RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 H0YC42 278 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 PMS1P54277 932 aaKnown RBP13.55□□□□□ -0.24
EXTL3-214ENST00000523271 PATL1Q86TB9 770 aaKnown RBP13.55□□□□□ -0.24
EXTL3-214ENST00000523271 ZBTB12Q9Y330 459 aaPredicted RBP13.55□□□□□ -0.24
EXTL3-214ENST00000523271 N4BP1O75113 896 aaKnown RBP13.55□□□□□ -0.24
EXTL3-214ENST00000523271 SEPT2Q15019 361 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 CERS3Q8IU89 383 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 TTC21BQ7Z4L5 1316 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 MYCT1Q8N699 235 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 NFKBIL1Q9UBC1 381 aaPredicted RBP13.55□□□□□ -0.24
EXTL3-214ENST00000523271 NAIPQ13075 1403 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 NESP48681 1621 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 FAM135AQ9P2D6 1515 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 POLR2DO15514 142 aaKnown RBP13.55□□□□□ -0.24
EXTL3-214ENST00000523271 EXOC3O60645 756 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 ATP1A2P50993 1020 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 SLMAPQ14BN4 828 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 NCAPH2Q6IBW4 605 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 ING2Q9H160 280 aa13.55□□□□□ -0.24
EXTL3-214ENST00000523271 TNNI1P19237 187 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 KLC3Q6P597 504 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 TRIM45Q9H8W5 580 aaPredicted RBP13.54□□□□□ -0.24
EXTL3-214ENST00000523271 CHEK2O96017 543 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 ZCRB1Q8TBF4 217 aaKnown RBP13.54□□□□□ -0.24
EXTL3-214ENST00000523271 GFM2Q969S9 779 aaKnown RBP13.54□□□□□ -0.24
EXTL3-214ENST00000523271 KCNH3Q9ULD8 1083 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 FANCCQ00597 558 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 PDE1BQ01064 536 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 A6NJR5 290 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 F8W031 263 aaPredicted RBP13.54□□□□□ -0.24
EXTL3-214ENST00000523271 PUM3Q15397 648 aaKnown RBP13.54□□□□□ -0.24
EXTL3-214ENST00000523271 OTUD6AQ7L8S5 288 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 ZBTB3Q9H5J0 574 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 KIF17Q9P2E2 1029 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 TRIM27P14373 513 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 NSFP46459 744 aaKnown RBP13.54□□□□□ -0.24
EXTL3-214ENST00000523271 LRRC8BQ6P9F7 803 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 MRPL40Q9NQ50 206 aaKnown RBP13.54□□□□□ -0.24
EXTL3-214ENST00000523271 TRPC5Q9UL62 973 aaPredicted RBP13.54□□□□□ -0.24
EXTL3-214ENST00000523271 IVNS1ABPQ9Y6Y0 642 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 GSNP06396 782 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 DYNC1I2Q13409 638 aaKnown RBP13.54□□□□□ -0.24
EXTL3-214ENST00000523271 ARHGEF18Q6ZSZ5 1173 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 N4BP2L2Q92802 583 aaPredicted RBP13.54□□□□□ -0.24
EXTL3-214ENST00000523271 MTBPQ96DY7 904 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 TRAIPQ9BWF2 469 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 INTS9Q9NV88 658 aaKnown RBP13.54□□□□□ -0.24
EXTL3-214ENST00000523271 STX18Q9P2W9 335 aaKnown RBP13.54□□□□□ -0.24
EXTL3-214ENST00000523271 ZNF212Q9UDV6 495 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 TTC41PQ6P2S7 1318 aa13.54□□□□□ -0.24
EXTL3-214ENST00000523271 CFAP43Q8NDM7 1665 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 PRR23D1E9PI22 279 aaPredicted RBP13.53□□□□□ -0.24
EXTL3-214ENST00000523271 KDM1AO60341 852 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 DEXIO95424 95 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 PRR23D2P0DMB1 279 aaPredicted RBP13.53□□□□□ -0.24
EXTL3-214ENST00000523271 XRCC5P13010 732 aaKnown RBP13.53□□□□□ -0.24
EXTL3-214ENST00000523271 SLC12A1Q13621 1099 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 DHX32Q7L7V1 743 aaKnown RBP13.53□□□□□ -0.24
EXTL3-214ENST00000523271 NAF1Q96HR8 494 aaKnown RBP13.53□□□□□ -0.24
EXTL3-214ENST00000523271 KCNK3O14649 394 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 SDSP20132 328 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 KLHL29Q96CT2 875 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 ST7Q9NRC1 585 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 PTPDC1A2A3K4 754 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 ZNF280CQ8ND82 737 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 TMEM259Q4ZIN3 620 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 SNX5Q9Y5X3 404 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 KDM3AQ9Y4C1 1321 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 RASGRF2O14827 1237 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 IL15P40933 162 aaPredicted RBP13.53□□□□□ -0.24
EXTL3-214ENST00000523271 CALCRLQ16602 461 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 CYB5RLQ6IPT4 315 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.53□□□□□ -0.24
EXTL3-214ENST00000523271 NLRP3Q96P20 1036 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 PDE6CP51160 858 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 MAGEB6Q8N7X4 407 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 UBN1Q9NPG3 1134 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 GINS2Q9Y248 185 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 CCDC61Q9Y6R9 512 aa13.53□□□□□ -0.24
EXTL3-214ENST00000523271 POGZQ7Z3K3 1410 aa13.52□□□□□ -0.24
EXTL3-214ENST00000523271 HOOK2Q96ED9 719 aa13.52□□□□□ -0.24
EXTL3-214ENST00000523271 SYTL2Q9HCH5 934 aa13.52□□□□□ -0.24
EXTL3-214ENST00000523271 STMN3Q9NZ72 180 aa13.52□□□□□ -0.24
EXTL3-214ENST00000523271 RAB3GAP1Q15042 981 aa13.52□□□□□ -0.24
EXTL3-214ENST00000523271 TYW1BQ6NUM6 668 aa13.52□□□□□ -0.24
EXTL3-214ENST00000523271 LLPHQ9BRT6 129 aaKnown RBP13.52□□□□□ -0.24
EXTL3-214ENST00000523271 CCDC78A2IDD5 438 aa13.52□□□□□ -0.25
EXTL3-214ENST00000523271 CUTAO60888 179 aa13.52□□□□□ -0.25
EXTL3-214ENST00000523271 SLC4A1P02730 911 aa13.52□□□□□ -0.25
EXTL3-214ENST00000523271 PPARGP37231 505 aaPredicted RBP13.52□□□□□ -0.25
EXTL3-214ENST00000523271 PPARDQ03181 441 aa13.52□□□□□ -0.25
EXTL3-214ENST00000523271 CCDC85BQ15834 202 aaPredicted RBP13.52□□□□□ -0.25
EXTL3-214ENST00000523271 PLEKHM3Q6ZWE6 761 aa13.52□□□□□ -0.25
EXTL3-214ENST00000523271 MYLK4Q86YV6 388 aaPredicted RBP13.52□□□□□ -0.25
EXTL3-214ENST00000523271 JDP2Q8WYK2 163 aa13.52□□□□□ -0.25
EXTL3-214ENST00000523271 CNOT10Q9H9A5 744 aaKnown RBP13.52□□□□□ -0.25
EXTL3-214ENST00000523271 FBXO2Q9UK22 296 aaPredicted RBP13.52□□□□□ -0.25
EXTL3-214ENST00000523271 MED21Q13503 144 aa13.52□□□□□ -0.25
EXTL3-214ENST00000523271 ZNF174Q15697 407 aa13.52□□□□□ -0.25
EXTL3-214ENST00000523271 LDHBP07195 334 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms