RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 TEX13BQ9BXU2 312 aa20.67■□□□□ 0.9
NR1H3-228ENST00000525441 NBPF3Q9H094 633 aa20.67■□□□□ 0.9
NR1H3-228ENST00000525441 ZNF214Q9UL59 606 aaPredicted RBP20.67■□□□□ 0.9
NR1H3-228ENST00000525441 TMEM232C9JQI7 657 aa20.66■□□□□ 0.9
NR1H3-228ENST00000525441 TOP1P11387 765 aaKnown RBP20.66■□□□□ 0.9
NR1H3-228ENST00000525441 MCCP23508 829 aa20.66■□□□□ 0.9
NR1H3-228ENST00000525441 STAT2P52630 851 aa20.66■□□□□ 0.9
NR1H3-228ENST00000525441 IKQ13123 557 aaPredicted RBP20.66■□□□□ 0.9
NR1H3-228ENST00000525441 ATP2A1O14983 1001 aa20.65■□□□□ 0.9
NR1H3-228ENST00000525441 CACNB2Q08289 660 aaPredicted RBP20.65■□□□□ 0.9
NR1H3-228ENST00000525441 KCTD2Q14681 263 aa20.65■□□□□ 0.9
NR1H3-228ENST00000525441 CCDC178Q5BJE1 867 aa20.65■□□□□ 0.9
NR1H3-228ENST00000525441 SNRNP48Q6IEG0 339 aaKnown RBP20.65■□□□□ 0.9
NR1H3-228ENST00000525441 RCSD1Q6JBY9 416 aa20.65■□□□□ 0.9
NR1H3-228ENST00000525441 DCAF4Q8WV16 495 aa20.65■□□□□ 0.9
NR1H3-228ENST00000525441 TTC14Q96N46 770 aa20.65■□□□□ 0.9
NR1H3-228ENST00000525441 MMP19Q99542 508 aa20.65■□□□□ 0.9
NR1H3-228ENST00000525441 SLC38A10Q9HBR0 1119 aa20.65■□□□□ 0.9
NR1H3-228ENST00000525441 ZNF236Q9UL36 1845 aa20.64■□□□□ 0.9
NR1H3-228ENST00000525441 NEDD4P46934 1319 aa20.64■□□□□ 0.89
NR1H3-228ENST00000525441 PLA2G6O60733 806 aa20.64■□□□□ 0.89
NR1H3-228ENST00000525441 FARP2O94887 1054 aaPredicted RBP20.64■□□□□ 0.89
NR1H3-228ENST00000525441 OAZ1P54368 228 aa20.64■□□□□ 0.89
NR1H3-228ENST00000525441 NPLOC4Q8TAT6 608 aa20.64■□□□□ 0.89
NR1H3-228ENST00000525441 CRISPLD2Q9H0B8 497 aa20.64■□□□□ 0.89
NR1H3-228ENST00000525441 COL11A1P12107 1806 aaPredicted RBP20.63■□□□□ 0.89
NR1H3-228ENST00000525441 CCDC96Q2M329 555 aa20.63■□□□□ 0.89
NR1H3-228ENST00000525441 OLFML2BQ68BL8 750 aa20.63■□□□□ 0.89
NR1H3-228ENST00000525441 IQCA1Q86XH1 822 aa20.63■□□□□ 0.89
NR1H3-228ENST00000525441 CPXCR1Q8N123 301 aa20.63■□□□□ 0.89
NR1H3-228ENST00000525441 TMEM47Q9BQJ4 181 aa20.63■□□□□ 0.89
NR1H3-228ENST00000525441 KRT23Q9C075 422 aa20.63■□□□□ 0.89
NR1H3-228ENST00000525441 IL25Q9H293 177 aa20.63■□□□□ 0.89
NR1H3-228ENST00000525441 CNNM2Q9H8M5 875 aa20.63■□□□□ 0.89
NR1H3-228ENST00000525441 FLRT1Q9NZU1 646 aa20.63■□□□□ 0.89
NR1H3-228ENST00000525441 MTMR7Q9Y216 660 aa20.63■□□□□ 0.89
NR1H3-228ENST00000525441 LAMA4Q16363 1823 aa20.62■□□□□ 0.89
NR1H3-228ENST00000525441 COBLO75128 1261 aa20.62■□□□□ 0.89
NR1H3-228ENST00000525441 NEFLP07196 543 aa20.62■□□□□ 0.89
NR1H3-228ENST00000525441 PRPF38BQ5VTL8 546 aaKnown RBP20.62■□□□□ 0.89
NR1H3-228ENST00000525441 KCTD1Q719H9 257 aa20.62■□□□□ 0.89
NR1H3-228ENST00000525441 CHMP4CQ96CF2 233 aa20.62■□□□□ 0.89
NR1H3-228ENST00000525441 RAVER2Q9HCJ3 691 aaKnown RBP20.62■□□□□ 0.89
NR1H3-228ENST00000525441 TNRC18O15417 2968 aaPredicted RBP20.61■□□□□ 0.89
NR1H3-228ENST00000525441 SGSM2O43147 1006 aa20.61■□□□□ 0.89
NR1H3-228ENST00000525441 KDM4AO75164 1064 aa20.61■□□□□ 0.89
NR1H3-228ENST00000525441 SLC4A3P48751 1232 aa20.61■□□□□ 0.89
NR1H3-228ENST00000525441 UBE2Q1Q7Z7E8 422 aa20.61■□□□□ 0.89
NR1H3-228ENST00000525441 DGKHQ86XP1 1220 aa20.61■□□□□ 0.89
NR1H3-228ENST00000525441 ANKLE1Q8NAG6 615 aa20.61■□□□□ 0.89
NR1H3-228ENST00000525441 HTATIP2Q9BUP3 242 aa20.61■□□□□ 0.89
NR1H3-228ENST00000525441 FBXO40Q9UH90 709 aa20.61■□□□□ 0.89
NR1H3-228ENST00000525441 U3KPZ7 1027 aaPredicted RBP20.61■□□□□ 0.89
NR1H3-228ENST00000525441 B4E1Z4 1266 aa20.6■□□□□ 0.89
NR1H3-228ENST00000525441 CYP2C19P33261 490 aa20.6■□□□□ 0.89
NR1H3-228ENST00000525441 CHST13Q8NET6 341 aa20.6■□□□□ 0.89
NR1H3-228ENST00000525441 CCDC136Q96JN2 1154 aa20.6■□□□□ 0.89
NR1H3-228ENST00000525441 DIS3Q9Y2L1 958 aaKnown RBP20.6■□□□□ 0.89
NR1H3-228ENST00000525441 BRCA2P51587 3418 aa20.59■□□□□ 0.89
NR1H3-228ENST00000525441 MSCO60682 206 aa20.59■□□□□ 0.89
NR1H3-228ENST00000525441 CCND3P30281 292 aaPredicted RBP20.59■□□□□ 0.89
NR1H3-228ENST00000525441 DDX11Q96FC9 970 aa20.59■□□□□ 0.89
NR1H3-228ENST00000525441 MAML3Q96JK9 1138 aa20.59■□□□□ 0.89
NR1H3-228ENST00000525441 OGDHLQ9ULD0 1010 aa20.59■□□□□ 0.89
NR1H3-228ENST00000525441 RIPK3Q9Y572 518 aa20.59■□□□□ 0.89
NR1H3-228ENST00000525441 IGHA2P01877 340 aa20.58■□□□□ 0.89
NR1H3-228ENST00000525441 PGK2P07205 417 aa20.58■□□□□ 0.89
NR1H3-228ENST00000525441 CNGA1P29973 690 aa20.58■□□□□ 0.89
NR1H3-228ENST00000525441 PTH1RQ03431 593 aa20.58■□□□□ 0.89
NR1H3-228ENST00000525441 TRDNQ13061 729 aa20.58■□□□□ 0.89
NR1H3-228ENST00000525441 TKFCQ3LXA3 575 aa20.58■□□□□ 0.89
NR1H3-228ENST00000525441 KIAA1211Q6ZU35 1233 aa20.58■□□□□ 0.89
NR1H3-228ENST00000525441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.58■□□□□ 0.89
NR1H3-228ENST00000525441 ZSCAN10Q96SZ4 725 aaPredicted RBP20.58■□□□□ 0.89
NR1H3-228ENST00000525441 ZKSCAN3Q9BRR0 538 aa20.58■□□□□ 0.89
NR1H3-228ENST00000525441 UBAC1Q9BSL1 405 aa20.58■□□□□ 0.89
NR1H3-228ENST00000525441 PRR12Q9ULL5 1215 aa20.58■□□□□ 0.89
NR1H3-228ENST00000525441 PDHBP11177 359 aa20.57■□□□□ 0.88
NR1H3-228ENST00000525441 CYBAP13498 195 aa20.57■□□□□ 0.88
NR1H3-228ENST00000525441 ZNF792Q3KQV3 632 aa20.57■□□□□ 0.88
NR1H3-228ENST00000525441 BMP2KLQ5H9B9 411 aa20.57■□□□□ 0.88
NR1H3-228ENST00000525441 BTNL9Q6UXG8 535 aa20.57■□□□□ 0.88
NR1H3-228ENST00000525441 RASGRP2Q7LDG7 609 aa20.57■□□□□ 0.88
NR1H3-228ENST00000525441 NECAB2Q7Z6G3 386 aa20.57■□□□□ 0.88
NR1H3-228ENST00000525441 KAT14Q9H8E8 782 aa20.57■□□□□ 0.88
NR1H3-228ENST00000525441 ZSWIM5Q9P217 1185 aa20.57■□□□□ 0.88
NR1H3-228ENST00000525441 NRBP1Q9UHY1 535 aa20.57■□□□□ 0.88
NR1H3-228ENST00000525441 SYDE2Q5VT97 1194 aa20.56■□□□□ 0.88
NR1H3-228ENST00000525441 ANKRD35Q8N283 1001 aa20.56■□□□□ 0.88
NR1H3-228ENST00000525441 ANKS1AQ92625 1134 aa20.56■□□□□ 0.88
NR1H3-228ENST00000525441 DPF3Q92784 378 aa20.56■□□□□ 0.88
NR1H3-228ENST00000525441 PAWRQ96IZ0 340 aaKnown RBP20.56■□□□□ 0.88
NR1H3-228ENST00000525441 ACAD9Q9H845 621 aa20.56■□□□□ 0.88
NR1H3-228ENST00000525441 GPCPD1Q9NPB8 672 aa20.56■□□□□ 0.88
NR1H3-228ENST00000525441 DDX20Q9UHI6 824 aaKnown RBP20.56■□□□□ 0.88
NR1H3-228ENST00000525441 FRMPD2Q68DX3 1309 aaPredicted RBP20.55■□□□□ 0.88
NR1H3-228ENST00000525441 SNHG28P0DPA3 235 aa20.55■□□□□ 0.88
NR1H3-228ENST00000525441 ZNF543Q08ER8 600 aa20.55■□□□□ 0.88
NR1H3-228ENST00000525441 GPATCH4Q5T3I0 446 aaKnown RBP20.55■□□□□ 0.88
NR1H3-228ENST00000525441 LHX8Q68G74 356 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms