RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 IFIT2P09913 472 aaKnown RBP7.24□□□□□ -1.25
FAM49B-228ENST00000523993 GUCY1A2P33402 732 aa7.24□□□□□ -1.25
FAM49B-228ENST00000523993 ADD2P35612 726 aa7.24□□□□□ -1.25
FAM49B-228ENST00000523993 PLCD1P51178 756 aa7.24□□□□□ -1.25
FAM49B-228ENST00000523993 USP14P54578 494 aa7.24□□□□□ -1.25
FAM49B-228ENST00000523993 IRX3P78415 501 aaPredicted RBP7.24□□□□□ -1.25
FAM49B-228ENST00000523993 SEMA3FQ13275 785 aa7.24□□□□□ -1.25
FAM49B-228ENST00000523993 UBE3CQ15386 1083 aa7.24□□□□□ -1.25
FAM49B-228ENST00000523993 SHROOM1Q2M3G4 852 aaPredicted RBP7.24□□□□□ -1.25
FAM49B-228ENST00000523993 CERKLQ49MI3 558 aaPredicted RBP7.24□□□□□ -1.25
FAM49B-228ENST00000523993 ANKLE1Q8NAG6 615 aa7.24□□□□□ -1.25
FAM49B-228ENST00000523993 CRNKL1Q9BZJ0 848 aaKnown RBP7.24□□□□□ -1.25
FAM49B-228ENST00000523993 UNC93B1Q9H1C4 597 aa7.24□□□□□ -1.25
FAM49B-228ENST00000523993 TXNRD2Q9NNW7 524 aa7.24□□□□□ -1.25
FAM49B-228ENST00000523993 DCP1AQ9NPI6 582 aaPredicted RBP7.24□□□□□ -1.25
FAM49B-228ENST00000523993 ATP8A2Q9NTI2 1148 aa7.24□□□□□ -1.25
FAM49B-228ENST00000523993 PAG1Q9NWQ8 432 aa7.24□□□□□ -1.25
FAM49B-228ENST00000523993 SAP30BPQ9UHR5 308 aaKnown RBP7.24□□□□□ -1.25
FAM49B-228ENST00000523993 LAMA2P24043 3122 aaKnown RBP7.24□□□□□ -1.25
FAM49B-228ENST00000523993 SMCHD1A6NHR9 2005 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 USP17L15C9J2P7 530 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 USP17L13C9JLJ4 530 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 USP17L11C9JVI0 530 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 USP17L18D6R9N7 530 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 USP17L22D6RA61 530 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 USP17L17D6RBQ6 530 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 USP17L19D6RCP7 530 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 USP17L20D6RJB6 530 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 GOLIM4O00461 696 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 IGHA2P01877 340 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 HMGCRP04035 888 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 ELNP15502 786 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 MAPK4P31152 587 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 ERVK-9P63128 1117 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 ERVK-24P63145 666 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 USP17L24Q0WX57 530 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 NR6A1Q15406 480 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 ABCB5Q2M3G0 1257 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 PROX2Q3B8N5 592 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 Q3C1V9 767 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 HABP4Q5JVS0 413 aaKnown RBP7.23□□□□□ -1.25
FAM49B-228ENST00000523993 MORN1Q5T089 497 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 C20orf194Q5TEA3 1177 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 CATSPERGQ6ZRH7 1159 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 TRMT44Q8IYL2 757 aaKnown RBP7.23□□□□□ -1.25
FAM49B-228ENST00000523993 GPRC5AQ8NFJ5 357 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 SOCS4Q8WXH5 440 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 LRRCC1Q9C099 1032 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.23□□□□□ -1.25
FAM49B-228ENST00000523993 PRO3102Q9H379 93 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 DCTPP1Q9H773 170 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 SWAP70Q9UH65 585 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 GNEQ9Y223 722 aaKnown RBP7.23□□□□□ -1.25
FAM49B-228ENST00000523993 RABGAP1Q9Y3P9 1069 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 RPTORQ8N122 1335 aa7.23□□□□□ -1.25
FAM49B-228ENST00000523993 ATP9BO43861 1147 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 CNMDO75829 334 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 POLR3DP05423 398 aaPredicted RBP7.22□□□□□ -1.25
FAM49B-228ENST00000523993 HOXC6P09630 235 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 VCAM1P19320 739 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 C12orf60Q5U649 245 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 B4GALNT3Q6L9W6 998 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 GPR153Q6NV75 609 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 TMEM179Q6ZVK1 233 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 LCORLQ8N3X6 602 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 SDR42E1Q8WUS8 393 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 TRIB2Q92519 343 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 EDC3Q96F86 508 aaKnown RBP7.22□□□□□ -1.25
FAM49B-228ENST00000523993 DNAJC2Q99543 621 aaKnown RBP7.22□□□□□ -1.25
FAM49B-228ENST00000523993 NUDT12Q9BQG2 462 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 HTATIP2Q9BUP3 242 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 CABP5Q9NP86 173 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 MCM9Q9NXL9 1143 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 BIN2Q9UBW5 565 aaPredicted RBP7.22□□□□□ -1.25
FAM49B-228ENST00000523993 COL6A3P12111 3177 aa7.22□□□□□ -1.25
FAM49B-228ENST00000523993 A0A1W2PRG0 241 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 H0YGN5 161 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 FARP2O94887 1054 aaPredicted RBP7.21□□□□□ -1.26
FAM49B-228ENST00000523993 MYCP01106 439 aaPredicted RBP7.21□□□□□ -1.26
FAM49B-228ENST00000523993 CCNA1P78396 465 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 LSM11P83369 360 aaKnown RBP eCLIP7.21□□□□□ -1.26
FAM49B-228ENST00000523993 RAB3GAP1Q15042 981 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 ZSCAN25Q6NSZ9 544 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 GIMAP6Q6P9H5 292 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 C16orf86Q6ZW13 317 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 GPR142Q7Z601 462 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 SIAH1Q8IUQ4 282 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 ACER1Q8TDN7 264 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 LPAR1Q92633 364 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 CCDC17Q96LX7 622 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 DEFB118Q96PH6 123 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.21□□□□□ -1.268e-9■■■■□ 19.6
FAM49B-228ENST00000523993 PORCNQ9H237 461 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 BOLA2Q9H3K6 86 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 ECHDC1Q9NTX5 307 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 PLA2G2EQ9NZK7 142 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 OGDHLQ9ULD0 1010 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 ZMIZ1Q9ULJ6 1067 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 ADAMTS5Q9UNA0 930 aa7.21□□□□□ -1.26
FAM49B-228ENST00000523993 TMX2Q9Y320 296 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms