RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 SYNGAP1Q96PV0 1343 aa13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 CHD7Q9P2D1 2997 aa13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 MOXD2PA6NHM9 499 aa13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 RAB11FIP3O75154 756 aa13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 DUSP11O75319 330 aaKnown RBP13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 CHGBP05060 677 aa13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 DNAJB2P25686 324 aa13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 KCNA10Q16322 511 aa13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 FAM83BQ5T0W9 1011 aa13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 MFSD5Q6N075 450 aa13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 SAMD1Q6SPF0 538 aaPredicted RBP13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 ZNF467Q7Z7K2 595 aaPredicted RBP13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 LENG1Q96BZ8 264 aaPredicted RBP13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 TEX13BQ9BXU2 312 aa13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 NYAP2Q9P242 653 aa13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 ELP1O95163 1332 aa13.84□□□□□ -0.19
IGHV3-60-201ENST00000521678 CST5P28325 142 aaPredicted RBP13.83□□□□□ -0.2
IGHV3-60-201ENST00000521678 NKX3-2P78367 333 aa13.83□□□□□ -0.2
IGHV3-60-201ENST00000521678 SBK1Q52WX2 424 aa13.83□□□□□ -0.2
IGHV3-60-201ENST00000521678 PRPF38AQ8NAV1 312 aaKnown RBP13.83□□□□□ -0.2
IGHV3-60-201ENST00000521678 USP38Q8NB14 1042 aa13.83□□□□□ -0.2
IGHV3-60-201ENST00000521678 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.83□□□□□ -0.2
IGHV3-60-201ENST00000521678 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.83□□□□□ -0.2
IGHV3-60-201ENST00000521678 BOLA2Q9H3K6 86 aa13.83□□□□□ -0.2
IGHV3-60-201ENST00000521678 ZNF576Q9H609 170 aa13.83□□□□□ -0.2
IGHV3-60-201ENST00000521678 STARD7Q9NQZ5 370 aa13.83□□□□□ -0.2
IGHV3-60-201ENST00000521678 ZBTB40Q9NUA8 1239 aa13.83□□□□□ -0.2
IGHV3-60-201ENST00000521678 SYNRGQ9UMZ2 1314 aa13.83□□□□□ -0.2
IGHV3-60-201ENST00000521678 ZNFX1Q9P2E3 1918 aaKnown RBP13.82□□□□□ -0.2
IGHV3-60-201ENST00000521678 NCOR1O75376 2440 aa13.82□□□□□ -0.2
IGHV3-60-201ENST00000521678 F5H6K3 240 aa13.82□□□□□ -0.2
IGHV3-60-201ENST00000521678 KLRC3Q07444 240 aa13.82□□□□□ -0.2
IGHV3-60-201ENST00000521678 TJAP1Q5JTD0 557 aa13.82□□□□□ -0.2
IGHV3-60-201ENST00000521678 TMEM240Q5SV17 173 aa13.82□□□□□ -0.2
IGHV3-60-201ENST00000521678 AMOTL1Q8IY63 956 aa13.82□□□□□ -0.2
IGHV3-60-201ENST00000521678 MKL1Q969V6 931 aa13.82□□□□□ -0.2
IGHV3-60-201ENST00000521678 FGD4Q96M96 766 aa13.82□□□□□ -0.2
IGHV3-60-201ENST00000521678 SLF1Q9BQI6 1058 aa13.82□□□□□ -0.2
IGHV3-60-201ENST00000521678 PUS7LQ9H0K6 701 aaKnown RBP13.82□□□□□ -0.2
IGHV3-60-201ENST00000521678 UPF3AQ9H1J1 476 aaKnown RBP13.82□□□□□ -0.2
IGHV3-60-201ENST00000521678 SLC4A4Q9Y6R1 1079 aa13.82□□□□□ -0.2
IGHV3-60-201ENST00000521678 NAV1Q8NEY1 1877 aa13.82□□□□□ -0.2
IGHV3-60-201ENST00000521678 MYADML2A6NDP7 307 aa13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 CTAGE5O15320 804 aa13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 HMMRO75330 724 aa13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 RASA1P20936 1047 aa13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 GJA9P57773 515 aa13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 ACVR2BQ13705 512 aa13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 SNRNP48Q6IEG0 339 aaKnown RBP13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 GIMAP6Q6P9H5 292 aa13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 PCSK9Q8NBP7 692 aaKnown RBP13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 TIFAQ96CG3 184 aa13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 DDX11Q96FC9 970 aa13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 DDRGK1Q96HY6 314 aa13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 STRBPQ96SI9 672 aaKnown RBP13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 NUP88Q99567 741 aaPredicted RBP13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 ABHD16BQ9H3Z7 469 aa13.81□□□□□ -0.2
IGHV3-60-201ENST00000521678 IGKV6D-41A0A0C4DH26 115 aa13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 GSG1L2A8MUP6 293 aa13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 ARVCFO00192 962 aa13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 APBB1O00213 710 aa13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 ADCY6O43306 1168 aa13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 NDUFB10O96000 172 aa13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 IRX5P78411 483 aaPredicted RBP13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 PPIGQ13427 754 aaKnown RBP eCLIP13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 AKNAD1Q5T1N1 836 aa13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 GLT1D1Q96MS3 346 aa13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 KATNBL1Q9H079 304 aa13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 SLC38A10Q9HBR0 1119 aa13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 MROH7Q68CQ1 1323 aa13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 PARP14Q460N5 1801 aa13.8□□□□□ -0.2
IGHV3-60-201ENST00000521678 TRANK1O15050 2925 aa13.79□□□□□ -0.2
IGHV3-60-201ENST00000521678 ZBED4O75132 1171 aa13.79□□□□□ -0.2
IGHV3-60-201ENST00000521678 ASGR1P07306 291 aa13.79□□□□□ -0.2
IGHV3-60-201ENST00000521678 MS4A1P11836 297 aa13.79□□□□□ -0.2
IGHV3-60-201ENST00000521678 CCDC144BQ3MJ40 725 aa13.79□□□□□ -0.2
IGHV3-60-201ENST00000521678 ZSCAN25Q6NSZ9 544 aa13.79□□□□□ -0.2
IGHV3-60-201ENST00000521678 SLC43A3Q8NBI5 491 aa13.79□□□□□ -0.2
IGHV3-60-201ENST00000521678 PBX4Q9BYU1 374 aa13.79□□□□□ -0.2
IGHV3-60-201ENST00000521678 ARPP21Q9UBL0 812 aaPredicted RBP13.79□□□□□ -0.2
IGHV3-60-201ENST00000521678 ZHX1Q9UKY1 873 aaPredicted RBP13.79□□□□□ -0.2
IGHV3-60-201ENST00000521678 SYNPO2Q9UMS6 1093 aa13.79□□□□□ -0.2
IGHV3-60-201ENST00000521678 GRXCR1A8MXD5 290 aa13.78□□□□□ -0.2
IGHV3-60-201ENST00000521678 CD4P01730 458 aa13.78□□□□□ -0.2
IGHV3-60-201ENST00000521678 C6orf222P0C671 652 aaPredicted RBP13.78□□□□□ -0.2
IGHV3-60-201ENST00000521678 CSF2RAP15509 400 aa13.78□□□□□ -0.2
IGHV3-60-201ENST00000521678 PBX2P40425 430 aa13.78□□□□□ -0.2
IGHV3-60-201ENST00000521678 OAZ1P54368 228 aa13.78□□□□□ -0.2
IGHV3-60-201ENST00000521678 GNASQ5JWF2 1037 aa13.78□□□□□ -0.2
IGHV3-60-201ENST00000521678 CCDC174Q6PII3 467 aa13.78□□□□□ -0.2
IGHV3-60-201ENST00000521678 ZNF365Q70YC5 407 aa13.78□□□□□ -0.2
IGHV3-60-201ENST00000521678 FAM126BQ8IXS8 530 aa13.78□□□□□ -0.2
IGHV3-60-201ENST00000521678 CHST13Q8NET6 341 aa13.78□□□□□ -0.2
IGHV3-60-201ENST00000521678 ATXN2LQ8WWM7 1075 aaKnown RBP13.78□□□□□ -0.2
IGHV3-60-201ENST00000521678 SPC25Q9HBM1 224 aa13.78□□□□□ -0.2
IGHV3-60-201ENST00000521678 FBXO40Q9UH90 709 aa13.78□□□□□ -0.2
IGHV3-60-201ENST00000521678 A0A0U1RQG5 324 aaPredicted RBP13.77□□□□□ -0.21
IGHV3-60-201ENST00000521678 TNFRSF10AO00220 468 aa13.77□□□□□ -0.21
IGHV3-60-201ENST00000521678 RAD21O60216 631 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms