RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 PCDHA4Q9UN74 947 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 RFX7Q2KHR2 1363 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 FER1L4A9Z1Z3 1794 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 FLOT1O75955 427 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 CYP4A11Q02928 519 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 CKAP4Q07065 602 aaKnown RBP14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 IFFO1Q0D2I5 559 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 DPCR1Q3MIW9 517 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 EAPPQ56P03 285 aaPredicted RBP14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 GPBP1Q86WP2 473 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 TTLL6Q8N841 843 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 SPATA31A5Q5VU36 1347 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 SPATA31A7Q8IWB4 1347 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 ZNF609O15014 1411 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 PPP6R2O75170 966 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 IRX3P78415 501 aaPredicted RBP14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 DNAI2Q9GZS0 605 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 MRPL44Q9H9J2 332 aaKnown RBP14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 TESPA1A2RU30 521 aaPredicted RBP14.58□□□□□ -0.07
PCDHGB1-201ENST00000523390 CCDC66A2RUB6 948 aa14.58□□□□□ -0.07
PCDHGB1-201ENST00000523390 FAM196BA6NMK8 535 aa14.58□□□□□ -0.07
PCDHGB1-201ENST00000523390 PRPF3O43395 683 aaKnown RBP14.58□□□□□ -0.07
PCDHGB1-201ENST00000523390 PXDNQ92626 1479 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 ADKP55263 362 aaKnown RBP14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 BIRC3Q13489 604 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 DCAF15Q66K64 600 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 SYNCQ9H7C4 482 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 ZDHHC9Q9Y397 364 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 TMEM110-MUSTN1A8MSY1 372 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 COBLO75128 1261 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 SMTNP53814 917 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 UBXN2AP68543 259 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 GPSM2P81274 684 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 MIGA2Q7L4E1 593 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 VTI1AQ96AJ9 217 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 PAGR1Q9BTK6 254 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 PI4KBQ9UBF8 816 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 GCOM1H8Y6P7 765 aaPredicted RBP14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 GTPBP6O43824 516 aaPredicted RBP14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 NEBLO76041 1014 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 POLR2MP0CAP2 368 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 ENAHQ8N8S7 591 aaPredicted RBP14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 TBCKQ8TEA7 893 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 MRPL11Q9Y3B7 192 aaKnown RBP14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 CSADQ9Y600 493 aa14.58□□□□□ -0.08
PCDHGB1-201ENST00000523390 RPAP1Q9BWH6 1393 aaPredicted RBP14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 GJC1P36383 396 aa14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 SPECC1LQ69YQ0 1117 aa14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 C11orf57Q6ZUT1 292 aaPredicted RBP14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 DPH6Q7L8W6 267 aa14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 DGKHQ86XP1 1220 aa14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 FAM207AQ9NSI2 230 aaPredicted RBP14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 BCCIPQ9P287 314 aaKnown RBP eCLIP14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 IMPACTQ9P2X3 320 aa14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 GINS2Q9Y248 185 aa14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 TUBB4AP04350 444 aa14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 LONP1P36776 959 aaKnown RBP14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 SLC27A3Q5K4L6 730 aa14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 TAF6LQ9Y6J9 622 aa14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 UTYO14607 1347 aa14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 ZNF500O60304 480 aaPredicted RBP14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 NTSR2O95665 410 aa14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 TRAPPC10P48553 1259 aa14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 DHX36Q9H2U1 1008 aaKnown RBP14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 SLC39A2Q9NP94 309 aa14.57□□□□□ -0.08
PCDHGB1-201ENST00000523390 NOP56O00567 594 aaKnown RBP14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 EXOC3O60645 756 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 MAPK8IP2Q13387 824 aaPredicted RBP14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 TRIM14Q14142 442 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 SF3B3Q15393 1217 aaKnown RBP14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 SMYD4Q8IYR2 804 aaPredicted RBP14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 CCPG1Q9ULG6 757 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 IVNS1ABPQ9Y6Y0 642 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 ARHGAP6O43182 974 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 CDC27P30260 824 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 MCM6Q14566 821 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 ALX1Q15699 326 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 NLRX1Q86UT6 975 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 RDH13Q8NBN7 331 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 LY9Q9HBG7 655 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 ARFGAP3Q9NP61 516 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 NLRC4Q9NPP4 1024 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 PODXL2Q9NZ53 605 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 SORBS3O60504 671 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 TMTC3Q6ZXV5 915 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 MIER3Q7Z3K6 550 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 PLA2G4DQ86XP0 818 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 FNBP1Q96RU3 617 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 TDRD3Q9H7E2 651 aaKnown RBP14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 PCDHB13Q9Y5F0 798 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 ANKRD62A6NC57 917 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 CALUO43852 315 aaPredicted RBP14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 RPN1P04843 607 aaKnown RBP14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 PRR5LQ6MZQ0 368 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 IFT74Q96LB3 600 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 SLF1Q9BQI6 1058 aa14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 CCDC94Q9BW85 323 aaPredicted RBP14.56□□□□□ -0.08
PCDHGB1-201ENST00000523390 KDM3AQ9Y4C1 1321 aa14.55□□□□□ -0.08
PCDHGB1-201ENST00000523390 RHOXF2BP0C7M4 288 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms