RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 LRCH3Q96II8 777 aa15.9■□□□□ 0.14
CAPN1-207ENST00000527189 NUP88Q99567 741 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-207ENST00000527189 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.9■□□□□ 0.14
CAPN1-207ENST00000527189 PFASO15067 1338 aa15.9■□□□□ 0.14
CAPN1-207ENST00000527189 BMP3P12645 472 aa15.89■□□□□ 0.13
CAPN1-207ENST00000527189 OAZ1P54368 228 aa15.89■□□□□ 0.13
CAPN1-207ENST00000527189 NUCB1Q02818 461 aa15.89■□□□□ 0.13
CAPN1-207ENST00000527189 FAM47AQ5JRC9 791 aa15.89■□□□□ 0.13
CAPN1-207ENST00000527189 SLFN13Q68D06 897 aa15.89■□□□□ 0.13
CAPN1-207ENST00000527189 MSL3Q8N5Y2 521 aaKnown RBP15.89■□□□□ 0.13
CAPN1-207ENST00000527189 TRPV1Q8NER1 839 aa15.89■□□□□ 0.13
CAPN1-207ENST00000527189 SLC38A10Q9HBR0 1119 aa15.89■□□□□ 0.13
CAPN1-207ENST00000527189 CTDP1Q9Y5B0 961 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-207ENST00000527189 ALPK3Q96L96 1907 aa15.89■□□□□ 0.13
CAPN1-207ENST00000527189 PRUNE2Q8WUY3 3088 aa15.89■□□□□ 0.13
CAPN1-207ENST00000527189 TSPY2A6NKD2 308 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 TRIM6-TRIM34B2RNG4 842 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 DNM1LO00429 736 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 ORC4O43929 436 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 PLA2G6O60733 806 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 IGHDP01880 384 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 FGAP02671 866 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 BMP8BP34820 402 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 MFAP1P55081 439 aaKnown RBP15.88■□□□□ 0.13
CAPN1-207ENST00000527189 ZNF792Q3KQV3 632 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 VPS53Q5VIR6 699 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 SNRNP48Q6IEG0 339 aaKnown RBP15.88■□□□□ 0.13
CAPN1-207ENST00000527189 B4GALNT3Q6L9W6 998 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.88■□□□□ 0.13
CAPN1-207ENST00000527189 EXOC6Q8TAG9 804 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 CHURC1Q8WUH1 139 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 GMCL1Q96IK5 515 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 TINF2Q9BSI4 451 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 ZMYM6O95789 1325 aa15.88■□□□□ 0.13
CAPN1-207ENST00000527189 MUC3AQ02505 3323 aa15.87■□□□□ 0.13
CAPN1-207ENST00000527189 HSPD1P10809 573 aaKnown RBP15.87■□□□□ 0.13
CAPN1-207ENST00000527189 PCP11498 1178 aaKnown RBP15.87■□□□□ 0.13
CAPN1-207ENST00000527189 NOVP48745 357 aa15.87■□□□□ 0.13
CAPN1-207ENST00000527189 CTDSPL2Q05D32 466 aa15.87■□□□□ 0.13
CAPN1-207ENST00000527189 FAM160B2Q86V87 743 aa15.87■□□□□ 0.13
CAPN1-207ENST00000527189 PLEKHM2Q8IWE5 1019 aa15.87■□□□□ 0.13
CAPN1-207ENST00000527189 C7orf61Q8IZ16 206 aa15.87■□□□□ 0.13
CAPN1-207ENST00000527189 LRRC47Q8N1G4 583 aaKnown RBP15.87■□□□□ 0.13
CAPN1-207ENST00000527189 KIFC2Q96AC6 838 aa15.87■□□□□ 0.13
CAPN1-207ENST00000527189 FAM227BQ96M60 508 aa15.87■□□□□ 0.13
CAPN1-207ENST00000527189 FBXO40Q9UH90 709 aa15.87■□□□□ 0.13
CAPN1-207ENST00000527189 COL11A1P12107 1806 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-207ENST00000527189 ZNFX1Q9P2E3 1918 aaKnown RBP15.86■□□□□ 0.13
CAPN1-207ENST00000527189 MYH4Q9Y623 1939 aa15.86■□□□□ 0.13
CAPN1-207ENST00000527189 A0A0D9SFI3 127 aa15.86■□□□□ 0.13
CAPN1-207ENST00000527189 SLC1A4P43007 532 aa15.86■□□□□ 0.13
CAPN1-207ENST00000527189 NT5C2P49902 561 aa15.86■□□□□ 0.13
CAPN1-207ENST00000527189 STAT2P52630 851 aa15.86■□□□□ 0.13
CAPN1-207ENST00000527189 CHST13Q8NET6 341 aa15.86■□□□□ 0.13
CAPN1-207ENST00000527189 STAG1Q8WVM7 1258 aa15.86■□□□□ 0.13
CAPN1-207ENST00000527189 RILPL2Q969X0 211 aa15.86■□□□□ 0.13
CAPN1-207ENST00000527189 DDX11Q96FC9 970 aa15.86■□□□□ 0.13
CAPN1-207ENST00000527189 GDF15Q99988 308 aa15.86■□□□□ 0.13
CAPN1-207ENST00000527189 COL25A1Q9BXS0 654 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-207ENST00000527189 SENP6Q9GZR1 1112 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-207ENST00000527189 IL17RBQ9NRM6 502 aa15.86■□□□□ 0.13
CAPN1-207ENST00000527189 TCP11L1Q9NUJ3 509 aa15.86■□□□□ 0.13
CAPN1-207ENST00000527189 STX8Q9UNK0 236 aa15.86■□□□□ 0.13
CAPN1-207ENST00000527189 DNAJC25-GNG10A0A024R161 153 aa15.85■□□□□ 0.13
CAPN1-207ENST00000527189 TMEM232C9JQI7 657 aa15.85■□□□□ 0.13
CAPN1-207ENST00000527189 RANBP6O60518 1105 aaKnown RBP15.85■□□□□ 0.13
CAPN1-207ENST00000527189 PGK2P07205 417 aa15.85■□□□□ 0.13
CAPN1-207ENST00000527189 SDSP20132 328 aa15.85■□□□□ 0.13
CAPN1-207ENST00000527189 NMIQ13287 307 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-207ENST00000527189 RCSD1Q6JBY9 416 aa15.85■□□□□ 0.13
CAPN1-207ENST00000527189 MAMDC4Q6UXC1 1216 aa15.85■□□□□ 0.13
CAPN1-207ENST00000527189 ZNF467Q7Z7K2 595 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-207ENST00000527189 CPXCR1Q8N123 301 aa15.85■□□□□ 0.13
CAPN1-207ENST00000527189 RIPK3Q9Y572 518 aa15.85■□□□□ 0.13
CAPN1-207ENST00000527189 CCDC171Q6TFL3 1326 aa15.85■□□□□ 0.13
CAPN1-207ENST00000527189 KBTBD13C9JR72 458 aa15.84■□□□□ 0.13
CAPN1-207ENST00000527189 HIP1O00291 1037 aa15.84■□□□□ 0.13
CAPN1-207ENST00000527189 MCCP23508 829 aa15.84■□□□□ 0.13
CAPN1-207ENST00000527189 LRRC26Q2I0M4 334 aa15.84■□□□□ 0.13
CAPN1-207ENST00000527189 PRAMEF19Q5SWL8 479 aa15.84■□□□□ 0.13
CAPN1-207ENST00000527189 RAVER2Q9HCJ3 691 aaKnown RBP15.84■□□□□ 0.13
CAPN1-207ENST00000527189 INCENPQ9NQS7 918 aa15.84■□□□□ 0.13
CAPN1-207ENST00000527189 CNPY2Q9Y2B0 182 aa15.84■□□□□ 0.13
CAPN1-207ENST00000527189 SYNGAP1Q96PV0 1343 aa15.84■□□□□ 0.13
CAPN1-207ENST00000527189 RARBP10826 455 aa15.83■□□□□ 0.12
CAPN1-207ENST00000527189 TKFCQ3LXA3 575 aa15.83■□□□□ 0.12
CAPN1-207ENST00000527189 ZNF589Q86UQ0 364 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-207ENST00000527189 ANKRD35Q8N283 1001 aa15.83■□□□□ 0.12
CAPN1-207ENST00000527189 TTC14Q96N46 770 aa15.83■□□□□ 0.12
CAPN1-207ENST00000527189 RNF41Q9H4P4 317 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-207ENST00000527189 ZMYND8Q9ULU4 1186 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-207ENST00000527189 SUPT16HQ9Y5B9 1047 aaKnown RBP15.83■□□□□ 0.12
CAPN1-207ENST00000527189 TACC3Q9Y6A5 838 aa15.83■□□□□ 0.12
CAPN1-207ENST00000527189 FRMPD3Q5JV73 1810 aa15.82■□□□□ 0.12
CAPN1-207ENST00000527189 ZNF865P0CJ78 1059 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-207ENST00000527189 AKR1A1P14550 325 aa15.82■□□□□ 0.12
CAPN1-207ENST00000527189 GJC2Q5T442 439 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-207ENST00000527189 MFSD6Q6ZSS7 791 aa15.82■□□□□ 0.12
CAPN1-207ENST00000527189 DCAF4Q8WV16 495 aa15.82■□□□□ 0.12
CAPN1-207ENST00000527189 TOMM22Q9NS69 142 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms