RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 KCNH6Q9H252 994 aa13.14□□□□□ -0.31
NEDD8-204ENST00000526430 MTIF3Q9H2K0 278 aaKnown RBP13.14□□□□□ -0.31
NEDD8-204ENST00000526430 ZDBF2Q9HCK1 2354 aa13.13□□□□□ -0.31
NEDD8-204ENST00000526430 COL4A4P53420 1690 aaPredicted RBP13.13□□□□□ -0.31
NEDD8-204ENST00000526430 TCRBV5S4A2TA0A5A2 114 aa13.13□□□□□ -0.31
NEDD8-204ENST00000526430 COBLO75128 1261 aa13.13□□□□□ -0.31
NEDD8-204ENST00000526430 GSPT1P15170 499 aaKnown RBP13.13□□□□□ -0.31
NEDD8-204ENST00000526430 CSF2RAP15509 400 aa13.13□□□□□ -0.31
NEDD8-204ENST00000526430 PRAMEF19Q5SWL8 479 aa13.13□□□□□ -0.31
NEDD8-204ENST00000526430 MAML3Q96JK9 1138 aa13.13□□□□□ -0.31
NEDD8-204ENST00000526430 DNAJC2Q99543 621 aaKnown RBP13.13□□□□□ -0.31
NEDD8-204ENST00000526430 FEZ1Q99689 392 aa13.13□□□□□ -0.31
NEDD8-204ENST00000526430 MOV10L1Q9BXT6 1211 aaKnown RBP13.13□□□□□ -0.31
NEDD8-204ENST00000526430 TRIM34Q9BYJ4 488 aa13.13□□□□□ -0.31
NEDD8-204ENST00000526430 STARD7Q9NQZ5 370 aa13.13□□□□□ -0.31
NEDD8-204ENST00000526430 PAG1Q9NWQ8 432 aa13.13□□□□□ -0.31
NEDD8-204ENST00000526430 YBX2Q9Y2T7 364 aaKnown RBP13.13□□□□□ -0.31
NEDD8-204ENST00000526430 MOXD2PA6NHM9 499 aa13.12□□□□□ -0.31
NEDD8-204ENST00000526430 ADAMTS4O75173 837 aa13.12□□□□□ -0.31
NEDD8-204ENST00000526430 PGK1P00558 417 aa13.12□□□□□ -0.31
NEDD8-204ENST00000526430 ACLYP53396 1101 aa13.12□□□□□ -0.31
NEDD8-204ENST00000526430 NHLH1Q02575 133 aa13.12□□□□□ -0.31
NEDD8-204ENST00000526430 MICALL1Q8N3F8 863 aa13.12□□□□□ -0.31
NEDD8-204ENST00000526430 CRACR2BQ8N4Y2 399 aaPredicted RBP13.12□□□□□ -0.31
NEDD8-204ENST00000526430 PLCG2P16885 1265 aa13.11□□□□□ -0.31
NEDD8-204ENST00000526430 SKIV2LQ15477 1246 aaKnown RBP13.11□□□□□ -0.31
NEDD8-204ENST00000526430 PPP2R2DQ66LE6 453 aa13.11□□□□□ -0.31
NEDD8-204ENST00000526430 KBTBD3Q8NAB2 608 aa13.11□□□□□ -0.31
NEDD8-204ENST00000526430 SH3RF3Q8TEJ3 882 aaPredicted RBP13.11□□□□□ -0.31
NEDD8-204ENST00000526430 SPATC1LQ9H0A9 340 aa13.11□□□□□ -0.31
NEDD8-204ENST00000526430 MROH8Q9H579 483 aa13.11□□□□□ -0.31
NEDD8-204ENST00000526430 IL23AQ9NPF7 189 aa13.11□□□□□ -0.31
NEDD8-204ENST00000526430 MTCH2Q9Y6C9 303 aa13.11□□□□□ -0.31
NEDD8-204ENST00000526430 ELP1O95163 1332 aa13.11□□□□□ -0.31
NEDD8-204ENST00000526430 FLT1P17948 1338 aa13.11□□□□□ -0.31
NEDD8-204ENST00000526430 USP34Q70CQ2 3546 aa13.1□□□□□ -0.31
NEDD8-204ENST00000526430 GTPBP6O43824 516 aaPredicted RBP13.1□□□□□ -0.31
NEDD8-204ENST00000526430 GH2P01242 217 aa13.1□□□□□ -0.31
NEDD8-204ENST00000526430 ACRP10323 421 aa13.1□□□□□ -0.31
NEDD8-204ENST00000526430 AKR1A1P14550 325 aa13.1□□□□□ -0.31
NEDD8-204ENST00000526430 ERCC3P19447 782 aa13.1□□□□□ -0.31
NEDD8-204ENST00000526430 CDK7P50613 346 aa13.1□□□□□ -0.31
NEDD8-204ENST00000526430 ZYXQ15942 572 aaKnown RBP13.1□□□□□ -0.31
NEDD8-204ENST00000526430 TTC22Q5TAA0 569 aa13.1□□□□□ -0.31
NEDD8-204ENST00000526430 NOL10Q9BSC4 688 aaKnown RBP13.1□□□□□ -0.31
NEDD8-204ENST00000526430 RAI14Q9P0K7 980 aa13.1□□□□□ -0.31
NEDD8-204ENST00000526430 LRP2BPQ9P2M1 347 aa13.1□□□□□ -0.31
NEDD8-204ENST00000526430 PCDHA11Q9Y5I1 949 aa13.1□□□□□ -0.31
NEDD8-204ENST00000526430 GTF3C3Q9Y5Q9 886 aa13.1□□□□□ -0.31
NEDD8-204ENST00000526430 CFAP54Q96N23 3096 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 IGSF3O75054 1194 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 IDH1O75874 414 aaKnown RBP13.09□□□□□ -0.31
NEDD8-204ENST00000526430 PDE6AP16499 860 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 ADD2P35612 726 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 PPP4CP60510 307 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 COG2Q14746 738 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 TTF1Q15361 905 aaPredicted RBP13.09□□□□□ -0.31
NEDD8-204ENST00000526430 CCSAPQ6IQ19 270 aaPredicted RBP13.09□□□□□ -0.31
NEDD8-204ENST00000526430 TATDN1Q6P1N9 297 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 MAGEB6Q8N7X4 407 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 MB21D1Q8N884 522 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 KLHDC9Q8NEP7 349 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 HLA-CQ95604 372 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 GPATCH3Q96I76 525 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 RPAP3Q9H6T3 665 aaPredicted RBP13.09□□□□□ -0.31
NEDD8-204ENST00000526430 HOXC10Q9NYD6 342 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
NEDD8-204ENST00000526430 SYNRGQ9UMZ2 1314 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 SPTBN4Q9H254 2564 aa13.09□□□□□ -0.31
NEDD8-204ENST00000526430 SCN5AQ14524 2016 aa13.08□□□□□ -0.31
NEDD8-204ENST00000526430 MYH7P12883 1935 aa13.08□□□□□ -0.32
NEDD8-204ENST00000526430 BAG3O95817 575 aa13.08□□□□□ -0.32
NEDD8-204ENST00000526430 FGBP02675 491 aa13.08□□□□□ -0.32
NEDD8-204ENST00000526430 HLA-DOAP06340 250 aa13.08□□□□□ -0.32
NEDD8-204ENST00000526430 ZNF865P0CJ78 1059 aaPredicted RBP13.08□□□□□ -0.32
NEDD8-204ENST00000526430 SDSP20132 328 aa13.08□□□□□ -0.32
NEDD8-204ENST00000526430 CST5P28325 142 aaPredicted RBP13.08□□□□□ -0.32
NEDD8-204ENST00000526430 SLC9C2Q5TAH2 1124 aa13.08□□□□□ -0.32
NEDD8-204ENST00000526430 GLT1D1Q96MS3 346 aa13.08□□□□□ -0.32
NEDD8-204ENST00000526430 RIOK1Q9BRS2 568 aaKnown RBP13.08□□□□□ -0.32
NEDD8-204ENST00000526430 TINF2Q9BSI4 451 aa13.08□□□□□ -0.32
NEDD8-204ENST00000526430 PALD1Q9ULE6 856 aa13.08□□□□□ -0.32
NEDD8-204ENST00000526430 ZNF532Q9HCE3 1301 aa13.08□□□□□ -0.32
NEDD8-204ENST00000526430 PTPRSQ13332 1948 aa13.07□□□□□ -0.32
NEDD8-204ENST00000526430 FCER1AP12319 257 aa13.07□□□□□ -0.32
NEDD8-204ENST00000526430 CYP7A1P22680 504 aa13.07□□□□□ -0.32
NEDD8-204ENST00000526430 DYNLL1P63167 89 aaKnown RBP13.07□□□□□ -0.32
NEDD8-204ENST00000526430 UBE3CQ15386 1083 aa13.07□□□□□ -0.32
NEDD8-204ENST00000526430 NAA16Q6N069 864 aaPredicted RBP13.07□□□□□ -0.32
NEDD8-204ENST00000526430 MAPKAPK5Q8IW41 473 aa13.07□□□□□ -0.32
NEDD8-204ENST00000526430 FAM126BQ8IXS8 530 aa13.07□□□□□ -0.32
NEDD8-204ENST00000526430 TGFBRAP1Q8WUH2 860 aa13.07□□□□□ -0.32
NEDD8-204ENST00000526430 OSBP2Q969R2 916 aa13.07□□□□□ -0.32
NEDD8-204ENST00000526430 EVI5LQ96CN4 794 aa13.07□□□□□ -0.32
NEDD8-204ENST00000526430 PUS7LQ9H0K6 701 aaKnown RBP13.07□□□□□ -0.32
NEDD8-204ENST00000526430 CD320Q9NPF0 282 aa13.07□□□□□ -0.32
NEDD8-204ENST00000526430 DIS3Q9Y2L1 958 aaKnown RBP13.07□□□□□ -0.32
NEDD8-204ENST00000526430 NAV1Q8NEY1 1877 aa13.07□□□□□ -0.32
NEDD8-204ENST00000526430 TRIOO75962 3097 aa13.07□□□□□ -0.32
NEDD8-204ENST00000526430 TLR3O15455 904 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms