RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 CHMLP26374 656 aa13.14□□□□□ -0.31
SNRNP35-203ENST00000526639 STAT3P40763 770 aa13.14□□□□□ -0.31
SNRNP35-203ENST00000526639 SLC1A4P43007 532 aa13.14□□□□□ -0.31
SNRNP35-203ENST00000526639 KCTD1Q719H9 257 aa13.14□□□□□ -0.31
SNRNP35-203ENST00000526639 DPP9Q86TI2 863 aa13.14□□□□□ -0.31
SNRNP35-203ENST00000526639 CPXCR1Q8N123 301 aa13.14□□□□□ -0.31
SNRNP35-203ENST00000526639 NPLOC4Q8TAT6 608 aa13.14□□□□□ -0.31
SNRNP35-203ENST00000526639 STAG1Q8WVM7 1258 aa13.14□□□□□ -0.31
SNRNP35-203ENST00000526639 ZKSCAN3Q9BRR0 538 aa13.14□□□□□ -0.31
SNRNP35-203ENST00000526639 DSCC1Q9BVC3 393 aa13.14□□□□□ -0.31
SNRNP35-203ENST00000526639 PAK6Q9NQU5 681 aaPredicted RBP13.14□□□□□ -0.31
SNRNP35-203ENST00000526639 RPTORQ8N122 1335 aa13.13□□□□□ -0.31
SNRNP35-203ENST00000526639 CACNB2Q08289 660 aaPredicted RBP13.13□□□□□ -0.31
SNRNP35-203ENST00000526639 REPS2Q8NFH8 660 aa13.13□□□□□ -0.31
SNRNP35-203ENST00000526639 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNRNP35-203ENST00000526639 MROH8Q9H579 483 aa13.13□□□□□ -0.31
SNRNP35-203ENST00000526639 HMX1Q9NP08 348 aaPredicted RBP13.13□□□□□ -0.31
SNRNP35-203ENST00000526639 STRNO43815 780 aa13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 TFRCP02786 760 aaKnown RBP13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 IKQ13123 557 aaPredicted RBP13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 SHCBP1Q8NEM2 672 aa13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 FEM1BQ9UK73 627 aa13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 SYNPO2Q9UMS6 1093 aa13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 RIPK3Q9Y572 518 aa13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 COBLO75128 1261 aa13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 CCND3P30281 292 aaPredicted RBP13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 CYP2C19P33261 490 aa13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 STAT2P52630 851 aa13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 IMMTQ16891 758 aaKnown RBP13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 SNRNP48Q6IEG0 339 aaKnown RBP13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 TMEM47Q9BQJ4 181 aa13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 RNF41Q9H4P4 317 aaPredicted RBP13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 RAVER2Q9HCJ3 691 aaKnown RBP13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 CTDP1Q9Y5B0 961 aaPredicted RBP13.12□□□□□ -0.31
SNRNP35-203ENST00000526639 B4E1Z4 1266 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 KDM4AO75164 1064 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 SLC25A27O95847 323 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 PGK2P07205 417 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 FCER1AP12319 257 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 NOVP48745 357 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 PTH1RQ03431 593 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 PPP4R3BQ5MIZ7 849 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 MAP3K21Q5TCX8 1036 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 RIOX2Q8IUF8 465 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 RUFY2Q8WXA3 655 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 ESR2Q92731 530 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 GMCL1Q96IK5 515 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 ZBED4O75132 1171 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 HOXC6P09630 235 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 PCP11498 1178 aaKnown RBP13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 SNAP25P60880 206 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 RCSD1Q6JBY9 416 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 TRMT44Q8IYL2 757 aaKnown RBP13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 MMP19Q99542 508 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 TEX13BQ9BXU2 312 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 SLC38A10Q9HBR0 1119 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 TCP11L1Q9NUJ3 509 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 CTNNA3Q9UI47 895 aa13.11□□□□□ -0.31
SNRNP35-203ENST00000526639 DNAH12Q6ZR08 3092 aa13.1□□□□□ -0.31
SNRNP35-203ENST00000526639 TOP1P11387 765 aaKnown RBP13.1□□□□□ -0.31
SNRNP35-203ENST00000526639 KCTD2Q14681 263 aa13.1□□□□□ -0.31
SNRNP35-203ENST00000526639 CCDC96Q2M329 555 aa13.1□□□□□ -0.31
SNRNP35-203ENST00000526639 HOMER2Q9NSB8 354 aa13.1□□□□□ -0.31
SNRNP35-203ENST00000526639 ZSWIM5Q9P217 1185 aa13.1□□□□□ -0.31
SNRNP35-203ENST00000526639 FRMPD2Q68DX3 1309 aaPredicted RBP13.1□□□□□ -0.31
SNRNP35-203ENST00000526639 SGSM2O43147 1006 aa13.09□□□□□ -0.31
SNRNP35-203ENST00000526639 CNGA1P29973 690 aa13.09□□□□□ -0.31
SNRNP35-203ENST00000526639 SLC16A2P36021 539 aa13.09□□□□□ -0.31
SNRNP35-203ENST00000526639 MFSD14CQ5VZR4 134 aa13.09□□□□□ -0.31
SNRNP35-203ENST00000526639 TTBK2Q6IQ55 1244 aa13.09□□□□□ -0.31
SNRNP35-203ENST00000526639 CHURC1Q8WUH1 139 aa13.09□□□□□ -0.31
SNRNP35-203ENST00000526639 RAD50Q92878 1312 aa13.09□□□□□ -0.31
SNRNP35-203ENST00000526639 ABRAQ8N0Z2 381 aa13.09□□□□□ -0.31
SNRNP35-203ENST00000526639 AGBL1Q96MI9 1066 aa13.09□□□□□ -0.31
SNRNP35-203ENST00000526639 TTC14Q96N46 770 aa13.09□□□□□ -0.31
SNRNP35-203ENST00000526639 CRISPLD2Q9H0B8 497 aa13.09□□□□□ -0.31
SNRNP35-203ENST00000526639 GPCPD1Q9NPB8 672 aa13.09□□□□□ -0.31
SNRNP35-203ENST00000526639 ATP2A1O14983 1001 aa13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 FARP2O94887 1054 aaPredicted RBP13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 CYP21A2P08686 494 aa13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 PRAMEF19Q5SWL8 479 aa13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 CCDC174Q6PII3 467 aa13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 UBE2Q1Q7Z7E8 422 aa13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 FAM160B2Q86V87 743 aa13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 IQCA1Q86XH1 822 aa13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 DIS3LQ8TF46 1054 aaKnown RBP13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 PAWRQ96IZ0 340 aaKnown RBP13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 MAML3Q96JK9 1138 aa13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 SLC5A4Q9NY91 659 aa13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 PRR12Q9ULL5 1215 aa13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 TAF6LQ9Y6J9 622 aa13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 ZNFX1Q9P2E3 1918 aaKnown RBP13.08□□□□□ -0.32
SNRNP35-203ENST00000526639 LAMA4Q16363 1823 aa13.07□□□□□ -0.32
SNRNP35-203ENST00000526639 PDHBP11177 359 aa13.07□□□□□ -0.32
SNRNP35-203ENST00000526639 TRPV1Q8NER1 839 aa13.07□□□□□ -0.32
SNRNP35-203ENST00000526639 DCAF4Q8WV16 495 aa13.07□□□□□ -0.32
SNRNP35-203ENST00000526639 DDX11Q96FC9 970 aa13.07□□□□□ -0.32
SNRNP35-203ENST00000526639 ZSCAN10Q96SZ4 725 aaPredicted RBP13.07□□□□□ -0.32
SNRNP35-203ENST00000526639 ZNF536O15090 1300 aa13.07□□□□□ -0.32
SNRNP35-203ENST00000526639 GOLGA8HP0CJ92 632 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms