20.28■□□□□ 0.84
UBXN1-210ENST00000529640 CYP2C18P33260 490 aa20.28■□□□□ 0.84
UBXN1-210ENST00000529640 CCDC144BQ3MJ40 725 aa20.28■□□□□ 0.84
UBXN1-210ENST00000529640 GNASQ5JWF2 1037 aa20.28■□□□□ 0.84
UBXN1-210ENST00000529640 DNAJC2Q99543 621 aaKnown RBP20.28■□□□□ 0.84
UBXN1-210ENST00000529640 C1QTNF1Q9BXJ1 281 aa20.28■□□□□ 0.84
UBXN1-210ENST00000529640 RIPK3Q9Y572 518 aa20.28■□□□□ 0.84
UBXN1-210ENST00000529640 MYH4Q9Y623 1939 aa20.27■□□□□ 0.84
UBXN1-210ENST00000529640 USP17L12C9JPN9 530 aa20.27■□□□□ 0.84
UBXN1-210ENST00000529640 USP17L21D6R901 530 aa20.27■□□□□ 0.84
UBXN1-210ENST00000529640 RAD21O60216 631 aa20.27■□□□□ 0.84
UBXN1-210ENST00000529640 NKX3-2P78367 333 aa20.27■□□□□ 0.84
UBXN1-210ENST00000529640 ITPRIPQ8IWB1 547 aa20.27■□□□□ 0.84
UBXN1-210ENST00000529640 FGD4Q96M96 766 aa20.27■□□□□ 0.84
UBXN1-210ENST00000529640 IL1RAPL2Q9NP60 686 aa20.27■□□□□ 0.84
UBXN1-210ENST00000529640 TRANK1O15050 2925 aa20.26■□□□□ 0.83
UBXN1-210ENST00000529640 CTAGE5O15320 804 aa20.26■□□□□ 0.83
UBXN1-210ENST00000529640 FGBP02675 491 aa20.26■□□□□ 0.83
UBXN1-210ENST00000529640 BMP1P13497 986 aa20.26■□□□□ 0.83
UBXN1-210ENST00000529640 HOXD11P31277 338 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms