RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, human

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF3A-209	ENST00000525854	TRPV1	Q8NER1	839 aa		13.78	□□□□□ -0.2
HIF3A-209	ENST00000525854	KIFC2	Q96AC6	838 aa		13.78	□□□□□ -0.2
HIF3A-209	ENST00000525854	GMCL1	Q96IK5	515 aa		13.78	□□□□□ -0.2
HIF3A-209	ENST00000525854	SLC38A10	Q9HBR0	1119 aa		13.78	□□□□□ -0.2
HIF3A-209	ENST00000525854	RBM27	Q9P2N5	1060 aa	Known RBP	13.78	□□□□□ -0.2
HIF3A-209	ENST00000525854	NRBP1	Q9UHY1	535 aa		13.78	□□□□□ -0.2
HIF3A-209	ENST00000525854	ISY1	Q9ULR0	285 aa	Known RBP	13.78	□□□□□ -0.2
HIF3A-209	ENST00000525854	STX8	Q9UNK0	236 aa		13.78	□□□□□ -0.2
HIF3A-209	ENST00000525854	PFAS	O15067	1338 aa		13.78	□□□□□ -0.2
HIF3A-209	ENST00000525854	TRIOBP	Q9H2D6	2365 aa		13.78	□□□□□ -0.2
HIF3A-209	ENST00000525854	DNM1L	O00429	736 aa		13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	ZMYM6	O95789	1325 aa		13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	FGA	P02671	866 aa		13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	PGK2	P07205	417 aa		13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	SLC1A4	P43007	532 aa		13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	FXR1	P51114	621 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	STAT2	P52630	851 aa		13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	NMI	Q13287	307 aa	Predicted RBP	13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	CCDC171	Q6TFL3	1326 aa		13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	FAM160B2	Q86V87	743 aa		13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	PLEKHM2	Q8IWE5	1019 aa		13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	CPXCR1	Q8N123	301 aa		13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	CHURC1	Q8WUH1	139 aa		13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	DDX11	Q96FC9	970 aa		13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	FBXO40	Q9UH90	709 aa		13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.77	□□□□□ -0.21
HIF3A-209	ENST00000525854		A0A1W2PPC1	479 aa		13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	TMEM232	C9JQI7	657 aa		13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	FGR	P09769	529 aa		13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	HSPD1	P10809	573 aa	Known RBP	13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	PC	P11498	1178 aa	Known RBP	13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	SDS	P20132	328 aa		13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	IK	Q13123	557 aa	Predicted RBP	13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	ZNF792	Q3KQV3	632 aa		13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	MSL3	Q8N5Y2	521 aa	Known RBP	13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	STAG1	Q8WVM7	1258 aa		13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	TINF2	Q9BSI4	451 aa		13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	PRO3102	Q9H379	93 aa		13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	TOMM22	Q9NS69	142 aa		13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	PCDH10	Q9P2E7	1040 aa		13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	PARP14	Q460N5	1801 aa		13.76	□□□□□ -0.21
HIF3A-209	ENST00000525854	HIP1	O00291	1037 aa		13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	PLA2G6	O60733	806 aa		13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	MCC	P23508	829 aa		13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	SLC4A3	P48751	1232 aa		13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	PRAMEF19	Q5SWL8	479 aa		13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	CHST13	Q8NET6	341 aa		13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	RAVER2	Q9HCJ3	691 aa	Known RBP	13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	INCENP	Q9NQS7	918 aa		13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	IL17RB	Q9NRM6	502 aa		13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	DIAPH3	Q9NSV4	1193 aa		13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	CNPY2	Q9Y2B0	182 aa		13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	RIPK3	Q9Y572	518 aa		13.75	□□□□□ -0.21
HIF3A-209	ENST00000525854	KBTBD13	C9JR72	458 aa		13.74	□□□□□ -0.21
HIF3A-209	ENST00000525854	NMT2	O60551	498 aa		13.74	□□□□□ -0.21
HIF3A-209	ENST00000525854	NOV	P48745	357 aa		13.74	□□□□□ -0.21
HIF3A-209	ENST00000525854	LRRC26	Q2I0M4	334 aa		13.74	□□□□□ -0.21
HIF3A-209	ENST00000525854	RRP12	Q5JTH9	1297 aa	Known RBP	13.74	□□□□□ -0.21
HIF3A-209	ENST00000525854	RCSD1	Q6JBY9	416 aa		13.74	□□□□□ -0.21
HIF3A-209	ENST00000525854	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
HIF3A-209	ENST00000525854	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.74	□□□□□ -0.21
HIF3A-209	ENST00000525854	ANKRD35	Q8N283	1001 aa		13.74	□□□□□ -0.21
HIF3A-209	ENST00000525854	RNF41	Q9H4P4	317 aa	Predicted RBP	13.74	□□□□□ -0.21
HIF3A-209	ENST00000525854	SYNGAP1	Q96PV0	1343 aa		13.73	□□□□□ -0.21
HIF3A-209	ENST00000525854	MYH4	Q9Y623	1939 aa		13.73	□□□□□ -0.21
HIF3A-209	ENST00000525854	DNAJC25-GNG10	A0A024R161	153 aa		13.73	□□□□□ -0.21
HIF3A-209	ENST00000525854	MYCN	P04198	464 aa	Predicted RBP	13.73	□□□□□ -0.21
HIF3A-209	ENST00000525854	RARB	P10826	455 aa		13.73	□□□□□ -0.21
HIF3A-209	ENST00000525854	TOP1	P11387	765 aa	Known RBP	13.73	□□□□□ -0.21
HIF3A-209	ENST00000525854	NT5C2	P49902	561 aa		13.73	□□□□□ -0.21
HIF3A-209	ENST00000525854	TKFC	Q3LXA3	575 aa		13.73	□□□□□ -0.21
HIF3A-209	ENST00000525854	GJC2	Q5T442	439 aa	Predicted RBP	13.73	□□□□□ -0.21
HIF3A-209	ENST00000525854	MFSD6	Q6ZSS7	791 aa		13.73	□□□□□ -0.21
HIF3A-209	ENST00000525854	DCAF4	Q8WV16	495 aa		13.73	□□□□□ -0.21
HIF3A-209	ENST00000525854	GDF15	Q99988	308 aa		13.73	□□□□□ -0.21
HIF3A-209	ENST00000525854	TCP11L1	Q9NUJ3	509 aa		13.73	□□□□□ -0.21
HIF3A-209	ENST00000525854	COL11A1	P12107	1806 aa	Predicted RBP	13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	AKR1A1	P14550	325 aa		13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	SYN1	P17600	705 aa		13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	BMP8B	P34820	402 aa		13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	HAND2	P61296	217 aa		13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	AKNAD1	Q5T1N1	836 aa		13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	ANO1	Q5XXA6	986 aa		13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	CWC27	Q6UX04	472 aa	Known RBP	13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	MAMDC4	Q6UXC1	1216 aa		13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	KCTD1	Q719H9	257 aa		13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	TTC14	Q96N46	770 aa		13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	ACAD9	Q9H845	621 aa		13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	XPNPEP3	Q9NQH7	507 aa		13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	HOMER2	Q9NSB8	354 aa		13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	TACC3	Q9Y6A5	838 aa		13.72	□□□□□ -0.21
HIF3A-209	ENST00000525854	ZNF213	O14771	459 aa		13.71	□□□□□ -0.21
HIF3A-209	ENST00000525854	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.71	□□□□□ -0.21
HIF3A-209	ENST00000525854	ATN1	P54259	1190 aa	Predicted RBP	13.71	□□□□□ -0.21
HIF3A-209	ENST00000525854	LRRC41	Q15345	812 aa		13.71	□□□□□ -0.21
HIF3A-209	ENST00000525854	CCDC96	Q2M329	555 aa		13.71	□□□□□ -0.21
HIF3A-209	ENST00000525854	RNF180	Q86T96	592 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms