RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
SRPRA-203ENST00000528744 DNAJC25-GNG10A0A024R161 153 aa13.77□□□□□ -0.21
SRPRA-203ENST00000528744 ERC2O15083 957 aa13.77□□□□□ -0.21
SRPRA-203ENST00000528744 MSCO60682 206 aa13.77□□□□□ -0.21
SRPRA-203ENST00000528744 IGHDP01880 384 aa13.77□□□□□ -0.21
SRPRA-203ENST00000528744 ADCYAP1R1P41586 468 aa13.77□□□□□ -0.21
SRPRA-203ENST00000528744 SLC4A3P48751 1232 aa13.77□□□□□ -0.21
SRPRA-203ENST00000528744 PDE1AP54750 535 aa13.77□□□□□ -0.21
SRPRA-203ENST00000528744 RTP1P59025 263 aa13.77□□□□□ -0.21
SRPRA-203ENST00000528744 SH3RF1Q7Z6J0 888 aa13.77□□□□□ -0.21
SRPRA-203ENST00000528744 PRPF38AQ8NAV1 312 aaKnown RBP13.77□□□□□ -0.21
SRPRA-203ENST00000528744 KIFC2Q96AC6 838 aa13.77□□□□□ -0.21
SRPRA-203ENST00000528744 FAM227BQ96M60 508 aa13.77□□□□□ -0.21
SRPRA-203ENST00000528744 LAMA2P24043 3122 aaKnown RBP13.77□□□□□ -0.21
SRPRA-203ENST00000528744 A0A0G2JMZ2 1700 aa13.76□□□□□ -0.21
SRPRA-203ENST00000528744 PGK1P00558 417 aa13.76□□□□□ -0.21
SRPRA-203ENST00000528744 SNAP25P60880 206 aa13.76□□□□□ -0.21
SRPRA-203ENST00000528744 HDAC1Q13547 482 aaPredicted RBP13.76□□□□□ -0.21
SRPRA-203ENST00000528744 SLFN13Q68D06 897 aa13.76□□□□□ -0.21
SRPRA-203ENST00000528744 SNRNP48Q6IEG0 339 aaKnown RBP13.76□□□□□ -0.21
SRPRA-203ENST00000528744 Q7L0L9 218 aa13.76□□□□□ -0.21
SRPRA-203ENST00000528744 UBE2OQ9C0C9 1292 aaKnown RBP13.76□□□□□ -0.21
SRPRA-203ENST00000528744 NAPBQ9H115 298 aa13.76□□□□□ -0.21
SRPRA-203ENST00000528744 SLC38A10Q9HBR0 1119 aa13.76□□□□□ -0.21
SRPRA-203ENST00000528744 DIS3Q9Y2L1 958 aaKnown RBP13.76□□□□□ -0.21
SRPRA-203ENST00000528744 DDX49Q9Y6V7 483 aaKnown RBP13.76□□□□□ -0.21
SRPRA-203ENST00000528744 ZNF536O15090 1300 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 GREB1LQ9C091 1923 aaPredicted RBP13.75□□□□□ -0.21
SRPRA-203ENST00000528744 A0A0D9SFI3 127 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 TRIM43BA6NCK2 446 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 ATP2A1O14983 1001 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 ADCY6O43306 1168 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 TTLL1O95922 423 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 MCCP23508 829 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 ITGB8P26012 769 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 KCTD2Q14681 263 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 LRIT3Q3SXY7 679 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 TDHQ8IZJ6 230 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 ARRDC4Q8NCT1 418 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 GMCL1P1Q8NEA9 526 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 TRIM43Q96BQ3 446 aaPredicted RBP13.75□□□□□ -0.21
SRPRA-203ENST00000528744 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
SRPRA-203ENST00000528744 TEX13BQ9BXU2 312 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 SLC5A4Q9NY91 659 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 ATP11BQ9Y2G3 1177 aa13.75□□□□□ -0.21
SRPRA-203ENST00000528744 SMCHD1A6NHR9 2005 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 MYADML2A6NDP7 307 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 TMEM232C9JQI7 657 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 ZBED4O75132 1171 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 FGAP02671 866 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 FGRP09769 529 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 TSPY3P0CV98 308 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 TSPY8P0CW00 308 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 BMP3P12645 472 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 NOVP48745 357 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 SNX17Q15036 470 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 TRIM60Q495X7 471 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 ZNF589Q86UQ0 364 aaPredicted RBP13.74□□□□□ -0.21
SRPRA-203ENST00000528744 EVI5LQ96CN4 794 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 AGBL1Q96MI9 1066 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 NACAP1Q9BZK3 213 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 LNPKQ9C0E8 428 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 FEM1BQ9UK73 627 aa13.74□□□□□ -0.21
SRPRA-203ENST00000528744 ADAMTS4O75173 837 aa13.73□□□□□ -0.21
SRPRA-203ENST00000528744 PTGS1P23219 599 aa13.73□□□□□ -0.21
SRPRA-203ENST00000528744 CNTN2Q02246 1040 aa13.73□□□□□ -0.21
SRPRA-203ENST00000528744 PDE4BQ07343 736 aa13.73□□□□□ -0.21
SRPRA-203ENST00000528744 ALX1Q15699 326 aa13.73□□□□□ -0.21
SRPRA-203ENST00000528744 CCSAPQ6IQ19 270 aaPredicted RBP13.73□□□□□ -0.21
SRPRA-203ENST00000528744 TTBK2Q6IQ55 1244 aa13.73□□□□□ -0.21
SRPRA-203ENST00000528744 B4GALNT3Q6L9W6 998 aa13.73□□□□□ -0.21
SRPRA-203ENST00000528744 MAMDC4Q6UXC1 1216 aa13.73□□□□□ -0.21
SRPRA-203ENST00000528744 KCTD1Q719H9 257 aa13.73□□□□□ -0.21
SRPRA-203ENST00000528744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.73□□□□□ -0.21
SRPRA-203ENST00000528744 PURBQ96QR8 312 aaKnown RBP13.73□□□□□ -0.21
SRPRA-203ENST00000528744 KATNBL1Q9H079 304 aa13.73□□□□□ -0.21
SRPRA-203ENST00000528744 NRBP1Q9UHY1 535 aa13.73□□□□□ -0.21
SRPRA-203ENST00000528744 ANAPC4Q9UJX5 808 aa13.73□□□□□ -0.21
SRPRA-203ENST00000528744 MYH7P12883 1935 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 PLIN4Q96Q06 1357 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 A0A0C4DFX4 3053 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 SOWAHBA6NEL2 793 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 TLE2Q04725 743 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 NMIQ13287 307 aaPredicted RBP13.72□□□□□ -0.21
SRPRA-203ENST00000528744 LRRFIP1Q32MZ4 808 aaKnown RBP13.72□□□□□ -0.21
SRPRA-203ENST00000528744 C9orf50Q5SZB4 431 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 TMEM63BQ5T3F8 832 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 SMC5Q8IY18 1101 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 KLHDC9Q8NEP7 349 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 EXOC6Q8TAG9 804 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 STAG1Q8WVM7 1258 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 DDX11Q96FC9 970 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 XPNPEP3Q9NQH7 507 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 HELLSQ9NRZ9 838 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 PHF24Q9UPV7 400 aa13.72□□□□□ -0.21
SRPRA-203ENST00000528744 PARP14Q460N5 1801 aa13.71□□□□□ -0.21
SRPRA-203ENST00000528744 ZNF236Q9UL36 1845 aa13.71□□□□□ -0.21
SRPRA-203ENST00000528744 ASTN1O14525 1302 aa13.71□□□□□ -0.21
SRPRA-203ENST00000528744 KBTBD13C9JR72 458 aa13.71□□□□□ -0.21
SRPRA-203ENST00000528744 HSPD1P10809 573 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms