RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 CHMP4CQ96CF2 233 aa14.08□□□□□ -0.16
CLNS1A-202ENST00000525064 YTHDC1Q96MU7 727 aaKnown RBP14.08□□□□□ -0.16
CLNS1A-202ENST00000525064 SLC5A4Q9NY91 659 aa14.08□□□□□ -0.16
CLNS1A-202ENST00000525064 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.08□□□□□ -0.16
CLNS1A-202ENST00000525064 LAMA4Q16363 1823 aa14.07□□□□□ -0.16
CLNS1A-202ENST00000525064 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
CLNS1A-202ENST00000525064 TSPY3P0CV98 308 aa14.07□□□□□ -0.16
CLNS1A-202ENST00000525064 TSPY8P0CW00 308 aa14.07□□□□□ -0.16
CLNS1A-202ENST00000525064 SLC4A3P48751 1232 aa14.07□□□□□ -0.16
CLNS1A-202ENST00000525064 PDE1AP54750 535 aa14.07□□□□□ -0.16
CLNS1A-202ENST00000525064 TFAP4Q01664 338 aa14.07□□□□□ -0.16
CLNS1A-202ENST00000525064 KCTD2Q14681 263 aa14.07□□□□□ -0.16
CLNS1A-202ENST00000525064 LRRC41Q15345 812 aa14.07□□□□□ -0.16
CLNS1A-202ENST00000525064 CPXCR1Q8N123 301 aa14.07□□□□□ -0.16
CLNS1A-202ENST00000525064 MKL1Q969V6 931 aa14.07□□□□□ -0.16
CLNS1A-202ENST00000525064 KIFC2Q96AC6 838 aa14.07□□□□□ -0.16
CLNS1A-202ENST00000525064 TEX13BQ9BXU2 312 aa14.07□□□□□ -0.16
CLNS1A-202ENST00000525064 RAVER2Q9HCJ3 691 aaKnown RBP14.07□□□□□ -0.16
CLNS1A-202ENST00000525064 A0A0D9SFI3 127 aa14.06□□□□□ -0.16
CLNS1A-202ENST00000525064 NMT2O60551 498 aa14.06□□□□□ -0.16
CLNS1A-202ENST00000525064 TTLL1O95922 423 aa14.06□□□□□ -0.16
CLNS1A-202ENST00000525064 ZNF865P0CJ78 1059 aaPredicted RBP14.06□□□□□ -0.16
CLNS1A-202ENST00000525064 HDAC1Q13547 482 aaPredicted RBP14.06□□□□□ -0.16
CLNS1A-202ENST00000525064 SLFN13Q68D06 897 aa14.06□□□□□ -0.16
CLNS1A-202ENST00000525064 GMCL1P1Q8NEA9 526 aa14.06□□□□□ -0.16
CLNS1A-202ENST00000525064 FAM227BQ96M60 508 aa14.06□□□□□ -0.16
CLNS1A-202ENST00000525064 FGD4Q96M96 766 aa14.06□□□□□ -0.16
CLNS1A-202ENST00000525064 TINF2Q9BSI4 451 aa14.06□□□□□ -0.16
CLNS1A-202ENST00000525064 NACAP1Q9BZK3 213 aa14.06□□□□□ -0.16
CLNS1A-202ENST00000525064 UBE2OQ9C0C9 1292 aaKnown RBP14.06□□□□□ -0.16
CLNS1A-202ENST00000525064 SLC38A10Q9HBR0 1119 aa14.06□□□□□ -0.16
CLNS1A-202ENST00000525064 DNAJC25-GNG10A0A024R161 153 aa14.05□□□□□ -0.16
CLNS1A-202ENST00000525064 KBTBD13C9JR72 458 aa14.05□□□□□ -0.16
CLNS1A-202ENST00000525064 COPB2P35606 906 aa14.05□□□□□ -0.16
CLNS1A-202ENST00000525064 PDE4BQ07343 736 aa14.05□□□□□ -0.16
CLNS1A-202ENST00000525064 TDHQ8IZJ6 230 aa14.05□□□□□ -0.16
CLNS1A-202ENST00000525064 PRPF38AQ8NAV1 312 aaKnown RBP14.05□□□□□ -0.16
CLNS1A-202ENST00000525064 FERMT2Q96AC1 680 aa14.05□□□□□ -0.16
CLNS1A-202ENST00000525064 EVI5LQ96CN4 794 aa14.05□□□□□ -0.16
CLNS1A-202ENST00000525064 ZNF287Q9HBT7 754 aa14.05□□□□□ -0.16
CLNS1A-202ENST00000525064 ATP11BQ9Y2G3 1177 aa14.05□□□□□ -0.16
CLNS1A-202ENST00000525064 DIS3Q9Y2L1 958 aaKnown RBP14.05□□□□□ -0.16
CLNS1A-202ENST00000525064 ATP2A1O14983 1001 aa14.04□□□□□ -0.16
CLNS1A-202ENST00000525064 ZBED4O75132 1171 aa14.04□□□□□ -0.16
CLNS1A-202ENST00000525064 PGK1P00558 417 aa14.04□□□□□ -0.16
CLNS1A-202ENST00000525064 BMP3P12645 472 aa14.04□□□□□ -0.16
CLNS1A-202ENST00000525064 ADCYAP1R1P41586 468 aa14.04□□□□□ -0.16
CLNS1A-202ENST00000525064 TRIM60Q495X7 471 aa14.04□□□□□ -0.16
CLNS1A-202ENST00000525064 SLC39A5Q6ZMH5 540 aa14.04□□□□□ -0.16
CLNS1A-202ENST00000525064 ARRDC4Q8NCT1 418 aa14.04□□□□□ -0.16
CLNS1A-202ENST00000525064 LNPKQ9C0E8 428 aa14.04□□□□□ -0.16
CLNS1A-202ENST00000525064 RNF39Q9H2S5 420 aa14.04□□□□□ -0.16
CLNS1A-202ENST00000525064 XPNPEP3Q9NQH7 507 aa14.04□□□□□ -0.16
CLNS1A-202ENST00000525064 IL17RBQ9NRM6 502 aa14.04□□□□□ -0.16
CLNS1A-202ENST00000525064 FEM1BQ9UK73 627 aa14.04□□□□□ -0.16
CLNS1A-202ENST00000525064 TMEM232C9JQI7 657 aa14.03□□□□□ -0.16
CLNS1A-202ENST00000525064 SNAI1O95863 264 aaPredicted RBP14.03□□□□□ -0.16
CLNS1A-202ENST00000525064 SNAP25P60880 206 aa14.03□□□□□ -0.16
CLNS1A-202ENST00000525064 IRX5P78411 483 aaPredicted RBP14.03□□□□□ -0.16
CLNS1A-202ENST00000525064 SNX17Q15036 470 aa14.03□□□□□ -0.16
CLNS1A-202ENST00000525064 LRIT3Q3SXY7 679 aa14.03□□□□□ -0.16
CLNS1A-202ENST00000525064 Q7L0L9 218 aa14.03□□□□□ -0.16
CLNS1A-202ENST00000525064 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.03□□□□□ -0.16
CLNS1A-202ENST00000525064 ZNF589Q86UQ0 364 aaPredicted RBP14.03□□□□□ -0.16
CLNS1A-202ENST00000525064 ZBTB47Q9UFB7 747 aaPredicted RBP14.03□□□□□ -0.16
CLNS1A-202ENST00000525064 NRBP1Q9UHY1 535 aa14.03□□□□□ -0.16
CLNS1A-202ENST00000525064 ISY1Q9ULR0 285 aaKnown RBP14.03□□□□□ -0.16
CLNS1A-202ENST00000525064 SYNPO2Q9UMS6 1093 aa14.03□□□□□ -0.16
CLNS1A-202ENST00000525064 ZNF536O15090 1300 aa14.03□□□□□ -0.16
CLNS1A-202ENST00000525064 SYNGAP1Q96PV0 1343 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 TSPY2A6NKD2 308 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 ADCY6O43306 1168 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 ADAMTS4O75173 837 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 SLC3A2P08195 630 aaKnown RBP14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 RARBP10826 455 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 AKR1A1P14550 325 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 MCCP23508 829 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 NMIQ13287 307 aaPredicted RBP14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 KCTD1Q719H9 257 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 SH3RF1Q7Z6J0 888 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 DDX11Q96FC9 970 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 GMCL1Q96IK5 515 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 PDLIM7Q9NR12 457 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 HELLSQ9NRZ9 838 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 HOMER2Q9NSB8 354 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 ANAPC4Q9UJX5 808 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 ZHX1Q9UKY1 873 aaPredicted RBP14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 STX8Q9UNK0 236 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 PHF24Q9UPV7 400 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 MTMR7Q9Y216 660 aa14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 CTDP1Q9Y5B0 961 aaPredicted RBP14.02□□□□□ -0.17
CLNS1A-202ENST00000525064 SYNRGQ9UMZ2 1314 aa14.01□□□□□ -0.17
CLNS1A-202ENST00000525064 MYADML2A6NDP7 307 aa14.01□□□□□ -0.17
CLNS1A-202ENST00000525064 IGHDP01880 384 aa14.01□□□□□ -0.17
CLNS1A-202ENST00000525064 NOVP48745 357 aa14.01□□□□□ -0.17
CLNS1A-202ENST00000525064 STAT2P52630 851 aa14.01□□□□□ -0.17
CLNS1A-202ENST00000525064 CNTN2Q02246 1040 aa14.01□□□□□ -0.17
CLNS1A-202ENST00000525064 ALX1Q15699 326 aa14.01□□□□□ -0.17
CLNS1A-202ENST00000525064 B4GALNT3Q6L9W6 998 aa14.01□□□□□ -0.17
CLNS1A-202ENST00000525064 MAMDC4Q6UXC1 1216 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms