RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 SLC39A5Q6ZMH5 540 aa11.5□□□□□ -0.57
CNKSR1-209ENST00000524529 CCDC129Q6ZRS4 1044 aa11.5□□□□□ -0.57
CNKSR1-209ENST00000524529 POTEDQ86YR6 584 aa11.5□□□□□ -0.57
CNKSR1-209ENST00000524529 LRRC47Q8N1G4 583 aaKnown RBP11.5□□□□□ -0.57
CNKSR1-209ENST00000524529 MKL1Q969V6 931 aa11.5□□□□□ -0.57
CNKSR1-209ENST00000524529 LENG1Q96BZ8 264 aaPredicted RBP11.5□□□□□ -0.57
CNKSR1-209ENST00000524529 CCDC136Q96JN2 1154 aa11.5□□□□□ -0.57
CNKSR1-209ENST00000524529 FGD4Q96M96 766 aa11.5□□□□□ -0.57
CNKSR1-209ENST00000524529 SLF1Q9BQI6 1058 aa11.5□□□□□ -0.57
CNKSR1-209ENST00000524529 TINF2Q9BSI4 451 aa11.5□□□□□ -0.57
CNKSR1-209ENST00000524529 INCENPQ9NQS7 918 aa11.5□□□□□ -0.57
CNKSR1-209ENST00000524529 MTMR4Q9NYA4 1195 aa11.5□□□□□ -0.57
CNKSR1-209ENST00000524529 PLIN4Q96Q06 1357 aa11.5□□□□□ -0.57
CNKSR1-209ENST00000524529 DNAJC25-GNG10A0A024R161 153 aa11.49□□□□□ -0.57
CNKSR1-209ENST00000524529 APPP05067 770 aa11.49□□□□□ -0.57
CNKSR1-209ENST00000524529 NUCB1Q02818 461 aa11.49□□□□□ -0.57
CNKSR1-209ENST00000524529 SNRNP48Q6IEG0 339 aaKnown RBP11.49□□□□□ -0.57
CNKSR1-209ENST00000524529 CENPQQ7L2Z9 268 aaPredicted RBP11.49□□□□□ -0.57
CNKSR1-209ENST00000524529 SH3RF1Q7Z6J0 888 aa11.49□□□□□ -0.57
CNKSR1-209ENST00000524529 NEDD1Q8NHV4 660 aa11.49□□□□□ -0.57
CNKSR1-209ENST00000524529 FERMT2Q96AC1 680 aa11.49□□□□□ -0.57
CNKSR1-209ENST00000524529 LNPKQ9C0E8 428 aa11.49□□□□□ -0.57
CNKSR1-209ENST00000524529 SLC5A4Q9NY91 659 aa11.49□□□□□ -0.57
CNKSR1-209ENST00000524529 DIS3Q9Y2L1 958 aaKnown RBP11.49□□□□□ -0.57
CNKSR1-209ENST00000524529 ATP2A1O14983 1001 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 SNAI1O95863 264 aaPredicted RBP11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 PGK1P00558 417 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 MYCNP04198 464 aaPredicted RBP11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 MX1P20591 662 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 ADCYAP1R1P41586 468 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 IRX5P78411 483 aaPredicted RBP11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 PPARAQ07869 468 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 KCTD2Q14681 263 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 TRIM60Q495X7 471 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 VPS53Q5VIR6 699 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 B4GALNT3Q6L9W6 998 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 RASGRP2Q7LDG7 609 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 CHD1LQ86WJ1 897 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 ZNF444Q8N0Y2 327 aaPredicted RBP11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 CPXCR1Q8N123 301 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 PRPF38AQ8NAV1 312 aaKnown RBP11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 ARRDC4Q8NCT1 418 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 FSD1Q9BTV5 496 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 TEX13BQ9BXU2 312 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 SLC38A10Q9HBR0 1119 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 RAVER2Q9HCJ3 691 aaKnown RBP11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 ATP11BQ9Y2G3 1177 aa11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.48□□□□□ -0.57
CNKSR1-209ENST00000524529 LRRC37A2A6NM11 1700 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 TRIM43BA6NCK2 446 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 KBTBD13C9JR72 458 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 ERC2O15083 957 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 ADCY6O43306 1168 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 ADAMTS4O75173 837 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 ITGB8P26012 769 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 CTDSPL2Q05D32 466 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 GPR153Q6NV75 609 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 DEFB123Q8N688 67 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 GMCL1P1Q8NEA9 526 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 KIFC2Q96AC6 838 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 TRIM43Q96BQ3 446 aaPredicted RBP11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 CHMP4CQ96CF2 233 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 PDLIM7Q9NR12 457 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 IL17RBQ9NRM6 502 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 NRBP1Q9UHY1 535 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 PHF24Q9UPV7 400 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 MYO9BQ13459 2157 aa11.47□□□□□ -0.57
CNKSR1-209ENST00000524529 ZNF536O15090 1300 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 MYADML2A6NDP7 307 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 NMT2O60551 498 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 TTLL1O95922 423 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 TSPY3P0CV98 308 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 TSPY8P0CW00 308 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 RARBP10826 455 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 COPB2P35606 906 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 SLC4A3P48751 1232 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 TFAP4Q01664 338 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 C1orf53Q5VUE5 145 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 SLFN13Q68D06 897 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 MAMDC4Q6UXC1 1216 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 NAPBQ9H115 298 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 XPNPEP3Q9NQH7 507 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 MTMR10Q9NXD2 777 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 SYNPO2Q9UMS6 1093 aa11.46□□□□□ -0.57
CNKSR1-209ENST00000524529 SYNGAP1Q96PV0 1343 aa11.45□□□□□ -0.58
CNKSR1-209ENST00000524529 A0A1W2PQ45 241 aaPredicted RBP11.45□□□□□ -0.58
CNKSR1-209ENST00000524529 A0A1W2PQY0 241 aa11.45□□□□□ -0.58
CNKSR1-209ENST00000524529 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
CNKSR1-209ENST00000524529 BMP3P12645 472 aa11.45□□□□□ -0.58
CNKSR1-209ENST00000524529 AKR1A1P14550 325 aa11.45□□□□□ -0.58
CNKSR1-209ENST00000524529 PDE1AP54750 535 aa11.45□□□□□ -0.58
CNKSR1-209ENST00000524529 TLE2Q04725 743 aa11.45□□□□□ -0.58
CNKSR1-209ENST00000524529 C9orf50Q5SZB4 431 aa11.45□□□□□ -0.58
CNKSR1-209ENST00000524529 CCSAPQ6IQ19 270 aaPredicted RBP11.45□□□□□ -0.58
CNKSR1-209ENST00000524529 KLHDC9Q8NEP7 349 aa11.45□□□□□ -0.58
CNKSR1-209ENST00000524529 BADQ92934 168 aa11.45□□□□□ -0.58
CNKSR1-209ENST00000524529 NACAP1Q9BZK3 213 aa11.45□□□□□ -0.58
CNKSR1-209ENST00000524529 KATNBL1Q9H079 304 aa11.45□□□□□ -0.58
CNKSR1-209ENST00000524529 FEM1BQ9UK73 627 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms