RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 SYNRGQ9UMZ2 1314 aa27.31■■□□□ 1.96
PVT1-218ENST00000523328 MCM3APO60318 1980 aa27.31■■□□□ 1.96
PVT1-218ENST00000523328 SNAI1O95863 264 aaPredicted RBP27.3■■□□□ 1.96
PVT1-218ENST00000523328 ACLYP53396 1101 aa27.3■■□□□ 1.96
PVT1-218ENST00000523328 CCSAPQ6IQ19 270 aaPredicted RBP27.3■■□□□ 1.96
PVT1-218ENST00000523328 KLHDC9Q8NEP7 349 aa27.3■■□□□ 1.96
PVT1-218ENST00000523328 NUP88Q99567 741 aaPredicted RBP27.3■■□□□ 1.96
PVT1-218ENST00000523328 RIPK3Q9Y572 518 aa27.3■■□□□ 1.96
PVT1-218ENST00000523328 TTC28Q96AY4 2481 aa27.29■■□□□ 1.96
PVT1-218ENST00000523328 MAMDC4Q6UXC1 1216 aa27.29■■□□□ 1.96
PVT1-218ENST00000523328 SLF1Q9BQI6 1058 aa27.29■■□□□ 1.96
PVT1-218ENST00000523328 TEX13BQ9BXU2 312 aa27.29■■□□□ 1.96
PVT1-218ENST00000523328 STARD7Q9NQZ5 370 aa27.29■■□□□ 1.96
PVT1-218ENST00000523328 SYNGAP1Q96PV0 1343 aa27.29■■□□□ 1.96
PVT1-218ENST00000523328 MYH4Q9Y623 1939 aa27.29■■□□□ 1.96
PVT1-218ENST00000523328 DNAJC25-GNG10A0A024R161 153 aa27.28■■□□□ 1.96
PVT1-218ENST00000523328 MS4A1P11836 297 aa27.28■■□□□ 1.96
PVT1-218ENST00000523328 SNRNP48Q6IEG0 339 aaKnown RBP27.28■■□□□ 1.96
PVT1-218ENST00000523328 ARPP21Q9UBL0 812 aaPredicted RBP27.28■■□□□ 1.96
PVT1-218ENST00000523328 FAM184BQ9ULE4 1060 aa27.28■■□□□ 1.96
PVT1-218ENST00000523328 DDX19BQ9UMR2 479 aa27.28■■□□□ 1.96
PVT1-218ENST00000523328 MOXD2PA6NHM9 499 aa27.27■■□□□ 1.96
PVT1-218ENST00000523328 DCDC2CA8MYV0 355 aa27.27■■□□□ 1.96
PVT1-218ENST00000523328 RASA1P20936 1047 aa27.27■■□□□ 1.96
PVT1-218ENST00000523328 NUP133Q8WUM0 1156 aa27.27■■□□□ 1.96
PVT1-218ENST00000523328 NYAP2Q9P242 653 aa27.27■■□□□ 1.96
PVT1-218ENST00000523328 COG6Q9Y2V7 657 aa27.27■■□□□ 1.96
PVT1-218ENST00000523328 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.26■■□□□ 1.95
PVT1-218ENST00000523328 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.26■■□□□ 1.95
PVT1-218ENST00000523328 MYADML2A6NDP7 307 aa27.26■■□□□ 1.95
PVT1-218ENST00000523328 DNAJB2P25686 324 aa27.26■■□□□ 1.95
PVT1-218ENST00000523328 GRIN2CQ14957 1233 aa27.26■■□□□ 1.95
PVT1-218ENST00000523328 KCNA10Q16322 511 aa27.26■■□□□ 1.95
PVT1-218ENST00000523328 TBX21Q9UL17 535 aa27.26■■□□□ 1.95
PVT1-218ENST00000523328 F5H6K3 240 aa27.25■■□□□ 1.95
PVT1-218ENST00000523328 ATP2A1O14983 1001 aa27.25■■□□□ 1.95
PVT1-218ENST00000523328 DUSP11O75319 330 aaKnown RBP27.25■■□□□ 1.95
PVT1-218ENST00000523328 NDUFB10O96000 172 aa27.25■■□□□ 1.95
PVT1-218ENST00000523328 TIMP1P01033 207 aa27.25■■□□□ 1.95
PVT1-218ENST00000523328 KLRC3Q07444 240 aa27.25■■□□□ 1.95
PVT1-218ENST00000523328 SBK1Q52WX2 424 aa27.25■■□□□ 1.95
PVT1-218ENST00000523328 ZSCAN25Q6NSZ9 544 aa27.25■■□□□ 1.95
PVT1-218ENST00000523328 PRPF38AQ8NAV1 312 aaKnown RBP27.25■■□□□ 1.95
PVT1-218ENST00000523328 DDX11Q96FC9 970 aa27.25■■□□□ 1.95
PVT1-218ENST00000523328 STRBPQ96SI9 672 aaKnown RBP27.25■■□□□ 1.95
PVT1-218ENST00000523328 ZHX1Q9UKY1 873 aaPredicted RBP27.25■■□□□ 1.95
PVT1-218ENST00000523328 ADCY6O43306 1168 aa27.24■■□□□ 1.95
PVT1-218ENST00000523328 CST5P28325 142 aaPredicted RBP27.24■■□□□ 1.95
PVT1-218ENST00000523328 IRX5P78411 483 aaPredicted RBP27.24■■□□□ 1.95
PVT1-218ENST00000523328 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.24■■□□□ 1.95
PVT1-218ENST00000523328 ZNF467Q7Z7K2 595 aaPredicted RBP27.24■■□□□ 1.95
PVT1-218ENST00000523328 GSG1L2A8MUP6 293 aa27.23■■□□□ 1.95
PVT1-218ENST00000523328 FGD4Q96M96 766 aa27.23■■□□□ 1.95
PVT1-218ENST00000523328 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.23■■□□□ 1.95
PVT1-218ENST00000523328 MYO9BQ13459 2157 aa27.22■■□□□ 1.95
PVT1-218ENST00000523328 ELP1O95163 1332 aa27.22■■□□□ 1.95
PVT1-218ENST00000523328 CDK7P50613 346 aa27.22■■□□□ 1.95
PVT1-218ENST00000523328 CPXCR1Q8N123 301 aa27.22■■□□□ 1.95
PVT1-218ENST00000523328 STK11IPQ8N1F8 1099 aa27.22■■□□□ 1.95
PVT1-218ENST00000523328 USP38Q8NB14 1042 aa27.22■■□□□ 1.95
PVT1-218ENST00000523328 IGKV6D-41A0A0C4DH26 115 aa27.21■■□□□ 1.95
PVT1-218ENST00000523328 ACVR2BQ13705 512 aa27.21■■□□□ 1.95
PVT1-218ENST00000523328 MFSD5Q6N075 450 aa27.21■■□□□ 1.95
PVT1-218ENST00000523328 GIMAP6Q6P9H5 292 aa27.21■■□□□ 1.95
PVT1-218ENST00000523328 C16orf59Q7L2K0 433 aa27.21■■□□□ 1.95
PVT1-218ENST00000523328 GLT1D1Q96MS3 346 aa27.21■■□□□ 1.95
PVT1-218ENST00000523328 UPF3AQ9H1J1 476 aaKnown RBP27.21■■□□□ 1.95
PVT1-218ENST00000523328 ZNF576Q9H609 170 aa27.21■■□□□ 1.95
PVT1-218ENST00000523328 MKNK2Q9HBH9 465 aa27.21■■□□□ 1.95
PVT1-218ENST00000523328 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.21■■□□□ 1.95
PVT1-218ENST00000523328 MROH7Q68CQ1 1323 aa27.2■■□□□ 1.95
PVT1-218ENST00000523328 ASGR1P07306 291 aa27.2■■□□□ 1.94
PVT1-218ENST00000523328 C6orf222P0C671 652 aaPredicted RBP27.2■■□□□ 1.94
PVT1-218ENST00000523328 SLC4A3P48751 1232 aa27.2■■□□□ 1.94
PVT1-218ENST00000523328 ABHD16BQ9H3Z7 469 aa27.2■■□□□ 1.94
PVT1-218ENST00000523328 SLC38A10Q9HBR0 1119 aa27.2■■□□□ 1.94
PVT1-218ENST00000523328 RAVER2Q9HCJ3 691 aaKnown RBP27.2■■□□□ 1.94
PVT1-218ENST00000523328 CLIP2Q9UDT6 1046 aa27.2■■□□□ 1.94
PVT1-218ENST00000523328 MUC3AQ02505 3323 aa27.19■■□□□ 1.94
PVT1-218ENST00000523328 SMARCA5O60264 1052 aaPredicted RBP27.19■■□□□ 1.94
PVT1-218ENST00000523328 ZBED4O75132 1171 aa27.19■■□□□ 1.94
PVT1-218ENST00000523328 GJA9P57773 515 aa27.19■■□□□ 1.94
PVT1-218ENST00000523328 CCDC144BQ3MJ40 725 aa27.19■■□□□ 1.94
PVT1-218ENST00000523328 PCSK9Q8NBP7 692 aaKnown RBP27.19■■□□□ 1.94
PVT1-218ENST00000523328 SYMPKQ92797 1274 aaKnown RBP27.19■■□□□ 1.94
PVT1-218ENST00000523328 TIFAQ96CG3 184 aa27.19■■□□□ 1.94
PVT1-218ENST00000523328 LRRCC1Q9C099 1032 aa27.19■■□□□ 1.94
PVT1-218ENST00000523328 PRDM6Q9NQX0 595 aa27.19■■□□□ 1.94
PVT1-218ENST00000523328 MINDY4BA8MYZ0 360 aa27.18■■□□□ 1.94
PVT1-218ENST00000523328 TMEM240Q5SV17 173 aa27.18■■□□□ 1.94
PVT1-218ENST00000523328 RASIP1Q5U651 963 aa27.18■■□□□ 1.94
PVT1-218ENST00000523328 OSBP2Q969R2 916 aa27.18■■□□□ 1.94
PVT1-218ENST00000523328 MKL1Q969V6 931 aa27.18■■□□□ 1.94
PVT1-218ENST00000523328 KIFC2Q96AC6 838 aa27.18■■□□□ 1.94
PVT1-218ENST00000523328 EPB41L4AQ9HCS5 686 aaPredicted RBP27.18■■□□□ 1.94
PVT1-218ENST00000523328 ARVCFO00192 962 aa27.17■■□□□ 1.94
PVT1-218ENST00000523328 PPIGQ13427 754 aaKnown RBP eCLIP27.17■■□□□ 1.94
PVT1-218ENST00000523328 ARMCX2Q7L311 632 aa27.17■■□□□ 1.94
PVT1-218ENST00000523328 ANKRD35Q8N283 1001 aa27.17■■□□□ 1.94
PVT1-218ENST00000523328 KATNBL1Q9H079 304 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms