RNA–Protein interactions for RNA: ENST00000528953.1

AP002008.2-203, humanhuman

TSL 1 (best)

Gene AP002008.2, Length 707 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.2-203ENST00000528953 BMP3P12645 472 aa20.82■□□□□ 0.92
AP002008.2-203ENST00000528953 ATN1P54259 1190 aaPredicted RBP20.82■□□□□ 0.92
AP002008.2-203ENST00000528953 PPP4R3BQ5MIZ7 849 aa20.82■□□□□ 0.92
AP002008.2-203ENST00000528953 CPXCR1Q8N123 301 aa20.82■□□□□ 0.92
AP002008.2-203ENST00000528953 SLC38A10Q9HBR0 1119 aa20.82■□□□□ 0.92
AP002008.2-203ENST00000528953 HELLSQ9NRZ9 838 aa20.82■□□□□ 0.92
AP002008.2-203ENST00000528953 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.82■□□□□ 0.92
AP002008.2-203ENST00000528953 COL11A1P12107 1806 aaPredicted RBP20.82■□□□□ 0.92
AP002008.2-203ENST00000528953 FRMPD3Q5JV73 1810 aa20.82■□□□□ 0.92
AP002008.2-203ENST00000528953 LAMA3Q16787 3333 aa20.81■□□□□ 0.92
AP002008.2-203ENST00000528953 CTDSPL2Q05D32 466 aa20.81■□□□□ 0.92
AP002008.2-203ENST00000528953 VPS53Q5VIR6 699 aa20.81■□□□□ 0.92
AP002008.2-203ENST00000528953 TICAM2Q86XR7 235 aa20.81■□□□□ 0.92
AP002008.2-203ENST00000528953 LNPKQ9C0E8 428 aa20.81■□□□□ 0.92
AP002008.2-203ENST00000528953 RIPK3Q9Y572 518 aa20.81■□□□□ 0.92
AP002008.2-203ENST00000528953 TSPY2A6NKD2 308 aa20.8■□□□□ 0.92
AP002008.2-203ENST00000528953 MYCNP04198 464 aaPredicted RBP20.8■□□□□ 0.92
AP002008.2-203ENST00000528953 SLC4A3P48751 1232 aa20.8■□□□□ 0.92
AP002008.2-203ENST00000528953 OAZ1P54368 228 aa20.8■□□□□ 0.92
AP002008.2-203ENST00000528953 MSL3Q8N5Y2 521 aaKnown RBP20.8■□□□□ 0.92
AP002008.2-203ENST00000528953 DDX11Q96FC9 970 aa20.8■□□□□ 0.92
AP002008.2-203ENST00000528953 RWDD1Q9H446 243 aaPredicted RBP20.8■□□□□ 0.92
AP002008.2-203ENST00000528953 RAVER2Q9HCJ3 691 aaKnown RBP20.8■□□□□ 0.92
AP002008.2-203ENST00000528953 ANAPC4Q9UJX5 808 aa20.8■□□□□ 0.92
AP002008.2-203ENST00000528953 ISY1Q9ULR0 285 aaKnown RBP20.8■□□□□ 0.92
AP002008.2-203ENST00000528953 TMEM232C9JQI7 657 aa20.79■□□□□ 0.92
AP002008.2-203ENST00000528953 SOX1O00570 391 aaPredicted RBP20.79■□□□□ 0.92
AP002008.2-203ENST00000528953 RARBP10826 455 aa20.79■□□□□ 0.92
AP002008.2-203ENST00000528953 LRRC41Q15345 812 aa20.79■□□□□ 0.92
AP002008.2-203ENST00000528953 ALX1Q15699 326 aa20.79■□□□□ 0.92
AP002008.2-203ENST00000528953 SMC5Q8IY18 1101 aa20.79■□□□□ 0.92
AP002008.2-203ENST00000528953 GMCL1Q96IK5 515 aa20.79■□□□□ 0.92
AP002008.2-203ENST00000528953 FAM227BQ96M60 508 aa20.79■□□□□ 0.92
AP002008.2-203ENST00000528953 UBE2OQ9C0C9 1292 aaKnown RBP20.79■□□□□ 0.92
AP002008.2-203ENST00000528953 INCENPQ9NQS7 918 aa20.79■□□□□ 0.92
AP002008.2-203ENST00000528953 FBXO40Q9UH90 709 aa20.79■□□□□ 0.92
AP002008.2-203ENST00000528953 STX8Q9UNK0 236 aa20.79■□□□□ 0.92
AP002008.2-203ENST00000528953 CNPY2Q9Y2B0 182 aa20.79■□□□□ 0.92
AP002008.2-203ENST00000528953 DNAJC25-GNG10A0A024R161 153 aa20.78■□□□□ 0.92
AP002008.2-203ENST00000528953 A0A0D9SFI3 127 aa20.78■□□□□ 0.92
AP002008.2-203ENST00000528953 FDX1P10109 184 aa20.78■□□□□ 0.92
AP002008.2-203ENST00000528953 TAL1P17542 331 aaPredicted RBP20.78■□□□□ 0.92
AP002008.2-203ENST00000528953 SLC1A4P43007 532 aa20.78■□□□□ 0.92
AP002008.2-203ENST00000528953 STAT2P52630 851 aa20.78■□□□□ 0.92
AP002008.2-203ENST00000528953 RTP1P59025 263 aa20.78■□□□□ 0.92
AP002008.2-203ENST00000528953 MCMDC2Q4G0Z9 681 aa20.78■□□□□ 0.92
AP002008.2-203ENST00000528953 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.78■□□□□ 0.92
AP002008.2-203ENST00000528953 TDHQ8IZJ6 230 aa20.78■□□□□ 0.92
AP002008.2-203ENST00000528953 CHST13Q8NET6 341 aa20.78■□□□□ 0.92
AP002008.2-203ENST00000528953 XPNPEP3Q9NQH7 507 aa20.78■□□□□ 0.92
AP002008.2-203ENST00000528953 MYH4Q9Y623 1939 aa20.77■□□□□ 0.92
AP002008.2-203ENST00000528953 ORC4O43929 436 aa20.77■□□□□ 0.92
AP002008.2-203ENST00000528953 RANBP6O60518 1105 aaKnown RBP20.77■□□□□ 0.92
AP002008.2-203ENST00000528953 ZNF865P0CJ78 1059 aaPredicted RBP20.77■□□□□ 0.92
AP002008.2-203ENST00000528953 B4GALNT3Q6L9W6 998 aa20.77■□□□□ 0.92
AP002008.2-203ENST00000528953 SLC39A5Q6ZMH5 540 aa20.77■□□□□ 0.92
AP002008.2-203ENST00000528953 FAM160B2Q86V87 743 aa20.77■□□□□ 0.92
AP002008.2-203ENST00000528953 CHURC1Q8WUH1 139 aa20.77■□□□□ 0.92
AP002008.2-203ENST00000528953 LRCH3Q96II8 777 aa20.77■□□□□ 0.92
AP002008.2-203ENST00000528953 IL17RBQ9NRM6 502 aa20.77■□□□□ 0.92
AP002008.2-203ENST00000528953 SYNGAP1Q96PV0 1343 aa20.77■□□□□ 0.91
AP002008.2-203ENST00000528953 TRIM6-TRIM34B2RNG4 842 aa20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 NMT2O60551 498 aa20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 FGAP02671 866 aa20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 FGRP09769 529 aa20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 AKR1A1P14550 325 aa20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 MCCP23508 829 aa20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 ADCYAP1R1P41586 468 aa20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 MDM2Q00987 491 aaPredicted RBP20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 IKQ13123 557 aaPredicted RBP20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 MAMDC4Q6UXC1 1216 aa20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 ZNF467Q7Z7K2 595 aaPredicted RBP20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 ANKRD35Q8N283 1001 aa20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 STAG1Q8WVM7 1258 aa20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 PRKAG2Q9UGJ0 569 aa20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 ATP11BQ9Y2G3 1177 aa20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 TACC3Q9Y6A5 838 aa20.76■□□□□ 0.91
AP002008.2-203ENST00000528953 ZNFX1Q9P2E3 1918 aaKnown RBP20.75■□□□□ 0.91
AP002008.2-203ENST00000528953 NMIQ13287 307 aaPredicted RBP20.75■□□□□ 0.91
AP002008.2-203ENST00000528953 SNX17Q15036 470 aa20.75■□□□□ 0.91
AP002008.2-203ENST00000528953 LRIT3Q3SXY7 679 aa20.75■□□□□ 0.91
AP002008.2-203ENST00000528953 RNF180Q86T96 592 aa20.75■□□□□ 0.91
AP002008.2-203ENST00000528953 ZNF589Q86UQ0 364 aaPredicted RBP20.75■□□□□ 0.91
AP002008.2-203ENST00000528953 CHD1LQ86WJ1 897 aa20.75■□□□□ 0.91
AP002008.2-203ENST00000528953 CHMP4CQ96CF2 233 aa20.75■□□□□ 0.91
AP002008.2-203ENST00000528953 LBHD1Q9BQE6 289 aaPredicted RBP20.75■□□□□ 0.91
AP002008.2-203ENST00000528953 ZMYM6O95789 1325 aa20.75■□□□□ 0.91
AP002008.2-203ENST00000528953 PLA2G6O60733 806 aa20.74■□□□□ 0.91
AP002008.2-203ENST00000528953 SNAI1O95863 264 aaPredicted RBP20.74■□□□□ 0.91
AP002008.2-203ENST00000528953 PGK1P00558 417 aa20.74■□□□□ 0.91
AP002008.2-203ENST00000528953 HSPD1P10809 573 aaKnown RBP20.74■□□□□ 0.91
AP002008.2-203ENST00000528953 C1orf53Q5VUE5 145 aa20.74■□□□□ 0.91
AP002008.2-203ENST00000528953 RILPL2Q969X0 211 aa20.74■□□□□ 0.91
AP002008.2-203ENST00000528953 FERMT2Q96AC1 680 aa20.74■□□□□ 0.91
AP002008.2-203ENST00000528953 ACAD9Q9H845 621 aa20.74■□□□□ 0.91
AP002008.2-203ENST00000528953 TOMM22Q9NS69 142 aa20.74■□□□□ 0.91
AP002008.2-203ENST00000528953 HOMER2Q9NSB8 354 aa20.74■□□□□ 0.91
AP002008.2-203ENST00000528953 PHF24Q9UPV7 400 aa20.74■□□□□ 0.91
AP002008.2-203ENST00000528953 CCDC171Q6TFL3 1326 aa20.74■□□□□ 0.91
AP002008.2-203ENST00000528953 IGHDP01880 384 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms