RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 IL17RBQ9NRM6 502 aa20.39■□□□□ 0.85
CCNC-213ENST00000523541 STX8Q9UNK0 236 aa20.39■□□□□ 0.85
CCNC-213ENST00000523541 DIS3Q9Y2L1 958 aaKnown RBP20.39■□□□□ 0.85
CCNC-213ENST00000523541 EVI5O60447 810 aa20.38■□□□□ 0.85
CCNC-213ENST00000523541 MSCO60682 206 aa20.38■□□□□ 0.85
CCNC-213ENST00000523541 CCND3P30281 292 aaPredicted RBP20.38■□□□□ 0.85
CCNC-213ENST00000523541 SLC4A3P48751 1232 aa20.38■□□□□ 0.85
CCNC-213ENST00000523541 RCSD1Q6JBY9 416 aa20.38■□□□□ 0.85
CCNC-213ENST00000523541 NUP88Q99567 741 aaPredicted RBP20.38■□□□□ 0.85
CCNC-213ENST00000523541 OGDHLQ9ULD0 1010 aa20.38■□□□□ 0.85
CCNC-213ENST00000523541 A0A0G2JMZ2 1700 aa20.37■□□□□ 0.85
CCNC-213ENST00000523541 SLC1A4P43007 532 aa20.37■□□□□ 0.85
CCNC-213ENST00000523541 CCDC178Q5BJE1 867 aa20.37■□□□□ 0.85
CCNC-213ENST00000523541 LRRC47Q8N1G4 583 aaKnown RBP20.37■□□□□ 0.85
CCNC-213ENST00000523541 DIS3LQ8TF46 1054 aaKnown RBP20.37■□□□□ 0.85
CCNC-213ENST00000523541 RUFY2Q8WXA3 655 aa20.37■□□□□ 0.85
CCNC-213ENST00000523541 SLC38A10Q9HBR0 1119 aa20.37■□□□□ 0.85
CCNC-213ENST00000523541 INCENPQ9NQS7 918 aa20.37■□□□□ 0.85
CCNC-213ENST00000523541 TOMM22Q9NS69 142 aa20.37■□□□□ 0.85
CCNC-213ENST00000523541 STAT2P52630 851 aa20.36■□□□□ 0.85
CCNC-213ENST00000523541 KCTD2Q14681 263 aa20.36■□□□□ 0.85
CCNC-213ENST00000523541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.36■□□□□ 0.85
CCNC-213ENST00000523541 NPLOC4Q8TAT6 608 aa20.36■□□□□ 0.85
CCNC-213ENST00000523541 ESR2Q92731 530 aa20.36■□□□□ 0.85
CCNC-213ENST00000523541 NBPF3Q9H094 633 aa20.36■□□□□ 0.85
CCNC-213ENST00000523541 FBXO40Q9UH90 709 aa20.36■□□□□ 0.85
CCNC-213ENST00000523541 NRBP1Q9UHY1 535 aa20.36■□□□□ 0.85
CCNC-213ENST00000523541 TACC3Q9Y6A5 838 aa20.36■□□□□ 0.85
CCNC-213ENST00000523541 RAD50Q92878 1312 aa20.35■□□□□ 0.85
CCNC-213ENST00000523541 COBLO75128 1261 aa20.35■□□□□ 0.85
CCNC-213ENST00000523541 TOP1P11387 765 aaKnown RBP20.35■□□□□ 0.85
CCNC-213ENST00000523541 CYP2C19P33261 490 aa20.35■□□□□ 0.85
CCNC-213ENST00000523541 IMMTQ16891 758 aaKnown RBP20.35■□□□□ 0.85
CCNC-213ENST00000523541 KIFC2Q96AC6 838 aa20.35■□□□□ 0.85
CCNC-213ENST00000523541 MMP19Q99542 508 aa20.35■□□□□ 0.85
CCNC-213ENST00000523541 FLRT1Q9NZU1 646 aa20.35■□□□□ 0.85
CCNC-213ENST00000523541 TMEM232C9JQI7 657 aa20.34■□□□□ 0.85
CCNC-213ENST00000523541 GSPT1P15170 499 aaKnown RBP20.34■□□□□ 0.85
CCNC-213ENST00000523541 MCCP23508 829 aa20.34■□□□□ 0.85
CCNC-213ENST00000523541 IKQ13123 557 aaPredicted RBP20.34■□□□□ 0.85
CCNC-213ENST00000523541 LHX8Q68G74 356 aa20.34■□□□□ 0.85
CCNC-213ENST00000523541 MSL3Q8N5Y2 521 aaKnown RBP20.34■□□□□ 0.85
CCNC-213ENST00000523541 CHST13Q8NET6 341 aa20.34■□□□□ 0.85
CCNC-213ENST00000523541 DCAF4Q8WV16 495 aa20.34■□□□□ 0.85
CCNC-213ENST00000523541 CHMP4CQ96CF2 233 aa20.34■□□□□ 0.85
CCNC-213ENST00000523541 C11orf49Q9H6J7 331 aa20.34■□□□□ 0.85
CCNC-213ENST00000523541 ZNF236Q9UL36 1845 aa20.34■□□□□ 0.85
CCNC-213ENST00000523541 MYH4Q9Y623 1939 aa20.33■□□□□ 0.85
CCNC-213ENST00000523541 HAND2P61296 217 aa20.33■□□□□ 0.85
CCNC-213ENST00000523541 RRP12Q5JTH9 1297 aaKnown RBP20.33■□□□□ 0.85
CCNC-213ENST00000523541 HABP4Q5JVS0 413 aaKnown RBP20.33■□□□□ 0.85
CCNC-213ENST00000523541 SNRNP48Q6IEG0 339 aaKnown RBP20.33■□□□□ 0.85
CCNC-213ENST00000523541 CHRDL2Q6WN34 429 aa20.33■□□□□ 0.85
CCNC-213ENST00000523541 DGKHQ86XP1 1220 aa20.33■□□□□ 0.85
CCNC-213ENST00000523541 MAML3Q96JK9 1138 aa20.33■□□□□ 0.85
CCNC-213ENST00000523541 COLQQ9Y215 455 aaPredicted RBP20.33■□□□□ 0.85
CCNC-213ENST00000523541 NMT2O60551 498 aa20.32■□□□□ 0.84
CCNC-213ENST00000523541 SLC34A2O95436 690 aa20.32■□□□□ 0.84
CCNC-213ENST00000523541 ZNF792Q3KQV3 632 aa20.32■□□□□ 0.84
CCNC-213ENST00000523541 TKFCQ3LXA3 575 aa20.32■□□□□ 0.84
CCNC-213ENST00000523541 IQCA1Q86XH1 822 aa20.32■□□□□ 0.84
CCNC-213ENST00000523541 CPXCR1Q8N123 301 aa20.32■□□□□ 0.84
CCNC-213ENST00000523541 TMEM47Q9BQJ4 181 aa20.32■□□□□ 0.84
CCNC-213ENST00000523541 CNNM2Q9H8M5 875 aa20.32■□□□□ 0.84
CCNC-213ENST00000523541 COL11A1P12107 1806 aaPredicted RBP20.32■□□□□ 0.84
CCNC-213ENST00000523541 MYCNP04198 464 aaPredicted RBP20.31■□□□□ 0.84
CCNC-213ENST00000523541 CHMLP26374 656 aa20.31■□□□□ 0.84
CCNC-213ENST00000523541 BTNL9Q6UXG8 535 aa20.31■□□□□ 0.84
CCNC-213ENST00000523541 C7orf61Q8IZ16 206 aa20.31■□□□□ 0.84
CCNC-213ENST00000523541 KRT23Q9C075 422 aa20.31■□□□□ 0.84
CCNC-213ENST00000523541 DDX20Q9UHI6 824 aaKnown RBP20.31■□□□□ 0.84
CCNC-213ENST00000523541 PNMA2Q9UL42 364 aa20.31■□□□□ 0.84
CCNC-213ENST00000523541 MTMR7Q9Y216 660 aa20.31■□□□□ 0.84
CCNC-213ENST00000523541 PARP14Q460N5 1801 aa20.31■□□□□ 0.84
CCNC-213ENST00000523541 CYBAP13498 195 aa20.3■□□□□ 0.84
CCNC-213ENST00000523541 CENPQQ7L2Z9 268 aaPredicted RBP20.3■□□□□ 0.84
CCNC-213ENST00000523541 ZNF467Q7Z7K2 595 aaPredicted RBP20.3■□□□□ 0.84
CCNC-213ENST00000523541 TBC1D10CQ8IV04 446 aa20.3■□□□□ 0.84
CCNC-213ENST00000523541 ANKS1AQ92625 1134 aa20.3■□□□□ 0.84
CCNC-213ENST00000523541 DDX11Q96FC9 970 aa20.3■□□□□ 0.84
CCNC-213ENST00000523541 RIPK3Q9Y572 518 aa20.3■□□□□ 0.84
CCNC-213ENST00000523541 DNAJC25-GNG10A0A024R161 153 aa20.29■□□□□ 0.84
CCNC-213ENST00000523541 SEPT4O43236 478 aa20.29■□□□□ 0.84
CCNC-213ENST00000523541 PGK2P07205 417 aa20.29■□□□□ 0.84
CCNC-213ENST00000523541 TINF2Q9BSI4 451 aa20.29■□□□□ 0.84
CCNC-213ENST00000523541 RAVER2Q9HCJ3 691 aaKnown RBP20.29■□□□□ 0.84
CCNC-213ENST00000523541 MNX1P50219 401 aaPredicted RBP20.28■□□□□ 0.84
CCNC-213ENST00000523541 MAMDC4Q6UXC1 1216 aa20.28■□□□□ 0.84
CCNC-213ENST00000523541 KCTD1Q719H9 257 aa20.28■□□□□ 0.84
CCNC-213ENST00000523541 ARRDC4Q8NCT1 418 aa20.28■□□□□ 0.84
CCNC-213ENST00000523541 PRR12Q9ULL5 1215 aa20.28■□□□□ 0.84
CCNC-213ENST00000523541 SNHG28P0DPA3 235 aa20.27■□□□□ 0.84
CCNC-213ENST00000523541 GPATCH4Q5T3I0 446 aaKnown RBP20.27■□□□□ 0.84
CCNC-213ENST00000523541 ANO1Q5XXA6 986 aa20.27■□□□□ 0.84
CCNC-213ENST00000523541 ANKRD35Q8N283 1001 aa20.27■□□□□ 0.84
CCNC-213ENST00000523541 U3KPZ7 1027 aaPredicted RBP20.27■□□□□ 0.84
CCNC-213ENST00000523541 SYNGAP1Q96PV0 1343 aa20.27■□□□□ 0.83
CCNC-213ENST00000523541 SGSM2O43147 1006 aa20.26■□□□□ 0.83
CCNC-213ENST00000523541 KDM4AO75164 1064 aa20.26■□□□□ 0.83
CCNC-213ENST00000523541 COL6A1P12109 1028 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms