RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 PDE4BQ07343 736 aa30.79■■■□□ 2.52
TRIM3-206ENST00000528227 PPARAQ07869 468 aa30.79■■■□□ 2.52
TRIM3-206ENST00000528227 SNX17Q15036 470 aa30.79■■■□□ 2.52
TRIM3-206ENST00000528227 LRRC47Q8N1G4 583 aaKnown RBP30.79■■■□□ 2.52
TRIM3-206ENST00000528227 NEDD1Q8NHV4 660 aa30.79■■■□□ 2.52
TRIM3-206ENST00000528227 LBHD1Q9BQE6 289 aaPredicted RBP30.79■■■□□ 2.52
TRIM3-206ENST00000528227 PRKAG2Q9UGJ0 569 aa30.79■■■□□ 2.52
TRIM3-206ENST00000528227 SMCHD1A6NHR9 2005 aa30.78■■■□□ 2.52
TRIM3-206ENST00000528227 ZNF865P0CJ78 1059 aaPredicted RBP30.78■■■□□ 2.52
TRIM3-206ENST00000528227 TSPY3P0CV98 308 aa30.78■■■□□ 2.52
TRIM3-206ENST00000528227 TSPY8P0CW00 308 aa30.78■■■□□ 2.52
TRIM3-206ENST00000528227 RARBP10826 455 aa30.78■■■□□ 2.52
TRIM3-206ENST00000528227 ADCYAP1R1P41586 468 aa30.78■■■□□ 2.52
TRIM3-206ENST00000528227 XPNPEP3Q9NQH7 507 aa30.78■■■□□ 2.52
TRIM3-206ENST00000528227 FEM1BQ9UK73 627 aa30.78■■■□□ 2.52
TRIM3-206ENST00000528227 ZBED4O75132 1171 aa30.77■■■□□ 2.52
TRIM3-206ENST00000528227 SLC3A2P08195 630 aaKnown RBP30.77■■■□□ 2.52
TRIM3-206ENST00000528227 CPXCR1Q8N123 301 aa30.77■■■□□ 2.52
TRIM3-206ENST00000528227 KIFC2Q96AC6 838 aa30.77■■■□□ 2.52
TRIM3-206ENST00000528227 SLC38A10Q9HBR0 1119 aa30.77■■■□□ 2.52
TRIM3-206ENST00000528227 DNAJC25-GNG10A0A024R161 153 aa30.76■■■□□ 2.51
TRIM3-206ENST00000528227 TRIM60Q495X7 471 aa30.76■■■□□ 2.51
TRIM3-206ENST00000528227 MSL3Q8N5Y2 521 aaKnown RBP30.76■■■□□ 2.51
TRIM3-206ENST00000528227 FERMT2Q96AC1 680 aa30.76■■■□□ 2.51
TRIM3-206ENST00000528227 PHF24Q9UPV7 400 aa30.76■■■□□ 2.51
TRIM3-206ENST00000528227 CTDP1Q9Y5B0 961 aaPredicted RBP30.76■■■□□ 2.51
TRIM3-206ENST00000528227 FOXP2O15409 715 aa30.75■■■□□ 2.51
TRIM3-206ENST00000528227 AKR1A1P14550 325 aa30.75■■■□□ 2.51
TRIM3-206ENST00000528227 TFAP4Q01664 338 aa30.75■■■□□ 2.51
TRIM3-206ENST00000528227 C1orf53Q5VUE5 145 aa30.75■■■□□ 2.51
TRIM3-206ENST00000528227 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.75■■■□□ 2.51
TRIM3-206ENST00000528227 DEFB123Q8N688 67 aa30.75■■■□□ 2.51
TRIM3-206ENST00000528227 DDX11Q96FC9 970 aa30.75■■■□□ 2.51
TRIM3-206ENST00000528227 RAVER2Q9HCJ3 691 aaKnown RBP30.75■■■□□ 2.51
TRIM3-206ENST00000528227 CNPY2Q9Y2B0 182 aa30.75■■■□□ 2.51
TRIM3-206ENST00000528227 SLC4A3P48751 1232 aa30.74■■■□□ 2.51
TRIM3-206ENST00000528227 ANKRD45Q5TZF3 282 aa30.74■■■□□ 2.51
TRIM3-206ENST00000528227 SLFN13Q68D06 897 aa30.74■■■□□ 2.51
TRIM3-206ENST00000528227 CCDC129Q6ZRS4 1044 aa30.74■■■□□ 2.51
TRIM3-206ENST00000528227 CRBNQ96SW2 442 aa30.74■■■□□ 2.51
TRIM3-206ENST00000528227 SYNGAP1Q96PV0 1343 aa30.73■■■□□ 2.51
TRIM3-206ENST00000528227 PGK1P00558 417 aa30.73■■■□□ 2.51
TRIM3-206ENST00000528227 BMP3P12645 472 aa30.73■■■□□ 2.51
TRIM3-206ENST00000528227 OAZ1P54368 228 aa30.73■■■□□ 2.51
TRIM3-206ENST00000528227 MAMDC4Q6UXC1 1216 aa30.73■■■□□ 2.51
TRIM3-206ENST00000528227 Q7L0L9 218 aa30.73■■■□□ 2.51
TRIM3-206ENST00000528227 RNF180Q86T96 592 aa30.73■■■□□ 2.51
TRIM3-206ENST00000528227 SNAI1O95863 264 aaPredicted RBP30.72■■■□□ 2.51
TRIM3-206ENST00000528227 LENG1Q96BZ8 264 aaPredicted RBP30.72■■■□□ 2.51
TRIM3-206ENST00000528227 PRDM5Q9NQX1 630 aaPredicted RBP30.72■■■□□ 2.51
TRIM3-206ENST00000528227 ZBTB47Q9UFB7 747 aaPredicted RBP30.72■■■□□ 2.51
TRIM3-206ENST00000528227 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.72■■■□□ 2.51
TRIM3-206ENST00000528227 ZNF467Q7Z7K2 595 aaPredicted RBP30.71■■■□□ 2.51
TRIM3-206ENST00000528227 PDLIM7Q9NR12 457 aa30.71■■■□□ 2.51
TRIM3-206ENST00000528227 FBXO40Q9UH90 709 aa30.71■■■□□ 2.51
TRIM3-206ENST00000528227 ADAMTS4O75173 837 aa30.7■■■□□ 2.51
TRIM3-206ENST00000528227 CHST13Q8NET6 341 aa30.7■■■□□ 2.51
TRIM3-206ENST00000528227 EVI5LQ96CN4 794 aa30.7■■■□□ 2.51
TRIM3-206ENST00000528227 GMCL1Q96IK5 515 aa30.7■■■□□ 2.51
TRIM3-206ENST00000528227 TMEM232C9JQI7 657 aa30.69■■■□□ 2.5
TRIM3-206ENST00000528227 FDX1P10109 184 aa30.69■■■□□ 2.5
TRIM3-206ENST00000528227 CTDSPL2Q05D32 466 aa30.69■■■□□ 2.5
TRIM3-206ENST00000528227 ANKRD35Q8N283 1001 aa30.69■■■□□ 2.5
TRIM3-206ENST00000528227 A0A1W2PQ45 241 aaPredicted RBP30.68■■■□□ 2.5
TRIM3-206ENST00000528227 A0A1W2PQY0 241 aa30.68■■■□□ 2.5
TRIM3-206ENST00000528227 STAT2P52630 851 aa30.68■■■□□ 2.5
TRIM3-206ENST00000528227 TLE2Q04725 743 aa30.68■■■□□ 2.5
TRIM3-206ENST00000528227 HDAC1Q13547 482 aaPredicted RBP30.68■■■□□ 2.5
TRIM3-206ENST00000528227 PPP4R3BQ5MIZ7 849 aa30.68■■■□□ 2.5
TRIM3-206ENST00000528227 VPS53Q5VIR6 699 aa30.68■■■□□ 2.5
TRIM3-206ENST00000528227 SH3RF1Q7Z6J0 888 aa30.68■■■□□ 2.5
TRIM3-206ENST00000528227 FGD4Q96M96 766 aa30.68■■■□□ 2.5
TRIM3-206ENST00000528227 INCENPQ9NQS7 918 aa30.68■■■□□ 2.5
TRIM3-206ENST00000528227 MTMR10Q9NXD2 777 aa30.68■■■□□ 2.5
TRIM3-206ENST00000528227 ZHX1Q9UKY1 873 aaPredicted RBP30.68■■■□□ 2.5
TRIM3-206ENST00000528227 FAM184BQ9ULE4 1060 aa30.68■■■□□ 2.5
TRIM3-206ENST00000528227 SYNRGQ9UMZ2 1314 aa30.68■■■□□ 2.5
TRIM3-206ENST00000528227 TRIM43BA6NCK2 446 aa30.67■■■□□ 2.5
TRIM3-206ENST00000528227 TSPY2A6NKD2 308 aa30.67■■■□□ 2.5
TRIM3-206ENST00000528227 PDE1AP54750 535 aa30.67■■■□□ 2.5
TRIM3-206ENST00000528227 FAM160B2Q86V87 743 aa30.67■■■□□ 2.5
TRIM3-206ENST00000528227 BADQ92934 168 aa30.67■■■□□ 2.5
TRIM3-206ENST00000528227 TRIM43Q96BQ3 446 aaPredicted RBP30.67■■■□□ 2.5
TRIM3-206ENST00000528227 IL17RBQ9NRM6 502 aa30.67■■■□□ 2.5
TRIM3-206ENST00000528227 ANAPC4Q9UJX5 808 aa30.67■■■□□ 2.5
TRIM3-206ENST00000528227 ISY1Q9ULR0 285 aaKnown RBP30.67■■■□□ 2.5
TRIM3-206ENST00000528227 SLC1A4P43007 532 aa30.66■■■□□ 2.5
TRIM3-206ENST00000528227 CHURC1Q8WUH1 139 aa30.66■■■□□ 2.5
TRIM3-206ENST00000528227 STAG1Q8WVM7 1258 aa30.66■■■□□ 2.5
TRIM3-206ENST00000528227 TSEN34Q9BSV6 310 aaKnown RBP30.66■■■□□ 2.5
TRIM3-206ENST00000528227 HELLSQ9NRZ9 838 aa30.66■■■□□ 2.5
TRIM3-206ENST00000528227 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.66■■■□□ 2.5
TRIM3-206ENST00000528227 STX8Q9UNK0 236 aa30.66■■■□□ 2.5
TRIM3-206ENST00000528227 TACC3Q9Y6A5 838 aa30.66■■■□□ 2.5
TRIM3-206ENST00000528227 MCCP23508 829 aa30.65■■■□□ 2.5
TRIM3-206ENST00000528227 ACVR2BQ13705 512 aa30.65■■■□□ 2.5
TRIM3-206ENST00000528227 HOMER2Q9NSB8 354 aa30.65■■■□□ 2.5
TRIM3-206ENST00000528227 ZNF536O15090 1300 aa30.65■■■□□ 2.5
TRIM3-206ENST00000528227 COL6A3P12111 3177 aa30.64■■■□□ 2.5
TRIM3-206ENST00000528227 NMT2O60551 498 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms