RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 TNKSO95271 1327 aa18.96■□□□□ 0.63
TSPAN4-218ENST00000529566 CYP2B6P20813 491 aa18.95■□□□□ 0.62
TSPAN4-218ENST00000529566 STAT2P52630 851 aa18.95■□□□□ 0.62
TSPAN4-218ENST00000529566 SOX10P56693 466 aa18.95■□□□□ 0.62
TSPAN4-218ENST00000529566 COL9A3Q14050 684 aaPredicted RBP18.95■□□□□ 0.62
TSPAN4-218ENST00000529566 TTBK2Q6IQ55 1244 aa18.95■□□□□ 0.62
TSPAN4-218ENST00000529566 FAM160B2Q86V87 743 aa18.95■□□□□ 0.62
TSPAN4-218ENST00000529566 MB21D2Q8IYB1 491 aaPredicted RBP18.95■□□□□ 0.62
TSPAN4-218ENST00000529566 MROH8Q9H579 483 aa18.95■□□□□ 0.62
TSPAN4-218ENST00000529566 MTMR7Q9Y216 660 aa18.95■□□□□ 0.62
TSPAN4-218ENST00000529566 STRNO43815 780 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 ZBED4O75132 1171 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 SLC25A27O95847 323 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 HOXC6P09630 235 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 RGS19P49795 217 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 ANTXR2P58335 489 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 ZNF543Q08ER8 600 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 TRDNQ13061 729 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 MAP2K5Q13163 448 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 MTFR1Q15390 333 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 WDR78Q5VTH9 848 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 NCAPG2Q86XI2 1143 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 NCOA7Q8NI08 942 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 UBAC1Q9BSL1 405 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 TEX13BQ9BXU2 312 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 RIPK3Q9Y572 518 aa18.94■□□□□ 0.62
TSPAN4-218ENST00000529566 KIAA0100Q14667 2235 aaKnown RBP18.93■□□□□ 0.62
TSPAN4-218ENST00000529566 IGHA2P01877 340 aa18.93■□□□□ 0.62
TSPAN4-218ENST00000529566 FDX1P10109 184 aa18.93■□□□□ 0.62
TSPAN4-218ENST00000529566 RGS2P41220 211 aa18.93■□□□□ 0.62
TSPAN4-218ENST00000529566 OAZ1P54368 228 aa18.93■□□□□ 0.62
TSPAN4-218ENST00000529566 ABRAQ8N0Z2 381 aa18.93■□□□□ 0.62
TSPAN4-218ENST00000529566 PNMA1Q8ND90 353 aa18.93■□□□□ 0.62
TSPAN4-218ENST00000529566 TRIB2Q92519 343 aa18.93■□□□□ 0.62
TSPAN4-218ENST00000529566 RAVER2Q9HCJ3 691 aaKnown RBP18.93■□□□□ 0.62
TSPAN4-218ENST00000529566 PRR12Q9ULL5 1215 aa18.93■□□□□ 0.62
TSPAN4-218ENST00000529566 ZNF536O15090 1300 aa18.93■□□□□ 0.62
TSPAN4-218ENST00000529566 POTEFA5A3E0 1075 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 COBLO75128 1261 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 INHAP05111 366 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 ADORA2AP29274 412 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 SLC16A2P36021 539 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 TRIM32Q13049 653 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 CCL14Q16627 93 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 CCDC96Q2M329 555 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 SNRNP48Q6IEG0 339 aaKnown RBP18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 CHST3Q7LGC8 479 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 IGDCC4Q8TDY8 1250 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 APBA2Q99767 749 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 KAT14Q9H8E8 782 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 SENP2Q9HC62 589 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 GPCPD1Q9NPB8 672 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 IVNS1ABPQ9Y6Y0 642 aa18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 FRMPD2Q68DX3 1309 aaPredicted RBP18.92■□□□□ 0.62
TSPAN4-218ENST00000529566 MYCP01106 439 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-218ENST00000529566 COPB2P35606 906 aa18.91■□□□□ 0.62
TSPAN4-218ENST00000529566 SNAP25P60880 206 aa18.91■□□□□ 0.62
TSPAN4-218ENST00000529566 TSGA10IPQ3SY00 556 aa18.91■□□□□ 0.62
TSPAN4-218ENST00000529566 IFIT1BQ5T764 474 aaKnown RBP18.91■□□□□ 0.62
TSPAN4-218ENST00000529566 RALYLQ86SE5 291 aaKnown RBP18.91■□□□□ 0.62
TSPAN4-218ENST00000529566 RASEFQ8IZ41 740 aa18.91■□□□□ 0.62
TSPAN4-218ENST00000529566 CPXCR1Q8N123 301 aa18.91■□□□□ 0.62
TSPAN4-218ENST00000529566 NPLOC4Q8TAT6 608 aa18.91■□□□□ 0.62
TSPAN4-218ENST00000529566 CWC22Q9HCG8 908 aaKnown RBP18.91■□□□□ 0.62
TSPAN4-218ENST00000529566 FLRT1Q9NZU1 646 aa18.91■□□□□ 0.62
TSPAN4-218ENST00000529566 BIN2Q9UBW5 565 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-218ENST00000529566 ISY1Q9ULR0 285 aaKnown RBP18.91■□□□□ 0.62
TSPAN4-218ENST00000529566 IFIT3O14879 490 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-218ENST00000529566 HMGCRP04035 888 aa18.9■□□□□ 0.62
TSPAN4-218ENST00000529566 FCER1AP12319 257 aa18.9■□□□□ 0.62
TSPAN4-218ENST00000529566 CCL5P13501 91 aa18.9■□□□□ 0.62
TSPAN4-218ENST00000529566 UBXN2AP68543 259 aa18.9■□□□□ 0.62
TSPAN4-218ENST00000529566 IKQ13123 557 aaPredicted RBP18.9■□□□□ 0.62
TSPAN4-218ENST00000529566 MAP3K21Q5TCX8 1036 aa18.9■□□□□ 0.62
TSPAN4-218ENST00000529566 SYDE2Q5VT97 1194 aa18.9■□□□□ 0.62
TSPAN4-218ENST00000529566 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.9■□□□□ 0.62
TSPAN4-218ENST00000529566 TRMT44Q8IYL2 757 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-218ENST00000529566 KCNB2Q92953 911 aa18.9■□□□□ 0.62
TSPAN4-218ENST00000529566 AGBL1Q96MI9 1066 aa18.9■□□□□ 0.62
TSPAN4-218ENST00000529566 UNC93B1Q9H1C4 597 aa18.9■□□□□ 0.62
TSPAN4-218ENST00000529566 RANBP17Q9H2T7 1088 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-218ENST00000529566 ZNF236Q9UL36 1845 aa18.89■□□□□ 0.61
TSPAN4-218ENST00000529566 GOLGA8HP0CJ92 632 aa18.89■□□□□ 0.61
TSPAN4-218ENST00000529566 GPATCH4Q5T3I0 446 aaKnown RBP18.89■□□□□ 0.61
TSPAN4-218ENST00000529566 RNF20Q5VTR2 975 aa18.88■□□□□ 0.61
TSPAN4-218ENST00000529566 MMP19Q99542 508 aa18.88■□□□□ 0.61
TSPAN4-218ENST00000529566 MTA3Q9BTC8 594 aa18.88■□□□□ 0.61
TSPAN4-218ENST00000529566 TMEM106CQ9BVX2 250 aa18.88■□□□□ 0.61
TSPAN4-218ENST00000529566 PAK6Q9NQU5 681 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-218ENST00000529566 GPHNQ9NQX3 736 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-218ENST00000529566 CTDP1Q9Y5B0 961 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-218ENST00000529566 RBBP6Q7Z6E9 1792 aaKnown RBP18.88■□□□□ 0.61
TSPAN4-218ENST00000529566 PRC1O43663 620 aa18.87■□□□□ 0.61
TSPAN4-218ENST00000529566 GJB1P08034 283 aa18.87■□□□□ 0.61
TSPAN4-218ENST00000529566 ZKSCAN1P17029 563 aaPredicted RBP18.87■□□□□ 0.61
TSPAN4-218ENST00000529566 EN2P19622 333 aaPredicted RBP18.87■□□□□ 0.61
TSPAN4-218ENST00000529566 MCM5P33992 734 aa18.87■□□□□ 0.61
TSPAN4-218ENST00000529566 TMEM67Q5HYA8 995 aa18.87■□□□□ 0.61
TSPAN4-218ENST00000529566 CCDC174Q6PII3 467 aa18.87■□□□□ 0.61
TSPAN4-218ENST00000529566 DPP9Q86TI2 863 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms