RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 SLC35G1Q2M3R5 365 aa15.97■□□□□ 0.15
CD44-224ENST00000526669 GPATCH4Q5T3I0 446 aaKnown RBP15.97■□□□□ 0.15
CD44-224ENST00000526669 SYDE2Q5VT97 1194 aa15.97■□□□□ 0.15
CD44-224ENST00000526669 NBPF11Q86T75 865 aa15.97■□□□□ 0.15
CD44-224ENST00000526669 ATG4CQ96DT6 458 aa15.97■□□□□ 0.15
CD44-224ENST00000526669 P2RX7Q99572 595 aaKnown RBP15.97■□□□□ 0.15
CD44-224ENST00000526669 SLF1Q9BQI6 1058 aa15.97■□□□□ 0.15
CD44-224ENST00000526669 VAT1LQ9HCJ6 419 aa15.97■□□□□ 0.15
CD44-224ENST00000526669 FAM217BQ9NTX9 383 aaPredicted RBP15.97■□□□□ 0.15
CD44-224ENST00000526669 FEM1BQ9UK73 627 aa15.97■□□□□ 0.15
CD44-224ENST00000526669 NID2Q14112 1375 aa15.97■□□□□ 0.15
CD44-224ENST00000526669 PEX10O60683 326 aa15.96■□□□□ 0.15
CD44-224ENST00000526669 PFKFB2O60825 505 aa15.96■□□□□ 0.15
CD44-224ENST00000526669 OSBPP22059 807 aa15.96■□□□□ 0.15
CD44-224ENST00000526669 HOXA7P31268 230 aaPredicted RBP15.96■□□□□ 0.15
CD44-224ENST00000526669 KIF5BP33176 963 aa15.96■□□□□ 0.15
CD44-224ENST00000526669 TM4SF4P48230 202 aa15.96■□□□□ 0.15
CD44-224ENST00000526669 ST3GAL1Q11201 340 aa15.96■□□□□ 0.15
CD44-224ENST00000526669 TAF1CQ15572 869 aaPredicted RBP15.96■□□□□ 0.15
CD44-224ENST00000526669 TMTC3Q6ZXV5 915 aa15.96■□□□□ 0.15
CD44-224ENST00000526669 CCDC83Q8IWF9 413 aa15.96■□□□□ 0.15
CD44-224ENST00000526669 SRBD1Q8N5C6 995 aaKnown RBP15.96■□□□□ 0.15
CD44-224ENST00000526669 MAP3K14Q99558 947 aa15.96■□□□□ 0.15
CD44-224ENST00000526669 TSHZ2Q9NRE2 1034 aa15.96■□□□□ 0.15
CD44-224ENST00000526669 RBM28Q9NW13 759 aaKnown RBP15.96■□□□□ 0.15
CD44-224ENST00000526669 PPP1R9AQ9ULJ8 1098 aa15.96■□□□□ 0.15
CD44-224ENST00000526669 PLXNA1Q9UIW2 1896 aa15.96■□□□□ 0.15
CD44-224ENST00000526669 CASP8AP2Q9UKL3 1982 aa15.96■□□□□ 0.15
CD44-224ENST00000526669 hCG_1642624A0A1W2PR95 340 aa15.95■□□□□ 0.14
CD44-224ENST00000526669 SPDYE16A6NNV3 312 aaPredicted RBP15.95■□□□□ 0.14
CD44-224ENST00000526669 TAL1P17542 331 aaPredicted RBP15.95■□□□□ 0.14
CD44-224ENST00000526669 DSG3P32926 999 aa15.95■□□□□ 0.14
CD44-224ENST00000526669 MAP2K2P36507 400 aa15.95■□□□□ 0.14
CD44-224ENST00000526669 RCAN1P53805 252 aa15.95■□□□□ 0.14
CD44-224ENST00000526669 INHBEP58166 350 aa15.95■□□□□ 0.14
CD44-224ENST00000526669 FAM160B2Q86V87 743 aa15.95■□□□□ 0.14
CD44-224ENST00000526669 CHURC1Q8WUH1 139 aa15.95■□□□□ 0.14
CD44-224ENST00000526669 GTF3C6Q969F1 213 aa15.95■□□□□ 0.14
CD44-224ENST00000526669 TMX3Q96JJ7 454 aa15.95■□□□□ 0.14
CD44-224ENST00000526669 PAGR1Q9BTK6 254 aa15.95■□□□□ 0.14
CD44-224ENST00000526669 PNMA3Q9UL41 463 aa15.95■□□□□ 0.14
CD44-224ENST00000526669 PRR12Q9ULL5 1215 aa15.95■□□□□ 0.14
CD44-224ENST00000526669 CNTNAP5Q8WYK1 1306 aa15.94■□□□□ 0.14
CD44-224ENST00000526669 LCTP09848 1927 aa15.94■□□□□ 0.14
CD44-224ENST00000526669 CYTH3O43739 400 aa15.94■□□□□ 0.14
CD44-224ENST00000526669 HERVK_113P62684 666 aa15.94■□□□□ 0.14
CD44-224ENST00000526669 COG2Q14746 738 aa15.94■□□□□ 0.14
CD44-224ENST00000526669 OTUD7BQ6GQQ9 843 aa15.94■□□□□ 0.14
CD44-224ENST00000526669 CCDC174Q6PII3 467 aa15.94■□□□□ 0.14
CD44-224ENST00000526669 BTNL9Q6UXG8 535 aa15.94■□□□□ 0.14
CD44-224ENST00000526669 HOMER1Q86YM7 354 aa15.94■□□□□ 0.14
CD44-224ENST00000526669 HSCBQ8IWL3 235 aa15.94■□□□□ 0.14
CD44-224ENST00000526669 ADGRF4Q8IZF3 695 aa15.94■□□□□ 0.14
CD44-224ENST00000526669 ZSCAN31Q96LW9 406 aaPredicted RBP15.94■□□□□ 0.14
CD44-224ENST00000526669 PARK7Q99497 189 aaKnown RBP15.94■□□□□ 0.14
CD44-224ENST00000526669 MCM3APO60318 1980 aa15.94■□□□□ 0.14
CD44-224ENST00000526669 CPLX1O14810 134 aa15.93■□□□□ 0.14
CD44-224ENST00000526669 MCM2P49736 904 aa15.93■□□□□ 0.14
CD44-224ENST00000526669 GNAQP50148 359 aa15.93■□□□□ 0.14
CD44-224ENST00000526669 PRPF38AQ8NAV1 312 aaKnown RBP15.93■□□□□ 0.14
CD44-224ENST00000526669 SMCR8Q8TEV9 937 aaPredicted RBP15.93■□□□□ 0.14
CD44-224ENST00000526669 PHKBQ93100 1093 aa15.93■□□□□ 0.14
CD44-224ENST00000526669 JMJD4Q9H9V9 463 aa15.93■□□□□ 0.14
CD44-224ENST00000526669 SH2B1Q9NRF2 756 aaPredicted RBP15.93■□□□□ 0.14
CD44-224ENST00000526669 SLC45A1Q9Y2W3 748 aa15.93■□□□□ 0.14
CD44-224ENST00000526669 CTDP1Q9Y5B0 961 aaPredicted RBP15.93■□□□□ 0.14
CD44-224ENST00000526669 CEP350Q5VT06 3117 aa15.93■□□□□ 0.14
CD44-224ENST00000526669 CCDC196A0A1B0GTZ2 297 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 K7ELQ4 463 aaPredicted RBP15.92■□□□□ 0.14
CD44-224ENST00000526669 PLA2G6O60733 806 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 SLC4A3P48751 1232 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 CRHR2Q13324 411 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 NTRK3Q16288 839 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 CDC37Q16543 378 aaPredicted RBP15.92■□□□□ 0.14
CD44-224ENST00000526669 POTEEQ6S8J3 1075 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 DNAJC5GQ8N7S2 189 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 SNX21Q969T3 373 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 PIGSQ96S52 555 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 SPZ1Q9BXG8 430 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 SLC26A6Q9BXS9 759 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 R3HDMLQ9H3Y0 253 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 BTBD7Q9P203 1132 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 CPA4Q9UI42 421 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 PCNTO95613 3336 aa15.92■□□□□ 0.14
CD44-224ENST00000526669 VWA5AO00534 786 aa15.91■□□□□ 0.14
CD44-224ENST00000526669 JAK2O60674 1132 aa15.91■□□□□ 0.14
CD44-224ENST00000526669 ZBED4O75132 1171 aa15.91■□□□□ 0.14
CD44-224ENST00000526669 TRPA1O75762 1119 aa15.91■□□□□ 0.14
CD44-224ENST00000526669 CNMDO75829 334 aa15.91■□□□□ 0.14
CD44-224ENST00000526669 ECM2O94769 699 aaPredicted RBP15.91■□□□□ 0.14
CD44-224ENST00000526669 CTDNEP1O95476 244 aa15.91■□□□□ 0.14
CD44-224ENST00000526669 PLS1Q14651 629 aa15.91■□□□□ 0.14
CD44-224ENST00000526669 QRICH1Q2TAL8 776 aa15.91■□□□□ 0.14
CD44-224ENST00000526669 REM2Q8IYK8 340 aaPredicted RBP15.91■□□□□ 0.14
CD44-224ENST00000526669 CPXCR1Q8N123 301 aa15.91■□□□□ 0.14
CD44-224ENST00000526669 LZTS2Q9BRK4 669 aa15.91■□□□□ 0.14
CD44-224ENST00000526669 RANBP17Q9H2T7 1088 aaKnown RBP15.91■□□□□ 0.14
CD44-224ENST00000526669 RIOX1Q9H6W3 641 aa15.91■□□□□ 0.14
CD44-224ENST00000526669 ZFYVE28Q9HCC9 887 aa15.91■□□□□ 0.14
CD44-224ENST00000526669 RAVER2Q9HCJ3 691 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms