RNA–Protein interactions for RNA: ENST00000522246.5

CD74-208, Transcript of CD74 molecule, humanhuman

TSL 4

Gene CD74, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-208ENST00000522246 MMP1P03956 469 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 PTMSP20962 102 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 GNA11P29992 359 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 PPIL2Q13356 520 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 GNL2Q13823 731 aaKnown RBP12.22□□□□□ -0.45
CD74-208ENST00000522246 PKP1Q13835 747 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 FAM83BQ5T0W9 1011 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 MCTP1Q6DN14 999 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 TTBK2Q6IQ55 1244 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 PPP1R18Q6NYC8 613 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 DLK2Q6UY11 383 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 SPICE1Q8N0Z3 855 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 PRPF38AQ8NAV1 312 aaKnown RBP12.22□□□□□ -0.45
CD74-208ENST00000522246 BICD2Q8TD16 824 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 PIGSQ96S52 555 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 FOXP1Q9H334 677 aaPredicted RBP12.22□□□□□ -0.45
CD74-208ENST00000522246 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 BARHL2Q9NY43 387 aa12.22□□□□□ -0.45
CD74-208ENST00000522246 UBE2Q2LH0YL09 131 aa12.21□□□□□ -0.45
CD74-208ENST00000522246 CELF2O95319 508 aaKnown RBP12.21□□□□□ -0.45
CD74-208ENST00000522246 NLRP5P59047 1200 aa12.21□□□□□ -0.45
CD74-208ENST00000522246 MTMR2Q13614 643 aa12.21□□□□□ -0.45
CD74-208ENST00000522246 ZYXQ15942 572 aaKnown RBP12.21□□□□□ -0.45
CD74-208ENST00000522246 CSPP1Q1MSJ5 1256 aa12.21□□□□□ -0.45
CD74-208ENST00000522246 FASTKD5Q7L8L6 764 aaKnown RBP12.21□□□□□ -0.45
CD74-208ENST00000522246 ZNF396Q96N95 335 aaPredicted RBP12.21□□□□□ -0.45
CD74-208ENST00000522246 PHF20Q9BVI0 1012 aa12.21□□□□□ -0.45
CD74-208ENST00000522246 AMNQ9BXJ7 453 aa12.21□□□□□ -0.45
CD74-208ENST00000522246 ELP3Q9H9T3 547 aa12.21□□□□□ -0.45
CD74-208ENST00000522246 C6orf50Q9HD87 102 aa12.21□□□□□ -0.45
CD74-208ENST00000522246 HOXC10Q9NYD6 342 aa12.21□□□□□ -0.45
CD74-208ENST00000522246 PRR12Q9ULL5 1215 aa12.21□□□□□ -0.45
CD74-208ENST00000522246 FZD1Q9UP38 647 aa12.21□□□□□ -0.45
CD74-208ENST00000522246 hCG_1642624A0A1W2PR95 340 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 ESYT2A0FGR8 921 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 TRIM75PA6NK02 468 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 USP17L15C9J2P7 530 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 USP17L13C9JLJ4 530 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 USP17L11C9JVI0 530 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 USP17L18D6R9N7 530 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 USP17L22D6RA61 530 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 USP17L17D6RBQ6 530 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 USP17L19D6RCP7 530 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 USP17L20D6RJB6 530 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 TRAF5O00463 557 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 DTNBO60941 627 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 U2AF2P26368 475 aaKnown RBP eCLIP12.2□□□□□ -0.46
CD74-208ENST00000522246 KRT2P35908 639 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 SLC16A2P36021 539 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 GUCY1B3Q02153 619 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 USP17L24Q0WX57 530 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 PABPC4Q13310 644 aaKnown RBP eCLIP12.2□□□□□ -0.46
CD74-208ENST00000522246 SLC35G1Q2M3R5 365 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 KIAA1755Q5JYT7 1200 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 MCTP2Q6DN12 878 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 HEATR3Q7Z4Q2 680 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 CCDC84Q86UT8 332 aaPredicted RBP12.2□□□□□ -0.46
CD74-208ENST00000522246 HOMER1Q86YM7 354 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 PROCA1Q8NCQ7 364 aaPredicted RBP12.2□□□□□ -0.46
CD74-208ENST00000522246 PIBF1Q8WXW3 757 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 AIFM3Q96NN9 605 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 NUP88Q99567 741 aaPredicted RBP12.2□□□□□ -0.46
CD74-208ENST00000522246 SLF1Q9BQI6 1058 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 ZNF408Q9H9D4 720 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 VPS54Q9P1Q0 977 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.2□□□□□ -0.46
CD74-208ENST00000522246 CFAP45Q9UL16 551 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 KCNH4Q9UQ05 1017 aa12.2□□□□□ -0.46
CD74-208ENST00000522246 CTDP1Q9Y5B0 961 aaPredicted RBP12.2□□□□□ -0.46
CD74-208ENST00000522246 A0A0G2JLL6 359 aaPredicted RBP12.19□□□□□ -0.46
CD74-208ENST00000522246 STXBP3O00186 592 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 ZBED4O75132 1171 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 BAG4O95429 457 aaKnown RBP12.19□□□□□ -0.46
CD74-208ENST00000522246 VCAM1P19320 739 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 MRPL12P52815 198 aaKnown RBP12.19□□□□□ -0.46
CD74-208ENST00000522246 FOSBP53539 338 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 HMGCS2P54868 508 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 NAPAP54920 295 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 KIF23Q02241 960 aaPredicted RBP12.19□□□□□ -0.46
CD74-208ENST00000522246 RESTQ13127 1097 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 COG2Q14746 738 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 CDC37Q16543 378 aaPredicted RBP12.19□□□□□ -0.46
CD74-208ENST00000522246 FOXD4L5Q5VV16 416 aaPredicted RBP12.19□□□□□ -0.46
CD74-208ENST00000522246 WWC2Q6AWC2 1192 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 OTUD7BQ6GQQ9 843 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 PRRT2Q7Z6L0 340 aaPredicted RBP12.19□□□□□ -0.46
CD74-208ENST00000522246 FBXO11Q86XK2 927 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 DIS3L2Q8IYB7 885 aaKnown RBP12.19□□□□□ -0.46
CD74-208ENST00000522246 DAGLBQ8NCG7 672 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 SMC1BQ8NDV3 1235 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 FOXD4L4Q8WXT5 416 aaPredicted RBP12.19□□□□□ -0.46
CD74-208ENST00000522246 TANGO6Q9C0B7 1094 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 ZMYND12Q9H0C1 365 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 RANBP17Q9H2T7 1088 aaKnown RBP12.19□□□□□ -0.46
CD74-208ENST00000522246 CPVLQ9H3G5 476 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 RPAP3Q9H6T3 665 aaPredicted RBP12.19□□□□□ -0.46
CD74-208ENST00000522246 PCDHA4Q9UN74 947 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 PCDHA1Q9Y5I3 950 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 PAPPA2Q9BXP8 1791 aa12.19□□□□□ -0.46
CD74-208ENST00000522246 PHIPQ8WWQ0 1821 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms