RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 NPLOC4Q8TAT6 608 aa21.79■■□□□ 1.08
TSPAN4-216ENST00000526055 CHURC1Q8WUH1 139 aa21.79■■□□□ 1.08
TSPAN4-216ENST00000526055 TOMM22Q9NS69 142 aa21.79■■□□□ 1.08
TSPAN4-216ENST00000526055 CTNNA3Q9UI47 895 aa21.79■■□□□ 1.08
TSPAN4-216ENST00000526055 OGDHLQ9ULD0 1010 aa21.79■■□□□ 1.08
TSPAN4-216ENST00000526055 CTDP1Q9Y5B0 961 aaPredicted RBP21.79■■□□□ 1.08
TSPAN4-216ENST00000526055 RAD50Q92878 1312 aa21.79■■□□□ 1.08
TSPAN4-216ENST00000526055 ZNF213O14771 459 aa21.78■■□□□ 1.08
TSPAN4-216ENST00000526055 SLC1A4P43007 532 aa21.78■■□□□ 1.08
TSPAN4-216ENST00000526055 STAT2P52630 851 aa21.78■■□□□ 1.08
TSPAN4-216ENST00000526055 SLC38A10Q9HBR0 1119 aa21.78■■□□□ 1.08
TSPAN4-216ENST00000526055 FLRT1Q9NZU1 646 aa21.78■■□□□ 1.08
TSPAN4-216ENST00000526055 MSCO60682 206 aa21.77■■□□□ 1.08
TSPAN4-216ENST00000526055 HAND2P61296 217 aa21.77■■□□□ 1.08
TSPAN4-216ENST00000526055 KCTD2Q14681 263 aa21.77■■□□□ 1.08
TSPAN4-216ENST00000526055 RRP12Q5JTH9 1297 aaKnown RBP21.77■■□□□ 1.08
TSPAN4-216ENST00000526055 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.77■■□□□ 1.085e-6■■■■■ 45.5
TSPAN4-216ENST00000526055 RUFY2Q8WXA3 655 aa21.77■■□□□ 1.08
TSPAN4-216ENST00000526055 KIFC2Q96AC6 838 aa21.77■■□□□ 1.08
TSPAN4-216ENST00000526055 TTC14Q96N46 770 aa21.77■■□□□ 1.08
TSPAN4-216ENST00000526055 MMP19Q99542 508 aa21.77■■□□□ 1.08
TSPAN4-216ENST00000526055 DIS3Q9Y2L1 958 aaKnown RBP21.77■■□□□ 1.08
TSPAN4-216ENST00000526055 CEP290O15078 2479 aa21.77■■□□□ 1.07
TSPAN4-216ENST00000526055 NMT2O60551 498 aa21.76■■□□□ 1.07
TSPAN4-216ENST00000526055 COBLO75128 1261 aa21.76■■□□□ 1.07
TSPAN4-216ENST00000526055 TOP1P11387 765 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-216ENST00000526055 SNRNP48Q6IEG0 339 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-216ENST00000526055 RCSD1Q6JBY9 416 aa21.76■■□□□ 1.07
TSPAN4-216ENST00000526055 ESR2Q92731 530 aa21.76■■□□□ 1.07
TSPAN4-216ENST00000526055 NBPF3Q9H094 633 aa21.76■■□□□ 1.07
TSPAN4-216ENST00000526055 COL11A1P12107 1806 aaPredicted RBP21.76■■□□□ 1.07
TSPAN4-216ENST00000526055 TMEM232C9JQI7 657 aa21.75■■□□□ 1.07
TSPAN4-216ENST00000526055 MCCP23508 829 aa21.75■■□□□ 1.07
TSPAN4-216ENST00000526055 CCND3P30281 292 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-216ENST00000526055 CCDC178Q5BJE1 867 aa21.75■■□□□ 1.07
TSPAN4-216ENST00000526055 NECAB2Q7Z6G3 386 aa21.75■■□□□ 1.07
TSPAN4-216ENST00000526055 TBC1D10CQ8IV04 446 aa21.75■■□□□ 1.07
TSPAN4-216ENST00000526055 DCAF4Q8WV16 495 aa21.75■■□□□ 1.07
TSPAN4-216ENST00000526055 FBXO40Q9UH90 709 aa21.75■■□□□ 1.07
TSPAN4-216ENST00000526055 IMMTQ16891 758 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-216ENST00000526055 LHX8Q68G74 356 aa21.74■■□□□ 1.07
TSPAN4-216ENST00000526055 MAML3Q96JK9 1138 aa21.74■■□□□ 1.07
TSPAN4-216ENST00000526055 NRBP1Q9UHY1 535 aa21.74■■□□□ 1.07
TSPAN4-216ENST00000526055 CYBAP13498 195 aa21.73■■□□□ 1.07
TSPAN4-216ENST00000526055 CYP2C19P33261 490 aa21.73■■□□□ 1.07
TSPAN4-216ENST00000526055 CHST13Q8NET6 341 aa21.73■■□□□ 1.07
TSPAN4-216ENST00000526055 ISY1Q9ULR0 285 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-216ENST00000526055 CHMLP26374 656 aa21.72■■□□□ 1.07
TSPAN4-216ENST00000526055 IKQ13123 557 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-216ENST00000526055 ZNF792Q3KQV3 632 aa21.72■■□□□ 1.07
TSPAN4-216ENST00000526055 DGKHQ86XP1 1220 aa21.72■■□□□ 1.07
TSPAN4-216ENST00000526055 CPXCR1Q8N123 301 aa21.72■■□□□ 1.07
TSPAN4-216ENST00000526055 MSL3Q8N5Y2 521 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-216ENST00000526055 DPF3Q92784 378 aa21.72■■□□□ 1.07
TSPAN4-216ENST00000526055 PAWRQ96IZ0 340 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-216ENST00000526055 TMEM47Q9BQJ4 181 aa21.72■■□□□ 1.07
TSPAN4-216ENST00000526055 RAVER2Q9HCJ3 691 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-216ENST00000526055 DDX20Q9UHI6 824 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-216ENST00000526055 TKFCQ3LXA3 575 aa21.71■■□□□ 1.07
TSPAN4-216ENST00000526055 CENPQQ7L2Z9 268 aaPredicted RBP21.71■■□□□ 1.07
TSPAN4-216ENST00000526055 IQCA1Q86XH1 822 aa21.71■■□□□ 1.07
TSPAN4-216ENST00000526055 CNNM2Q9H8M5 875 aa21.71■■□□□ 1.07
TSPAN4-216ENST00000526055 RIPK3Q9Y572 518 aa21.71■■□□□ 1.07
TSPAN4-216ENST00000526055 NR2E3Q9Y5X4 410 aa21.71■■□□□ 1.07
TSPAN4-216ENST00000526055 NEDD4P46934 1319 aa21.71■■□□□ 1.07
TSPAN4-216ENST00000526055 LAMA4Q16363 1823 aa21.71■■□□□ 1.07
TSPAN4-216ENST00000526055 MNX1P50219 401 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-216ENST00000526055 BTNL9Q6UXG8 535 aa21.7■■□□□ 1.06
TSPAN4-216ENST00000526055 KCTD1Q719H9 257 aa21.7■■□□□ 1.06
TSPAN4-216ENST00000526055 DDX11Q96FC9 970 aa21.7■■□□□ 1.06
TSPAN4-216ENST00000526055 KRT23Q9C075 422 aa21.7■■□□□ 1.06
TSPAN4-216ENST00000526055 ZNFX1Q9P2E3 1918 aaKnown RBP21.69■■□□□ 1.06
TSPAN4-216ENST00000526055 DNAJC25-GNG10A0A024R161 153 aa21.69■■□□□ 1.06
TSPAN4-216ENST00000526055 SEPT4O43236 478 aa21.69■■□□□ 1.06
TSPAN4-216ENST00000526055 PGK2P07205 417 aa21.69■■□□□ 1.06
TSPAN4-216ENST00000526055 CNGA1P29973 690 aa21.69■■□□□ 1.06
TSPAN4-216ENST00000526055 CCDC96Q2M329 555 aa21.69■■□□□ 1.06
TSPAN4-216ENST00000526055 ZNF467Q7Z7K2 595 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-216ENST00000526055 TRPV1Q8NER1 839 aa21.69■■□□□ 1.06
TSPAN4-216ENST00000526055 DIS3LQ8TF46 1054 aaKnown RBP21.69■■□□□ 1.06
TSPAN4-216ENST00000526055 TINF2Q9BSI4 451 aa21.69■■□□□ 1.06
TSPAN4-216ENST00000526055 IL25Q9H293 177 aa21.69■■□□□ 1.06
TSPAN4-216ENST00000526055 C11orf49Q9H6J7 331 aa21.69■■□□□ 1.06
TSPAN4-216ENST00000526055 PNMA2Q9UL42 364 aa21.69■■□□□ 1.06
TSPAN4-216ENST00000526055 PRR12Q9ULL5 1215 aa21.69■■□□□ 1.06
TSPAN4-216ENST00000526055 ANKS1AQ92625 1134 aa21.68■■□□□ 1.06
TSPAN4-216ENST00000526055 ZNF536O15090 1300 aa21.67■■□□□ 1.06
TSPAN4-216ENST00000526055 SYNGAP1Q96PV0 1343 aa21.67■■□□□ 1.06
TSPAN4-216ENST00000526055 KDM4AO75164 1064 aa21.67■■□□□ 1.06
TSPAN4-216ENST00000526055 SNHG28P0DPA3 235 aa21.67■■□□□ 1.06
TSPAN4-216ENST00000526055 PDHBP11177 359 aa21.67■■□□□ 1.06
TSPAN4-216ENST00000526055 MAMDC4Q6UXC1 1216 aa21.67■■□□□ 1.06
TSPAN4-216ENST00000526055 ANKRD35Q8N283 1001 aa21.67■■□□□ 1.06
TSPAN4-216ENST00000526055 ACAD9Q9H845 621 aa21.67■■□□□ 1.06
TSPAN4-216ENST00000526055 H0YGN5 161 aa21.66■■□□□ 1.06
TSPAN4-216ENST00000526055 SGSM2O43147 1006 aa21.66■■□□□ 1.06
TSPAN4-216ENST00000526055 EVI5O60447 810 aa21.66■■□□□ 1.06
TSPAN4-216ENST00000526055 COL6A1P12109 1028 aa21.66■■□□□ 1.06
TSPAN4-216ENST00000526055 GPATCH4Q5T3I0 446 aaKnown RBP21.66■■□□□ 1.06
TSPAN4-216ENST00000526055 RANBP17Q9H2T7 1088 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms