RNA–Protein interactions for RNA: ENST00000525687.5

CNKSR1-210, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 1,200 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-210ENST00000525687 PDE4BQ07343 736 aa16.16■□□□□ 0.18
CNKSR1-210ENST00000525687 LRRC41Q15345 812 aa16.16■□□□□ 0.18
CNKSR1-210ENST00000525687 NEDD1Q8NHV4 660 aa16.16■□□□□ 0.18
CNKSR1-210ENST00000525687 MKL1Q969V6 931 aa16.16■□□□□ 0.18
CNKSR1-210ENST00000525687 CHMP4CQ96CF2 233 aa16.16■□□□□ 0.18
CNKSR1-210ENST00000525687 TINF2Q9BSI4 451 aa16.16■□□□□ 0.18
CNKSR1-210ENST00000525687 RAVER2Q9HCJ3 691 aaKnown RBP16.16■□□□□ 0.18
CNKSR1-210ENST00000525687 CTDP1Q9Y5B0 961 aaPredicted RBP16.16■□□□□ 0.18
CNKSR1-210ENST00000525687 FOXP2O15409 715 aa16.15■□□□□ 0.18
CNKSR1-210ENST00000525687 ZBED4O75132 1171 aa16.15■□□□□ 0.18
CNKSR1-210ENST00000525687 SLC3A2P08195 630 aaKnown RBP16.15■□□□□ 0.18
CNKSR1-210ENST00000525687 ADCYAP1R1P41586 468 aa16.15■□□□□ 0.18
CNKSR1-210ENST00000525687 CTDSPL2Q05D32 466 aa16.15■□□□□ 0.18
CNKSR1-210ENST00000525687 SLC39A5Q6ZMH5 540 aa16.15■□□□□ 0.18
CNKSR1-210ENST00000525687 FERMT2Q96AC1 680 aa16.15■□□□□ 0.18
CNKSR1-210ENST00000525687 DDX11Q96FC9 970 aa16.15■□□□□ 0.18
CNKSR1-210ENST00000525687 ISY1Q9ULR0 285 aaKnown RBP16.15■□□□□ 0.18
CNKSR1-210ENST00000525687 DIS3Q9Y2L1 958 aaKnown RBP16.15■□□□□ 0.18
CNKSR1-210ENST00000525687 PLIN4Q96Q06 1357 aa16.14■□□□□ 0.17
CNKSR1-210ENST00000525687 LAMA3Q16787 3333 aa16.14■□□□□ 0.17
CNKSR1-210ENST00000525687 DNAH12Q6ZR08 3092 aa16.14■□□□□ 0.17
CNKSR1-210ENST00000525687 RARBP10826 455 aa16.14■□□□□ 0.17
CNKSR1-210ENST00000525687 LRIT3Q3SXY7 679 aa16.14■□□□□ 0.17
CNKSR1-210ENST00000525687 SLFN13Q68D06 897 aa16.14■□□□□ 0.17
CNKSR1-210ENST00000525687 GMCL1P1Q8NEA9 526 aa16.14■□□□□ 0.17
CNKSR1-210ENST00000525687 LENG1Q96BZ8 264 aaPredicted RBP16.14■□□□□ 0.17
CNKSR1-210ENST00000525687 LBHD1Q9BQE6 289 aaPredicted RBP16.14■□□□□ 0.17
CNKSR1-210ENST00000525687 XPNPEP3Q9NQH7 507 aa16.14■□□□□ 0.17
CNKSR1-210ENST00000525687 INCENPQ9NQS7 918 aa16.14■□□□□ 0.17
CNKSR1-210ENST00000525687 PRKAG2Q9UGJ0 569 aa16.14■□□□□ 0.17
CNKSR1-210ENST00000525687 NRBP1Q9UHY1 535 aa16.14■□□□□ 0.17
CNKSR1-210ENST00000525687 FEM1BQ9UK73 627 aa16.14■□□□□ 0.17
CNKSR1-210ENST00000525687 PGK1P00558 417 aa16.13■□□□□ 0.17
CNKSR1-210ENST00000525687 ZNF865P0CJ78 1059 aaPredicted RBP16.13■□□□□ 0.17
CNKSR1-210ENST00000525687 BMP3P12645 472 aa16.13■□□□□ 0.17
CNKSR1-210ENST00000525687 TRIM60Q495X7 471 aa16.13■□□□□ 0.17
CNKSR1-210ENST00000525687 VPS53Q5VIR6 699 aa16.13■□□□□ 0.17
CNKSR1-210ENST00000525687 EVI5LQ96CN4 794 aa16.13■□□□□ 0.17
CNKSR1-210ENST00000525687 SLC38A10Q9HBR0 1119 aa16.13■□□□□ 0.17
CNKSR1-210ENST00000525687 PRDM5Q9NQX1 630 aaPredicted RBP16.13■□□□□ 0.17
CNKSR1-210ENST00000525687 CNPY2Q9Y2B0 182 aa16.13■□□□□ 0.17
CNKSR1-210ENST00000525687 TSPY2A6NKD2 308 aa16.12■□□□□ 0.17
CNKSR1-210ENST00000525687 TMEM232C9JQI7 657 aa16.12■□□□□ 0.17
CNKSR1-210ENST00000525687 ATP2A1O14983 1001 aa16.12■□□□□ 0.17
CNKSR1-210ENST00000525687 AKR1A1P14550 325 aa16.12■□□□□ 0.17
CNKSR1-210ENST00000525687 PDE1AP54750 535 aa16.12■□□□□ 0.17
CNKSR1-210ENST00000525687 Q7L0L9 218 aa16.12■□□□□ 0.17
CNKSR1-210ENST00000525687 HOMER2Q9NSB8 354 aa16.12■□□□□ 0.17
CNKSR1-210ENST00000525687 SYNPO2Q9UMS6 1093 aa16.12■□□□□ 0.17
CNKSR1-210ENST00000525687 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.12■□□□□ 0.17
CNKSR1-210ENST00000525687 TACC3Q9Y6A5 838 aa16.12■□□□□ 0.17
CNKSR1-210ENST00000525687 DNAJC25-GNG10A0A024R161 153 aa16.11■□□□□ 0.17
CNKSR1-210ENST00000525687 NMT2O60551 498 aa16.11■□□□□ 0.17
CNKSR1-210ENST00000525687 SNAI1O95863 264 aaPredicted RBP16.11■□□□□ 0.17
CNKSR1-210ENST00000525687 MCCP23508 829 aa16.11■□□□□ 0.17
CNKSR1-210ENST00000525687 IKQ13123 557 aaPredicted RBP16.11■□□□□ 0.17
CNKSR1-210ENST00000525687 HDAC1Q13547 482 aaPredicted RBP16.11■□□□□ 0.17
CNKSR1-210ENST00000525687 SNX17Q15036 470 aa16.11■□□□□ 0.17
CNKSR1-210ENST00000525687 RNF180Q86T96 592 aa16.11■□□□□ 0.17
CNKSR1-210ENST00000525687 ANKRD35Q8N283 1001 aa16.11■□□□□ 0.17
CNKSR1-210ENST00000525687 DEFB123Q8N688 67 aa16.11■□□□□ 0.17
CNKSR1-210ENST00000525687 ZHX1Q9UKY1 873 aaPredicted RBP16.11■□□□□ 0.17
CNKSR1-210ENST00000525687 STX8Q9UNK0 236 aa16.11■□□□□ 0.17
CNKSR1-210ENST00000525687 SLC1A4P43007 532 aa16.1■□□□□ 0.17
CNKSR1-210ENST00000525687 STAT2P52630 851 aa16.1■□□□□ 0.17
CNKSR1-210ENST00000525687 RASGRP2Q7LDG7 609 aa16.1■□□□□ 0.17
CNKSR1-210ENST00000525687 SH3RF1Q7Z6J0 888 aa16.1■□□□□ 0.17
CNKSR1-210ENST00000525687 FAM227BQ96M60 508 aa16.1■□□□□ 0.17
CNKSR1-210ENST00000525687 IL17RBQ9NRM6 502 aa16.1■□□□□ 0.17
CNKSR1-210ENST00000525687 PHF24Q9UPV7 400 aa16.1■□□□□ 0.17
CNKSR1-210ENST00000525687 MTMR7Q9Y216 660 aa16.1■□□□□ 0.17
CNKSR1-210ENST00000525687 SYNGAP1Q96PV0 1343 aa16.1■□□□□ 0.17
CNKSR1-210ENST00000525687 A0A0D9SFI3 127 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 RANBP6O60518 1105 aaKnown RBP16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 OAZ1P54368 228 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 SNAP25P60880 206 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 GPR153Q6NV75 609 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 MAMDC4Q6UXC1 1216 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 KCTD1Q719H9 257 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 MSL3Q8N5Y2 521 aaKnown RBP16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 CHST13Q8NET6 341 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 GMCL1Q96IK5 515 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 FGD4Q96M96 766 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 AGBL1Q96MI9 1066 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 LNPKQ9C0E8 428 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 PDLIM7Q9NR12 457 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 HELLSQ9NRZ9 838 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 FBXO40Q9UH90 709 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 FAM184BQ9ULE4 1060 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 LTBP2Q14767 1821 aa16.09■□□□□ 0.17
CNKSR1-210ENST00000525687 A0A1W2PQ45 241 aaPredicted RBP16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 A0A1W2PQY0 241 aa16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 TRIM43BA6NCK2 446 aa16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 ADAMTS4O75173 837 aa16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 CNTN2Q02246 1040 aa16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 TLE2Q04725 743 aa16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 FAM160B2Q86V87 743 aa16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 CHURC1Q8WUH1 139 aa16.08■□□□□ 0.16
CNKSR1-210ENST00000525687 STAG1Q8WVM7 1258 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms