RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 MIER3Q7Z3K6 550 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 EHBP1Q8NDI1 1231 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 AIFM3Q96NN9 605 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 CEP135Q66GS9 1140 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 TTC12Q9H892 705 aaPredicted RBP16.86■□□□□ 0.29
USP47-207ENST00000527733 RCOR1Q9UKL0 485 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 PLEKHA8P1O95397 391 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 EPB41P11171 864 aaKnown RBP16.86■□□□□ 0.29
USP47-207ENST00000527733 FAM160B2Q86V87 743 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 COA7Q96BR5 231 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 FMN2Q9NZ56 1722 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 UQCRHLA0A096LP55 91 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 UQCRHP07919 91 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 GNG11P61952 73 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 TBC1D8BQ0IIM8 1120 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 PNOCQ13519 176 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 TDRD7Q8NHU6 1098 aaKnown RBP16.86■□□□□ 0.29
USP47-207ENST00000527733 MAP7D2Q96T17 732 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 BLZF1Q9H2G9 400 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 LY9Q9HBG7 655 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 DAGLAQ9Y4D2 1042 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 ARMC9Q7Z3E5 817 aa16.85■□□□□ 0.29
USP47-207ENST00000527733 NOC4LQ9BVI4 516 aaKnown RBP16.85■□□□□ 0.29
USP47-207ENST00000527733 ALDH8A1Q9H2A2 487 aaPredicted RBP16.85■□□□□ 0.29
USP47-207ENST00000527733 NWD1Q149M9 1564 aa16.85■□□□□ 0.29
USP47-207ENST00000527733 GCFC2P16383 781 aaKnown RBP16.85■□□□□ 0.29
USP47-207ENST00000527733 C12orf60Q5U649 245 aa16.85■□□□□ 0.29
USP47-207ENST00000527733 KRBA2Q6ZNG9 492 aa16.85■□□□□ 0.29
USP47-207ENST00000527733 SLC5A4Q9NY91 659 aa16.85■□□□□ 0.29
USP47-207ENST00000527733 IREB2P48200 963 aaKnown RBP16.85■□□□□ 0.29
USP47-207ENST00000527733 DNA2P51530 1060 aa16.85■□□□□ 0.29
USP47-207ENST00000527733 CASP7P55210 303 aa16.85■□□□□ 0.29
USP47-207ENST00000527733 RAD51AP2Q09MP3 1159 aa16.85■□□□□ 0.29
USP47-207ENST00000527733 PNMA6FA0A0J9YX94 578 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 DCAF17Q5H9S7 520 aaPredicted RBP16.84■□□□□ 0.29
USP47-207ENST00000527733 MYCT1Q8N699 235 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 LINC00301Q8NCQ3 95 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 CCDC42Q96M95 316 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 EXOC7Q9UPT5 735 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 CHGBP05060 677 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 TNNT3P45378 269 aaPredicted RBP16.84■□□□□ 0.29
USP47-207ENST00000527733 NDUFA8P51970 172 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 RESTQ13127 1097 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 SGMS1Q86VZ5 419 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 NCAPG2Q86XI2 1143 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 CNGA4Q8IV77 575 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 CEP95Q96GE4 821 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 IFI16Q16666 785 aaKnown RBP16.84■□□□□ 0.29
USP47-207ENST00000527733 NEDD1Q8NHV4 660 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 TBCKQ8TEA7 893 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 VPS16Q9H269 839 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 ZKSCAN5Q9Y2L8 839 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 CALUO43852 315 aaPredicted RBP16.84■□□□□ 0.29
USP47-207ENST00000527733 PTGS1P23219 599 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 FANCCQ00597 558 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 HS1BP3Q53T59 392 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 MAEAQ7L5Y9 396 aa16.84■□□□□ 0.29
USP47-207ENST00000527733 FAM196BA6NMK8 535 aa16.83■□□□□ 0.29
USP47-207ENST00000527733 SEPT2Q15019 361 aa16.83■□□□□ 0.29
USP47-207ENST00000527733 STOX1Q6ZVD7 989 aa16.83■□□□□ 0.29
USP47-207ENST00000527733 DCAF4Q8WV16 495 aa16.83■□□□□ 0.29
USP47-207ENST00000527733 SYMPKQ92797 1274 aaKnown RBP16.83■□□□□ 0.29
USP47-207ENST00000527733 FAM212AQ96EL1 285 aa16.83■□□□□ 0.29
USP47-207ENST00000527733 TMCO5BA8MYB1 307 aa16.83■□□□□ 0.28
USP47-207ENST00000527733 CDC37Q16543 378 aaPredicted RBP16.83■□□□□ 0.28
USP47-207ENST00000527733 SLC4A9Q96Q91 983 aa16.83■□□□□ 0.28
USP47-207ENST00000527733 ZNF341Q9BYN7 854 aa16.83■□□□□ 0.28
USP47-207ENST00000527733 RNF181Q9P0P0 153 aa16.83■□□□□ 0.28
USP47-207ENST00000527733 NMT2O60551 498 aa16.83■□□□□ 0.28
USP47-207ENST00000527733 OTUD6AQ7L8S5 288 aa16.83■□□□□ 0.28
USP47-207ENST00000527733 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.83■□□□□ 0.28
USP47-207ENST00000527733 GPT2Q8TD30 523 aa16.83■□□□□ 0.28
USP47-207ENST00000527733 TEKT3Q9BXF9 490 aa16.83■□□□□ 0.28
USP47-207ENST00000527733 KCNG1Q9UIX4 513 aa16.83■□□□□ 0.28
USP47-207ENST00000527733 STK36Q9NRP7 1315 aa16.83■□□□□ 0.28
USP47-207ENST00000527733 ARID5AQ03989 594 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 CCDC175P0C221 793 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 KRT83P78385 493 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 SBK1Q52WX2 424 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 GPBP1Q86WP2 473 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 TMX1Q9H3N1 280 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 TRIML1Q8N9V2 468 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 GLG1Q92896 1179 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 AK8Q96MA6 479 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 CSRNP2Q9H175 543 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 MRPL44Q9H9J2 332 aaKnown RBP16.82■□□□□ 0.28
USP47-207ENST00000527733 TBC1D7Q9P0N9 293 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 HERC5Q9UII4 1024 aaKnown RBP16.82■□□□□ 0.28
USP47-207ENST00000527733 STRN3Q13033 797 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 HHIPL2Q6UWX4 724 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 MLXIPQ9HAP2 919 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 SH3GLB2Q9NR46 395 aa16.82■□□□□ 0.28
USP47-207ENST00000527733 USP17L5A8MUK1 530 aa16.81■□□□□ 0.28
USP47-207ENST00000527733 GTPBP6O43824 516 aaPredicted RBP16.81■□□□□ 0.28
USP47-207ENST00000527733 CCNA1P78396 465 aa16.81■□□□□ 0.28
USP47-207ENST00000527733 EXOSC10Q01780 885 aaKnown RBP16.81■□□□□ 0.28
USP47-207ENST00000527733 KCTD2Q14681 263 aa16.81■□□□□ 0.28
USP47-207ENST00000527733 NELFBQ8WX92 580 aa16.81■□□□□ 0.28
USP47-207ENST00000527733 FNBP1Q96RU3 617 aa16.81■□□□□ 0.28
USP47-207ENST00000527733 MRVI1Q9Y6F6 885 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms